Import Geant4 10.5.0 source tree
This commit is contained in:
Gabriele Cosmo
+143
@@ -0,0 +1,143 @@
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# G.A.P.Cirrone
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#
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# Default macro file. It is called if no argument is provided at run
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#
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# i.e. simply typing $G4WORKDIR/bin/Linux-++/Hadrontherapy <no argument here!>
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#
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# This macro can be used for a proton beam in water. Both electrmagnetic and
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# hadronic models are swiched on
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#########################
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# Set of the verboses
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#
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/control/verbose 1
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/tracking/verbose 0
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/run/verbose 1
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/event/verbose 0
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##########################
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# Set of the physic models
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#
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/Physics/addPhysics QGSP_BIC_EMY
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/run/numberOfThreads 4
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##########################
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# INFN-LNS transport beam line,
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# normally used for interdisciplinary
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# researches with carbon and
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# and other ion beams is activated
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# with the following command
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#
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/geometrySetup/selectGeometry Carbon
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##########################
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# Initialisation procedure
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#
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/run/initialize
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##########################
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# Visualisation
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#
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#/vis/open OGLI 600x600-0+0
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# Disable auto refresh and quieten vis messages whilst scene and
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# trajectories are established:
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#/vis/viewer/set/autoRefresh false
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#/vis/verbose errors
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#/vis/drawVolume
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#/vis/viewer/set/viewpointThetaPhi 30 140 deg
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#/vis/viewer/zoom 1
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#/vis/viewer/pan -10 0 cm
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#/vis/scene/add/trajectories smooth
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#/vis/scene/endOfEventAction accumulate
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#/vis/viewer/set/autoRefresh true
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#/vis/verbose warnings
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##########################
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# Set here the cut and the step max for the tracking.
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# Suggested values of cut and step:
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# Set cuts OUTSIDE the detector
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/run/setCut 10 mm
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# Set cuts ONLY inside the detector
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#
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/run/setCutForRegion DetectorLog 0.1 mm
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/Step/waterPhantomStepMax 0.1 mm
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##########################################################################################################
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# PRIMARY PARTICLES
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# the beam spot is centered at the origin and is
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# of 1d gaussian shape with a 3mm central plateau
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#
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#---------------------------gps-----------------
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/gps/pos/shape Circle
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/gps/pos/centre -80. 0. 0. mm
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/gps/pos/radius 0. mm
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/gps/pos/sigma_r 2. mm
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/gps/particle ion
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/gps/ion 6 12 6
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/gps/pos/type Beam
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# the incident surface is in the y-z plane
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/gps/pos/rot1 0 1 0
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/gps/pos/rot2 0 0 1
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# the beam is travelling along the x-axis without any angular dispersion (angular despersion set to 0.0)
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#
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/gps/ang/rot1 0 0 1
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/gps/ang/rot2 0 1 0
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/gps/ang/type beam1d
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/gps/ang/sigma_r 0. deg
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# the beam energy is in gaussian profile
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#
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/gps/ene/type Gauss
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/gps/ene/mono 744 MeV
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/gps/ene/sigma 0.740 MeV
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# Voxelised detector
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/changePhantom/size 40 40 40 cm
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/changePhantom/position 20 0 0 cm
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/changeDetector/size 4 4 4 cm
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/changeDetector/voxelSize .1 40 40 mm
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# Put the detector in the lower left corner of the phantom
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/changeDetector/displacement 0 18 18 cm
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/changePhantom/update
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/changeTheSource/VirtualLayer true
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/changeTheSource/VirtualLayerPosition -4 0 0 cm
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/primaryParticleData/NewSource true
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/primaryParticleData/calculatedPhaseSpaceFileIN Layer_TuttaLinea.txt
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#########################
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# Display the event number
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# during the run
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#
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/run/printProgress 1000
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# Compute Dose and Fluence for secondary
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#/analysis/secondary true
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#########################
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# Start of the run
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#
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#########################
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/run/beamOn 1
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@@ -1,11 +0,0 @@
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# GNUmakefile for macro directory, Gillis Danielsen
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all:
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make doc
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doc:
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doxygen ./configureDoxygen
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viewdoc:
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make doc
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firefox ../../hadrontherapyDoxygen/html/index.html
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@@ -1,30 +0,0 @@
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#
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# This file permits to customize, with commands,
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# the menu bar of the G4UIXm, G4UIWin32 sessions.
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# It has no effect with G4UIterminal.
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# File :
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/gui/addMenu file File
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/gui/addButton file Continue continue
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/gui/addButton file Exit "exit"
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#
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# Run menu :
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/gui/addMenu run Run
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/gui/addButton run "beamOn 1" "/run/beamOn 1"
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/gui/addButton run "beamOn 10" "/run/beamOn 10"
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/gui/addButton run "beamOn 100" "/run/beamOn 100"
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/gui/addButton run run1 "/control/execute defaultMacro.mac"
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#
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# Gps menu :
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/gui/addMenu gps Particle
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/gui/addButton gps "Proton" "/gps/particle proton"
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/gui/addMenu gps Energy
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/gui/addButton gps "15 MeV" "/gps/energy 15 MeV"
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/gui/addButton gps "30 MeV" "/gps/energy 30 MeV"
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/gui/addButton gps "60 MeV" "/gps/energy 60 MeV"
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#
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# Macro menu
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/gui/addMenu control "Macro"
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/gui/addButton control "Hadron-therapy" "/control/execute macro/hadron_therapy.mac"
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@@ -0,0 +1,39 @@
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/Physics/addPhysics QGSP_BIC_EMY
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/geometrySetup/selectGeometry Carbon
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/run/initialize
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/run/setCut 1 mm
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/run/setCutForRegion DetectorLog 1 km
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/Step/waterPhantomStepMax 10 um
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/gps/particle ion
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/gps/ion 6 12 6
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/gps/position 0. 0. 0. cm
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/gps/ene/type Gauss
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/gps/ene/mono 2244 MeV
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/gps/direction 1 0 0
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/changePhantom/size 40 40 40 cm
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/changePhantom/position 20 0 0 cm
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/changePhantom/material G4_WATER
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/changeDetector/voxelSize .02 40 40 mm
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/changeDetector/size 120 40 40 mm
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/changeDetector/displacement 0 18 18 cm # With respect to the phantom
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/changePhantom/update
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/event/printEventNumber 100
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### RBE (CHO cell line)
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/rbe/calculation 1
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/rbe/verbose 2
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/rbe/loadLemTable data/rbe/CHOScholz1997_LEM.csv
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/rbe/cellLine CHO
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/rbe/doseScale 320000
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# Dose scale should be: 2e7 / nEvents * voxelSizeInCm2
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/run/printProgress 100
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/run/beamOn 1000
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@@ -0,0 +1,3 @@
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# macro to be run in loop
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/modulator/angle 1 deg
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/run/beamOn 100
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@@ -0,0 +1,89 @@
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/Physics/addPhysics QGSP_BIC_EMY
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# /geometrySetup/selectGeometry Carbon
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/run/initialize
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/run/setCut 1 mm
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/run/setCutForRegion DetectorLog 1 km
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/Step/waterPhantomStepMax 10 um
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# /gps/particle proton
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# /gps/pos/centre 0. 0. 0. cm
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# /gps/pos/type Beam
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# /gps/pos/rot1 0 1 0
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# /gps/pos/rot2 0 0 1
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# /gps/ene/type Gauss
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# /gps/ene/mono 62 MeV
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# /gps/direction 1 0 0
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#---------------------------gps-----------------
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/gps/pos/shape Circle
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/gps/pos/centre -310. 0. 0. cm
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/gps/pos/radius 0. mm
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/gps/pos/sigma_r 2.5 mm
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/gps/particle proton
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/gps/pos/type Beam
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/gps/pos/rot1 0 1 0
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/gps/pos/rot2 0 0 1
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/gps/ang/rot1 0 0 1
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/gps/ang/rot2 0 1 0
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/gps/ang/type beam1d
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/gps/ang/sigma_r 0. deg
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/gps/ene/type Gauss
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/gps/ene/mono 62 MeV
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/gps/ene/sigma 0.3 MeV
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#--------------detector and phantom-----------------
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/changePhantom/size 40 40 40 cm
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/changePhantom/position 20 0 0 cm
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/changePhantom/material G4_WATER
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/changeDetector/voxelSize .02 40 40 mm
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/changeDetector/size 120 40 40 mm
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/changeDetector/displacement 0 18 18 cm # With respect to the phantom
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/changePhantom/update
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# /score/create/boxMesh boxMesh_1
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# /score/mesh/translate/xyz 60. 20. 20. mm
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# /score/mesh/boxSize 60. 20. 20. mm
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# /score/mesh/nBin 6000 1 1
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# /score/quantity/doseDeposit dose
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# /score/close
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/event/printEventNumber 100
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### RBE
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/rbe/verbose 2
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/rbe/loadLemTable data/rbe/lem1.csv
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/rbe/calculation 1
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/rbe/accumulate 1
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## U87
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#/rbe/dcut 8.0 gray
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#/rbe/alphaX 0.11 gray(-1)
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#/rbe/betaX 0.06 gray(-2)
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#/rbe/lemTable data/rbe/U87_LEM.dat
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/rbe/cellLine U87
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## AG01522
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#/rbe/dcut 9.5 gray
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#/rbe/alphaX 0.54 gray(-1)
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#/rbe/betaX 0.062 gray(-2)
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#/rbe/lemTable data/rbe/AG01522_LEM.dat
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/rbe/doseScale 7777770
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# Dose scale should be: 2e7 / nEvents * voxelSizeInCm2
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/modulator/ReadData Modulators/Modulator010.txt
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/modulator/RMWMat G4_PLEXIGLASS
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/modulator/position -2160.5 30 50 mm
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/modulator/innerRadius 2.5 cm
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/modulator/outRadius 9.5 cm
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# Running in loop
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/control/alias initialValue 0
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/control/alias finalValue 360
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/control/alias stepSize 1
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/control/loop macro/RBE-62MeV-proton-modulator.loop counterName {initialValue} {finalValue} {stepSize}
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@@ -8,55 +8,41 @@
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#########################
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# Set of the verboses
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#
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/control/verbose 1
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/control/verbose 0
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/tracking/verbose 0
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/run/verbose 1
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/run/verbose 0
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/event/verbose 0
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##########################
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# Set of the physic models
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#
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#/Physics/addPhysics QGSP_BIC_EMY
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/Physics/addPhysics HADRONTHERAPY_1
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/run/numberOfThreads 4
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/run/numberOfThreads 1
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##########################
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# Initialisation procedure
|
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#
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/run/initialize
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##########################
|
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# Visualisation
|
||||
#
|
||||
/vis/open OGLI 600x600-0+0
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||||
|
||||
# Disable auto refresh and quieten vis messages whilst scene and
|
||||
# trajectories are established:
|
||||
/vis/viewer/set/autoRefresh false
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#/vis/verbose errors
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||||
|
||||
/vis/drawVolume
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/vis/viewer/set/viewpointThetaPhi 30 140 deg
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#/vis/viewer/zoom 1
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#/vis/viewer/pan -10 0 cm
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/vis/scene/add/trajectories smooth
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/vis/scene/endOfEventAction accumulate
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/vis/viewer/set/autoRefresh true
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/vis/verbose warnings
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####################################################
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# Set here the CUT and the STEP MAX for the tracking.
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# Suggested values of cut and step
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#
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# Set cuts OUTSIDE the detector
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#
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/run/setCut 1 mm
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/run/setCut 1 m
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# Set cuts ONLY inside the detector
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#
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/run/setCutForRegion DetectorLog 0.1 mm
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|
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/Step/waterPhantomStepMax 0.1 mm
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|
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/run/setCutForAGivenParticle e- 0.1 mm
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/run/setCutForAGivenParticle e+ 0.1 mm
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/run/setCutForAGivenParticle proton 0.1 mm
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#/Step/waterPhantomStepMax 0.1 mm
|
||||
|
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#########################
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# Set the primary particle type,
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@@ -69,6 +55,8 @@
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/gps/pos/radius 0. mm
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/gps/pos/sigma_r 2. mm
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/gps/particle proton
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#/gps/particle ion
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#/gps/ion 6 12 6
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/gps/pos/type Beam
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|
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# the incident surface is in the y-z plane
|
||||
@@ -87,8 +75,10 @@
|
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# the beam energy is in gaussian profile
|
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#
|
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/gps/ene/type Gauss
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||||
/gps/ene/mono 62.4 MeV
|
||||
/gps/ene/sigma 0.25 MeV
|
||||
/gps/ene/mono 60.0 MeV
|
||||
#/gps/ene/sigma 0.25 MeV
|
||||
#/gps/ene/mono 744 MeV
|
||||
#/gps/ene/sigma 0.740 MeV
|
||||
|
||||
###################################################
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||||
# DETECTOR DESCRIPTION
|
||||
@@ -124,11 +114,12 @@
|
||||
# Start of the run
|
||||
#
|
||||
# If secondary particles dose & fluence are needed
|
||||
#/analysis/secondary true
|
||||
#/analysis/computeLet
|
||||
/analysis/secondary true
|
||||
/analysis/computeLet
|
||||
|
||||
# Default material is water liquid
|
||||
#/changePhantom/material G4_PLEXIGLASS
|
||||
/changePhantom/material G4_WATER
|
||||
|
||||
/run/printProgress 1000
|
||||
/run/beamOn 100000
|
||||
/run/beamOn 1000
|
||||
/tracking/verbose 0
|
||||
@@ -0,0 +1,144 @@
|
||||
# G.A.P.Cirrone,
|
||||
# pablo.cirrone@lns.infn.it
|
||||
#
|
||||
# Default macro file. It is called if no argument is provided at run
|
||||
# and when the PHYSLIST enviroment variable is OFF
|
||||
# i.e. simply typing $G4WORKDIR/bin/Linux-++/Hadrontherapy <no argument here!>
|
||||
|
||||
#########################
|
||||
# Set of the verboses
|
||||
#
|
||||
/control/verbose 0
|
||||
/tracking/verbose 0
|
||||
/run/verbose 0
|
||||
/event/verbose 0
|
||||
|
||||
##########################
|
||||
# Set of the physic models
|
||||
#
|
||||
#/Physics/addPhysics QGSP_BIC_EMY
|
||||
|
||||
/Physics/addPhysics HADRONTHERAPY_1
|
||||
/run/numberOfThreads 1
|
||||
|
||||
##########################
|
||||
# Initialisation procedure
|
||||
#
|
||||
/run/initialize
|
||||
|
||||
##########################
|
||||
# Visualisation
|
||||
#
|
||||
/vis/open OGLI 600x600-0+0
|
||||
|
||||
# Disable auto refresh and quieten vis messages whilst scene and
|
||||
# trajectories are established:
|
||||
/vis/viewer/set/autoRefresh false
|
||||
/vis/verbose errors
|
||||
|
||||
/vis/drawVolume
|
||||
/vis/viewer/set/viewpointThetaPhi 30 140 deg
|
||||
/vis/viewer/zoom 1
|
||||
/vis/viewer/pan -10 0 cm
|
||||
/vis/scene/add/trajectories smooth
|
||||
/vis/scene/endOfEventAction accumulate
|
||||
/vis/viewer/set/autoRefresh true
|
||||
/vis/verbose warnings
|
||||
|
||||
####################################################
|
||||
# Set here the CUT and the STEP MAX for the tracking.
|
||||
# Suggested values of cut and step
|
||||
#
|
||||
# Set cuts OUTSIDE the detector
|
||||
#
|
||||
/run/setCut 1 m
|
||||
|
||||
# Set cuts ONLY inside the detector
|
||||
#
|
||||
/run/setCutForRegion DetectorLog 0.1 mm
|
||||
|
||||
|
||||
/run/setCutForAGivenParticle e- 0.1 mm
|
||||
/run/setCutForAGivenParticle e+ 0.1 mm
|
||||
/run/setCutForAGivenParticle proton 0.1 mm
|
||||
#/Step/waterPhantomStepMax 0.1 mm
|
||||
|
||||
#########################
|
||||
# Set the primary particle type,
|
||||
# energy and position along the X direction
|
||||
#
|
||||
|
||||
#---------------------------gps-----------------
|
||||
/gps/pos/shape Circle
|
||||
/gps/pos/centre -310. 0. 0. cm
|
||||
/gps/pos/radius 0. mm
|
||||
/gps/pos/sigma_r 2. mm
|
||||
/gps/particle proton
|
||||
#/gps/particle ion
|
||||
#/gps/ion 6 12 6
|
||||
/gps/pos/type Beam
|
||||
|
||||
# the incident surface is in the y-z plane
|
||||
#
|
||||
/gps/pos/rot1 0 1 0
|
||||
/gps/pos/rot2 0 0 1
|
||||
|
||||
# the beam is travelling along the x-axis without any angular dispersion (angular despersion set to 0.0)
|
||||
#
|
||||
|
||||
/gps/ang/rot1 0 0 1
|
||||
/gps/ang/rot2 0 1 0
|
||||
/gps/ang/type beam1d
|
||||
/gps/ang/sigma_r 0.028 deg
|
||||
|
||||
# the beam energy is in gaussian profile
|
||||
#
|
||||
/gps/ene/type Gauss
|
||||
/gps/ene/mono 60.0 MeV
|
||||
#/gps/ene/sigma 0.25 MeV
|
||||
#/gps/ene/mono 744 MeV
|
||||
#/gps/ene/sigma 0.740 MeV
|
||||
|
||||
###################################################
|
||||
# DETECTOR DESCRIPTION
|
||||
########################################################
|
||||
# USE THE FOLLOWING FOUR LINES FOR DEFINITION OF PHANTOM
|
||||
########################################################
|
||||
#
|
||||
#/changePhantom/position 20. 0. 0. cm
|
||||
#/changePhantom/update
|
||||
|
||||
/changePhantom/size 40 40 40 cm
|
||||
/changePhantom/position 20 0 0 cm
|
||||
|
||||
###################################################
|
||||
# USE THE FOLLOWING FOR A VOXELLIZED DETECTOR
|
||||
###################################################
|
||||
#
|
||||
/changeDetector/size 4 4 4 cm
|
||||
/changeDetector/voxelSize .1 40 40 mm
|
||||
|
||||
# Put the detector in the lower left corner of the phantom
|
||||
#
|
||||
/changeDetector/displacement 0 18 18 cm
|
||||
/changePhantom/update
|
||||
|
||||
#########################
|
||||
# Display the event number
|
||||
# during the run
|
||||
#
|
||||
/event/printEventNumber 100
|
||||
|
||||
#########################
|
||||
# Start of the run
|
||||
#
|
||||
# If secondary particles dose & fluence are needed
|
||||
/analysis/secondary true
|
||||
/analysis/computeLet
|
||||
|
||||
# Default material is water liquid
|
||||
/changePhantom/material G4_WATER
|
||||
|
||||
/run/printProgress 1000
|
||||
/run/beamOn 1000
|
||||
/tracking/verbose 0
|
||||
@@ -1,3 +1,3 @@
|
||||
# macro to be run in loop
|
||||
/modulator/angle 1 deg
|
||||
/run/beamOn 10
|
||||
/run/beamOn 100000
|
||||
|
||||
@@ -31,7 +31,9 @@
|
||||
##########################
|
||||
# Set of the physic models
|
||||
#
|
||||
/Physics/addPhysics QGSP_BIC_EMY
|
||||
/Physics/addPhysics HADRONTHERAPY_1
|
||||
/run/numberOfThreads 7
|
||||
|
||||
|
||||
##########################
|
||||
# Initialisation procedure
|
||||
@@ -41,17 +43,16 @@
|
||||
##########################
|
||||
# Visualisation
|
||||
#
|
||||
/vis/scene/create
|
||||
/vis/open OGLI
|
||||
/vis/viewer/flush
|
||||
/vis/viewer/set/viewpointThetaPhi 50 130 deg
|
||||
/vis/scene/add/axes 0 0 0 0.1 m
|
||||
/vis/viewer/zoom 1
|
||||
/vis/viewer/panTo -80 40 cm
|
||||
/vis/scene/add/trajectories
|
||||
/vis/viewer/update
|
||||
/vis/scene/endOfEventAction accumulate
|
||||
/vis/viewer/set/hiddenMarker 1
|
||||
#/vis/open OGLI 600x600-0+0
|
||||
#/vis/viewer/flush
|
||||
#/vis/viewer/set/viewpointThetaPhi 50 130 deg
|
||||
#/vis/scene/add/axes 0 0 0 0.1 m
|
||||
#/vis/viewer/zoom 1
|
||||
#/vis/viewer/panTo -80 40 cm
|
||||
#/vis/scene/add/trajectories
|
||||
#/vis/viewer/update
|
||||
#/vis/scene/endOfEventAction accumulate
|
||||
#/vis/viewer/set/hiddenMarker 1
|
||||
#########################
|
||||
# Set the primary particle type,
|
||||
# energy and position along the X direction
|
||||
@@ -91,9 +92,12 @@
|
||||
# Set here the cut and the step max for the tracking.
|
||||
# Suggested values of cut and step:
|
||||
#
|
||||
#/Physics/setDetectorCuts 0.001 mm
|
||||
#/Physics/setCuts 1 mm
|
||||
/Step/waterPhantomStepMax 0.005 mm
|
||||
/run/setCutForRegion DetectorLog 0.1 mm
|
||||
|
||||
# Cut for the rest of the volume
|
||||
/run/setCut 1 mm
|
||||
|
||||
#/Step/waterPhantomStepMax 0.1 mm
|
||||
|
||||
/changePhantom/size 40 40 40 cm
|
||||
/changePhantom/position 20 0 0 cm
|
||||
@@ -124,7 +128,15 @@
|
||||
/modulator/innerRadius 2.5 cm
|
||||
/modulator/outRadius 9.5 cm
|
||||
############################################################
|
||||
/event/printEventNumber 1000
|
||||
|
||||
#########################
|
||||
# Start of the run
|
||||
#
|
||||
# If secondary particles dose & fluence are needed
|
||||
/analysis/secondary true
|
||||
/analysis/computeLet
|
||||
|
||||
/run/printProgress 1000
|
||||
|
||||
# START OF THE MODULATOR ROTATION
|
||||
# IT CONSISTS IN A COMPLETE ROTATION
|
||||
|
||||
Reference in New Issue
Block a user