Armed with this wisdom, we attempt first to simply set the intercept equal to False in our implementation of Ridge regression for our well-known vanilla data set.

import numpy as np
import pandas as pd
import matplotlib.pyplot as plt
from sklearn.model_selection import train_test_split
from sklearn import linear_model

def MSE(y_data,y_model):
    n = np.size(y_model)
    return np.sum((y_data-y_model)**2)/n


# A seed just to ensure that the random numbers are the same for every run.
# Useful for eventual debugging.
np.random.seed(3155)

n = 100
x = np.random.rand(n)
y = np.exp(-x**2) + 1.5 * np.exp(-(x-2)**2)

Maxpolydegree = 20
X = np.zeros((n,Maxpolydegree))
#We include explicitely the intercept column
for degree in range(Maxpolydegree):
    X[:,degree] = x**degree
# We split the data in test and training data
X_train, X_test, y_train, y_test = train_test_split(X, y, test_size=0.2)

p = Maxpolydegree
I = np.eye(p,p)
# Decide which values of lambda to use
nlambdas = 6
MSEOwnRidgePredict = np.zeros(nlambdas)
MSERidgePredict = np.zeros(nlambdas)
lambdas = np.logspace(-4, 2, nlambdas)
for i in range(nlambdas):
    lmb = lambdas[i]
    OwnRidgeBeta = np.linalg.pinv(X_train.T @ X_train+lmb*I) @ X_train.T @ y_train
    # Note: we include the intercept column and no scaling
    RegRidge = linear_model.Ridge(lmb,fit_intercept=False)
    RegRidge.fit(X_train,y_train)
    # and then make the prediction
    ytildeOwnRidge = X_train @ OwnRidgeBeta
    ypredictOwnRidge = X_test @ OwnRidgeBeta
    ytildeRidge = RegRidge.predict(X_train)
    ypredictRidge = RegRidge.predict(X_test)
    MSEOwnRidgePredict[i] = MSE(y_test,ypredictOwnRidge)
    MSERidgePredict[i] = MSE(y_test,ypredictRidge)
    print("Beta values for own Ridge implementation")
    print(OwnRidgeBeta)
    print("Beta values for Scikit-Learn Ridge implementation")
    print(RegRidge.coef_)
    print("MSE values for own Ridge implementation")
    print(MSEOwnRidgePredict[i])
    print("MSE values for Scikit-Learn Ridge implementation")
    print(MSERidgePredict[i])

# Now plot the results
plt.figure()
plt.plot(np.log10(lambdas), MSEOwnRidgePredict, 'r', label = 'MSE own Ridge Test')
plt.plot(np.log10(lambdas), MSERidgePredict, 'g', label = 'MSE Ridge Test')

plt.xlabel('log10(lambda)')
plt.ylabel('MSE')
plt.legend()
plt.show()

The results here agree when we force Scikit-Learn's Ridge function to include the first column in our design matrix. We see that the results agree very well. Here we have thus explicitely included the intercept column in the design matrix. What happens if we do not include the intercept in our fit? Let us see how we can change this code by zero centering (thanks to Stian Bilek for inpouts here).

Code Examples