typo in decision tree
This commit is contained in:
@@ -297,7 +297,7 @@ MathJax.Hub.Config({
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<center>[2] <b>Department of Physics and Astronomy and National Superconducting Cyclotron Laboratory, Michigan State University</b></center>
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<br>
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<p>
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<center><h4>Dec 5, 2019</h4></center> <!-- date -->
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<center><h4>Dec 6, 2019</h4></center> <!-- date -->
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<br>
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<p>
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@@ -282,7 +282,7 @@ MathJax.Hub.Config({
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<p>
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Let us bring up our good old boostrap example from the linear regression lectures. We change the linerar regression algorithm with
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a decision tree wth different depths and perform a bootstrap aggregate (in this case we as many bootstraps as data points \( n \)).
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a decision tree wth different depths and perform a bootstrap aggregate (in this case we perform as many bootstraps as data points \( n \)).
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<p>
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<!-- code=python (!bc pycod) typeset with pygments style "default" -->
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@@ -315,7 +315,7 @@ bagged trees will look quite similar to each other. Hence the
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predictions from the bagged trees will be highly correlated.
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Unfortunately, averaging many highly correlated quantities does not
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lead to as large of a reduction in variance as averaging many
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uncorrelated quanti- ties. In particular, this means that bagging will
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uncorrelated quantities. In particular, this means that bagging will
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not lead to a substantial reduction in variance over a single tree in
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this setting.
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@@ -285,21 +285,21 @@ The algorithm described here can be applied to both classification and regressio
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We will grow of forest of say \( M \) trees.
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<ol>
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<li> For \( m=1:M \) we</li>
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<li> For \( b=1:B \)</li>
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<ul>
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<li> Draw a bootstrap sample of from the training data organized in our \( \boldsymbol{X} \) matrix.</li>
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<li> We grow then a random forest tree \( T_m \) based on the bootstrapped data by repeating the steps outlined till we reach the maximum node size is reached</li>
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<li> We grow then a random forest tree \( T_b \) based on the bootstrapped data by repeating the steps outlined till we reach the maximum node size is reached</li>
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<ol>
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<li> we select \( m \le p \) varibales at random from the \( p \) predictors/features</li>
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<li> we select \( m \le p \) variables at random from the \( p \) predictors/features</li>
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<li> pick the best split point among the \( m \) features using either the CART algorithm or the ID3 for classification and create a new node</li>
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<li> split the node into daughter nodes</li>
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</ol>
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</ul>
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<li> Output then the ensemble of trees \( \{T_m\}_1^{M} \) and make predictions for either a regression type of problem or a classification type of problem.</li>
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<li> Output then the ensemble of trees \( \{T_b\}_1^{B} \) and make predictions for either a regression type of problem or a classification type of problem.</li>
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</ol>
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<p>
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@@ -297,7 +297,7 @@ MathJax.Hub.Config({
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<center>[2] <b>Department of Physics and Astronomy and National Superconducting Cyclotron Laboratory, Michigan State University</b></center>
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<br>
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<p>
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<center><h4>Dec 5, 2019</h4></center> <!-- date -->
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<center><h4>Dec 6, 2019</h4></center> <!-- date -->
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<br>
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<p>
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@@ -148,7 +148,7 @@ MathJax.Hub.Config({
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<center>[2] <b>Department of Physics and Astronomy and National Superconducting Cyclotron Laboratory, Michigan State University</b></center>
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<br>
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<p> <br>
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<center><h4>Dec 5, 2019</h4></center> <!-- date -->
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<center><h4>Dec 6, 2019</h4></center> <!-- date -->
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<br>
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<p>
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@@ -1784,7 +1784,7 @@ plt.show()
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<p>
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Let us bring up our good old boostrap example from the linear regression lectures. We change the linerar regression algorithm with
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a decision tree wth different depths and perform a bootstrap aggregate (in this case we as many bootstraps as data points \( n \)).
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a decision tree wth different depths and perform a bootstrap aggregate (in this case we perform as many bootstraps as data points \( n \)).
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<p>
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<!-- code=python (!bc pycod) typeset with pygments style "perldoc" -->
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@@ -1889,7 +1889,7 @@ bagged trees will look quite similar to each other. Hence the
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predictions from the bagged trees will be highly correlated.
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Unfortunately, averaging many highly correlated quantities does not
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lead to as large of a reduction in variance as averaging many
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uncorrelated quanti- ties. In particular, this means that bagging will
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uncorrelated quantities. In particular, this means that bagging will
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not lead to a substantial reduction in variance over a single tree in
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this setting.
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</section>
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@@ -1903,17 +1903,17 @@ The algorithm described here can be applied to both classification and regressio
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We will grow of forest of say \( M \) trees.
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<ol>
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<p><li> For \( m=1:M \) we</li>
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<p><li> For \( b=1:B \)</li>
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<ul>
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<p><li> Draw a bootstrap sample of from the training data organized in our \( \boldsymbol{X} \) matrix.</li>
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<p><li> We grow then a random forest tree \( T_m \) based on the bootstrapped data by repeating the steps outlined till we reach the maximum node size is reached</li>
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<p><li> We grow then a random forest tree \( T_b \) based on the bootstrapped data by repeating the steps outlined till we reach the maximum node size is reached</li>
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<ol>
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<p><li> we select \( m \le p \) varibales at random from the \( p \) predictors/features</li>
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<p><li> we select \( m \le p \) variables at random from the \( p \) predictors/features</li>
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<p><li> pick the best split point among the \( m \) features using either the CART algorithm or the ID3 for classification and create a new node</li>
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@@ -1921,7 +1921,7 @@ We will grow of forest of say \( M \) trees.
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</ol>
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<p>
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</ul>
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<p><li> Output then the ensemble of trees \( \{T_m\}_1^{M} \) and make predictions for either a regression type of problem or a classification type of problem.</li>
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<p><li> Output then the ensemble of trees \( \{T_b\}_1^{B} \) and make predictions for either a regression type of problem or a classification type of problem.</li>
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</ol>
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</section>
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@@ -223,7 +223,7 @@ MathJax.Hub.Config({
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<center>[2] <b>Department of Physics and Astronomy and National Superconducting Cyclotron Laboratory, Michigan State University</b></center>
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<br>
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<p>
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<center><h4>Dec 5, 2019</h4></center> <!-- date -->
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<center><h4>Dec 6, 2019</h4></center> <!-- date -->
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<br>
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<p>
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<!-- !split --><br><br><br><br><br><br><br><br><br><br>
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@@ -1806,7 +1806,7 @@ plt.show()
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<p>
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Let us bring up our good old boostrap example from the linear regression lectures. We change the linerar regression algorithm with
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a decision tree wth different depths and perform a bootstrap aggregate (in this case we as many bootstraps as data points \( n \)).
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a decision tree wth different depths and perform a bootstrap aggregate (in this case we perform as many bootstraps as data points \( n \)).
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<p>
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<!-- code=python (!bc pycod) typeset with pygments style "perldoc" -->
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@@ -1908,7 +1908,7 @@ bagged trees will look quite similar to each other. Hence the
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predictions from the bagged trees will be highly correlated.
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Unfortunately, averaging many highly correlated quantities does not
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lead to as large of a reduction in variance as averaging many
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uncorrelated quanti- ties. In particular, this means that bagging will
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uncorrelated quantities. In particular, this means that bagging will
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not lead to a substantial reduction in variance over a single tree in
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this setting.
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@@ -1922,21 +1922,21 @@ The algorithm described here can be applied to both classification and regressio
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We will grow of forest of say \( M \) trees.
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<ol>
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<li> For \( m=1:M \) we</li>
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<li> For \( b=1:B \)</li>
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<ul>
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<li> Draw a bootstrap sample of from the training data organized in our \( \boldsymbol{X} \) matrix.</li>
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<li> We grow then a random forest tree \( T_m \) based on the bootstrapped data by repeating the steps outlined till we reach the maximum node size is reached</li>
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<li> We grow then a random forest tree \( T_b \) based on the bootstrapped data by repeating the steps outlined till we reach the maximum node size is reached</li>
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<ol>
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<li> we select \( m \le p \) varibales at random from the \( p \) predictors/features</li>
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<li> we select \( m \le p \) variables at random from the \( p \) predictors/features</li>
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<li> pick the best split point among the \( m \) features using either the CART algorithm or the ID3 for classification and create a new node</li>
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<li> split the node into daughter nodes</li>
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</ol>
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</ul>
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<li> Output then the ensemble of trees \( \{T_m\}_1^{M} \) and make predictions for either a regression type of problem or a classification type of problem.</li>
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<li> Output then the ensemble of trees \( \{T_b\}_1^{B} \) and make predictions for either a regression type of problem or a classification type of problem.</li>
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</ol>
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<!-- !split --><br><br><br><br><br><br><br><br><br><br>
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@@ -228,7 +228,7 @@ MathJax.Hub.Config({
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<center>[2] <b>Department of Physics and Astronomy and National Superconducting Cyclotron Laboratory, Michigan State University</b></center>
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<br>
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<p>
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<center><h4>Dec 5, 2019</h4></center> <!-- date -->
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<center><h4>Dec 6, 2019</h4></center> <!-- date -->
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<br>
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<p>
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<!-- !split --><br><br><br><br><br><br><br><br><br><br>
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@@ -1811,7 +1811,7 @@ plt<span style="color: #666666">.</span>show()
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<p>
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Let us bring up our good old boostrap example from the linear regression lectures. We change the linerar regression algorithm with
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a decision tree wth different depths and perform a bootstrap aggregate (in this case we as many bootstraps as data points \( n \)).
|
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a decision tree wth different depths and perform a bootstrap aggregate (in this case we perform as many bootstraps as data points \( n \)).
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<p>
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<!-- code=python (!bc pycod) typeset with pygments style "default" -->
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@@ -1913,7 +1913,7 @@ bagged trees will look quite similar to each other. Hence the
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predictions from the bagged trees will be highly correlated.
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Unfortunately, averaging many highly correlated quantities does not
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lead to as large of a reduction in variance as averaging many
|
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uncorrelated quanti- ties. In particular, this means that bagging will
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uncorrelated quantities. In particular, this means that bagging will
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not lead to a substantial reduction in variance over a single tree in
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this setting.
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@@ -1927,21 +1927,21 @@ The algorithm described here can be applied to both classification and regressio
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We will grow of forest of say \( M \) trees.
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<ol>
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<li> For \( m=1:M \) we</li>
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<li> For \( b=1:B \)</li>
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<ul>
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<li> Draw a bootstrap sample of from the training data organized in our \( \boldsymbol{X} \) matrix.</li>
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<li> We grow then a random forest tree \( T_m \) based on the bootstrapped data by repeating the steps outlined till we reach the maximum node size is reached</li>
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<li> We grow then a random forest tree \( T_b \) based on the bootstrapped data by repeating the steps outlined till we reach the maximum node size is reached</li>
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<ol>
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<li> we select \( m \le p \) varibales at random from the \( p \) predictors/features</li>
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<li> we select \( m \le p \) variables at random from the \( p \) predictors/features</li>
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<li> pick the best split point among the \( m \) features using either the CART algorithm or the ID3 for classification and create a new node</li>
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<li> split the node into daughter nodes</li>
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</ol>
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</ul>
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<li> Output then the ensemble of trees \( \{T_m\}_1^{M} \) and make predictions for either a regression type of problem or a classification type of problem.</li>
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<li> Output then the ensemble of trees \( \{T_b\}_1^{B} \) and make predictions for either a regression type of problem or a classification type of problem.</li>
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</ol>
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<!-- !split --><br><br><br><br><br><br><br><br><br><br>
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@@ -10,7 +10,7 @@
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"<!-- Author: --> \n",
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"**Morten Hjorth-Jensen**, Department of Physics, University of Oslo and Department of Physics and Astronomy and National Superconducting Cyclotron Laboratory, Michigan State University\n",
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"\n",
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"Date: **Dec 5, 2019**\n",
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"Date: **Dec 6, 2019**\n",
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"\n",
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"Copyright 1999-2019, Morten Hjorth-Jensen. Released under CC Attribution-NonCommercial 4.0 license\n",
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"\n",
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@@ -1827,7 +1827,7 @@
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"## Making your own Bootstrap: Changing the Level of the Decision Tree\n",
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"\n",
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"Let us bring up our good old boostrap example from the linear regression lectures. We change the linerar regression algorithm with\n",
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"a decision tree wth different depths and perform a bootstrap aggregate (in this case we as many bootstraps as data points $n$)."
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"a decision tree wth different depths and perform a bootstrap aggregate (in this case we perform as many bootstraps as data points $n$)."
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]
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},
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{
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@@ -1944,7 +1944,7 @@
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"predictions from the bagged trees will be highly correlated.\n",
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"Unfortunately, averaging many highly correlated quantities does not\n",
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"lead to as large of a reduction in variance as averaging many\n",
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"uncorrelated quanti- ties. In particular, this means that bagging will\n",
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"uncorrelated quantities. In particular, this means that bagging will\n",
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"not lead to a substantial reduction in variance over a single tree in\n",
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"this setting.\n",
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"\n",
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@@ -1953,13 +1953,13 @@
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"The algorithm described here can be applied to both classification and regression problems.\n",
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"\n",
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"We will grow of forest of say $M$ trees.\n",
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"1. For $m=1:M$ we\n",
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"1. For $b=1:B$\n",
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"\n",
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" * Draw a bootstrap sample of from the training data organized in our $\\boldsymbol{X}$ matrix.\n",
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"\n",
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" * We grow then a random forest tree $T_m$ based on the bootstrapped data by repeating the steps outlined till we reach the maximum node size is reached\n",
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" * We grow then a random forest tree $T_b$ based on the bootstrapped data by repeating the steps outlined till we reach the maximum node size is reached\n",
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"\n",
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"1. we select $m \\le p$ varibales at random from the $p$ predictors/features\n",
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"1. we select $m \\le p$ variables at random from the $p$ predictors/features\n",
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"\n",
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"2. pick the best split point among the $m$ features using either the CART algorithm or the ID3 for classification and create a new node\n",
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"\n",
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@@ -1967,7 +1967,7 @@
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"\n",
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"\n",
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"\n",
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"4. Output then the ensemble of trees $\\{T_m\\}_1^{M}$ and make predictions for either a regression type of problem or a classification type of problem. \n",
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"4. Output then the ensemble of trees $\\{T_b\\}_1^{B}$ and make predictions for either a regression type of problem or a classification type of problem. \n",
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"\n",
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"## Random Forests Compared with other Methods on the Cancer Data"
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]
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Binary file not shown.
Binary file not shown.
@@ -1449,7 +1449,7 @@ plt.show()
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===== Making your own Bootstrap: Changing the Level of the Decision Tree =====
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|
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Let us bring up our good old boostrap example from the linear regression lectures. We change the linerar regression algorithm with
|
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a decision tree wth different depths and perform a bootstrap aggregate (in this case we as many bootstraps as data points $n$).
|
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a decision tree wth different depths and perform a bootstrap aggregate (in this case we perform as many bootstraps as data points $n$).
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!bc pycod
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import matplotlib.pyplot as plt
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@@ -1550,7 +1550,7 @@ bagged trees will look quite similar to each other. Hence the
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predictions from the bagged trees will be highly correlated.
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Unfortunately, averaging many highly correlated quantities does not
|
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lead to as large of a reduction in variance as averaging many
|
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uncorrelated quanti- ties. In particular, this means that bagging will
|
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uncorrelated quantities. In particular, this means that bagging will
|
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not lead to a substantial reduction in variance over a single tree in
|
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this setting.
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@@ -1560,13 +1560,13 @@ this setting.
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The algorithm described here can be applied to both classification and regression problems.
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We will grow of forest of say $M$ trees.
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o For $m=1:M$ we
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o For $b=1:B$
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* Draw a bootstrap sample of from the training data organized in our $\bm{X}$ matrix.
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* We grow then a random forest tree $T_m$ based on the bootstrapped data by repeating the steps outlined till we reach the maximum node size is reached
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o we select $m \le p$ varibales at random from the $p$ predictors/features
|
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* We grow then a random forest tree $T_b$ based on the bootstrapped data by repeating the steps outlined till we reach the maximum node size is reached
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o we select $m \le p$ variables at random from the $p$ predictors/features
|
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o pick the best split point among the $m$ features using either the CART algorithm or the ID3 for classification and create a new node
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o split the node into daughter nodes
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o Output then the ensemble of trees $\{T_m\}_1^{M}$ and make predictions for either a regression type of problem or a classification type of problem.
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o Output then the ensemble of trees $\{T_b\}_1^{B}$ and make predictions for either a regression type of problem or a classification type of problem.
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