Add per-step Spawning ntuple, Geant4 submodule superbuild, and standalone dataset executables #1
+1
-29
@@ -55,38 +55,10 @@ target_link_libraries(minicalo PUBLIC ${Geant4_LIBRARIES} ${Python3_LIBRARIES})
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#----------------------------------------------------------------------------
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# Add the executable, and link it to the Geant4 and Python libraries
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#
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add_executable(exampleB4a exampleB4a.cc ${sources} ${headers})
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target_link_libraries(exampleB4a ${Geant4_LIBRARIES} ${Python3_LIBRARIES})
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add_executable(run_pbwo4 run_pbwo4.cc ${sources} ${headers})
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target_link_libraries(run_pbwo4 ${Geant4_LIBRARIES} ${Python3_LIBRARIES})
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#----------------------------------------------------------------------------
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# Copy all scripts to the build directory, i.e. the directory in which we
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# build B4a. This is so that we can run the executable directly because it
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# relies on these scripts being in the current working directory.
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#
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set(EXAMPLEB4A_SCRIPTS
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exampleB4a.out
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exampleB4.in
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gui.mac
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init_vis.mac
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plotHisto.C
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plotNtuple.C
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run1.mac
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run2.mac
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vis.mac
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)
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foreach(_script ${EXAMPLEB4A_SCRIPTS})
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configure_file(
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${PROJECT_SOURCE_DIR}/${_script}
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${PROJECT_BINARY_DIR}/${_script}
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COPYONLY
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)
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endforeach()
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#----------------------------------------------------------------------------
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# Install the executable to 'bin' directory under CMAKE_INSTALL_PREFIX
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#
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#install(TARGETS exampleB4a DESTINATION bin)
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#install(TARGETS run_pbwo4 DESTINATION bin)
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-21
@@ -1,21 +0,0 @@
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# --------------------------------------------------------------
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# GNUmakefile for examples module. Gabriele Cosmo, 06/04/98.
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# --------------------------------------------------------------
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name := exampleB4a
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G4TARGET := $(name)
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G4EXLIB := true
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ifndef G4INSTALL
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G4INSTALL = ../../..
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endif
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.PHONY: all
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all: lib bin
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include $(G4INSTALL)/config/binmake.gmk
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visclean:
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rm -f g4*.prim g4*.eps g4*.wrl
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rm -f .DAWN_*
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@@ -1,139 +0,0 @@
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FROM nvidia/cuda:11.8.0-cudnn8-devel-ubuntu22.04
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SHELL ["/bin/sh", "-c"]
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USER root
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ENV DEBIAN_FRONTEND=noninteractive
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RUN /usr/bin/ls
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RUN sed -i "s,# deb http://archive.canonical.com/ubuntu,deb http://archive.canonical.com/ubuntu,g" /etc/apt/sources.list
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## Install some deps
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#RUN ls /etc/apt/
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RUN apt-get update -y
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RUN apt-get install -y software-properties-common
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RUN add-apt-repository ppa:deadsnakes/ppa
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RUN apt-get update -y && apt-get upgrade -y
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RUN apt-get install -y python3 python3-dev python3-venv python3-pip
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#RUN update-alternatives --install /usr/bin/python3 python3 /usr/bin/python3.10 100
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RUN apt-get install -y dpkg-dev cmake g++ gcc binutils libx11-dev libxpm-dev libxft-dev libxext-dev libssl-dev
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#RUN python3 --version && python3 -m ensurepip
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RUN python3 -m pip install --upgrade pip
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RUN python3 -m pip install pandas numpy matplotlib MarkupSafe wandb uproot setuptools awkward-pandas plotly
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RUN python3 -m pip install --no-cache-dir torch torchvision torchaudio --index-url https://download.pytorch.org/whl/cu118
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RUN python3 -m pip install torch_geometric
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RUN python3 -m pip install torch-cluster -f https://data.pyg.org/whl/torch-2.1.0+cu118.html
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# # # # GEANT
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RUN apt-get -y install libxmu-dev \
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libgl1-mesa-dev \
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libxerces-c-dev \
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libexpat1 \
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libx11-dev \
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libglu1-mesa-dev \
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freeglut3-dev \
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mesa-common-dev \
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imagemagick \
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gv wget autotools-dev libicu-dev libbz2-dev
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## DAWN FOR VIS
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RUN mkdir dawn-source \
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&& wget -q -O - http://geant4.kek.jp/~tanaka/src/dawn_3_91a.tgz | tar xzf - -C "dawn-source" \
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&& export DAWN_PS_PREVIEWER=NONE && cd dawn-source/dawn_3_91a \
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&& make clean && make guiclean && make && make install \
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&& cd - && rm -rf "dawn-source"
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## main package — build Geant4 from submodule source
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ADD minicalosim/lib/geant4 /tmp/geant4-src
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RUN rm -f /tmp/geant4-src/.git && \
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cmake \
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-S /tmp/geant4-src \
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-B /tmp/geant4-build \
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-DCMAKE_INSTALL_PREFIX=/opt/geant4-v11.1.2 \
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-DCMAKE_RULE_MESSAGES=OFF \
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-DGEANT4_INSTALL_DATA=ON \
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-DGEANT4_USE_GDML=ON \
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-DGEANT4_USE_OPENGL_X11=ON \
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-DGEANT4_BUILD_MULTITHREADED=OFF \
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-DGEANT4_BUILD_TLS_MODEL=global-dynamic \
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-DGEANT4_USE_RAYTRACER_X11=ON \
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>/dev/null && \
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cmake --build /tmp/geant4-build --parallel $(( $(nproc) < 16 ? $(nproc) : 16 )) >/dev/null && \
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cmake --install /tmp/geant4-build >/dev/null && \
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rm -rf /tmp/geant4-src /tmp/geant4-build
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RUN python3 -m pip install geant4-pybind
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ENV LD_LIBRARY_PATH="/opt/geant4-v11.1.2/lib:${LD_LIBRARY_PATH}"
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RUN apt-get install -y git
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RUN python3 -m pip install ipython
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RUN apt-get install -y tk # for dawn
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# add jupyter packages for UC2 on top so they don't need to be installed every time
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RUN python3 -m pip install jupyterlab jupyterhub==4.1.5 batchspawner
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RUN ln -s /usr/bin/python3 /usr/bin/python
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RUN python3 -m pip install torch-scatter -f https://data.pyg.org/whl/torch-2.1.0+cu118.html
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#finally the package; use the commit hash to check out the correct version and only get them here, such that the rest can be cached
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ARG BUILD_DATE
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LABEL org.label-schema.build-date=$BUILD_DATE
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ARG COMMIT
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ARG USER
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# copy minicalosim and checkout the correct commit
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ADD minicalosim /root/minicalosim
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RUN cd /root/minicalosim && git checkout $COMMIT && \
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git submodule update --init lib/pybind11 && \
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mkdir -p build && cd build && rm -rf * && cmake ../ && make -j$(( $(nproc) < 16 ? $(nproc) : 16 ))
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RUN echo "commit = '${COMMIT}'" > /root/minicalosim/bind/minicalo_version.py
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RUN cp /root/minicalosim/build/minicalo* /root/minicalosim/bind/G4Calo.py /root/minicalosim/bind/minicalo_tools.py /root/minicalosim/bind/minipandas.py /root/minicalosim/bind/minicalo_version.py /usr/local/lib/python3.10/dist-packages/
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RUN cp /root/minicalosim/bind/G4Calo_exec.py /usr/local/bin/
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RUN cp -r /root/minicalosim/bind /examples
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RUN cp /root/minicalosim/docker/start-notebook.py /usr/local/bin/
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RUN cp /root/minicalosim/docker/start-notebook.sh /usr/local/bin/
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RUN cp /root/minicalosim/docker/start-singleuser.py /usr/local/bin/
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RUN cp /root/minicalosim/docker/start-singleuser.sh /usr/local/bin/
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RUN cp /root/minicalosim/docker/fix-permissions /usr/local/bin/
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RUN cp /root/minicalosim/docker/check_cuda_torch.py /usr/local/bin/
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ARG NB_USER="jovyan"
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ARG NB_UID="1000"
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ARG NB_GID="100"
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USER root
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#RUN groupadd -g ${NB_GID} ${NB_USER} && \
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RUN useradd -m -s /bin/bash -N -u ${NB_UID} -g ${NB_GID} ${NB_USER}
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RUN mkdir /etc/jupyter
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RUN fix-permissions /etc/jupyter/
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# clean up
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RUN rm -rf /root/minicalosim
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RUN pip3 install pyarrow fastparquet
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USER ${NB_UID}
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CMD ["bash"]
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@@ -1,132 +0,0 @@
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FROM ubuntu:20.04
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SHELL ["/bin/sh", "-c"]
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USER root
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ENV DEBIAN_FRONTEND=noninteractive
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RUN /usr/bin/ls
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RUN sed -i "s,# deb http://archive.canonical.com/ubuntu,deb http://archive.canonical.com/ubuntu,g" /etc/apt/sources.list
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## Install some deps
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#RUN ls /etc/apt/
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RUN apt-get update -y
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RUN apt-get install -y software-properties-common
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RUN add-apt-repository ppa:deadsnakes/ppa
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RUN apt-get update -y && apt-get upgrade -y
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RUN apt-get install -y python3 python3-dev python3-venv python3-pip
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#RUN update-alternatives --install /usr/bin/python3 python3 /usr/bin/python3.10 100
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|
||||
RUN apt-get install -y dpkg-dev cmake g++ gcc binutils libx11-dev libxpm-dev libxft-dev libxext-dev libssl-dev
|
||||
|
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#RUN python3 --version && python3 -m ensurepip
|
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RUN python3 -m pip install --upgrade pip
|
||||
|
||||
RUN python3 -m pip install pandas numpy matplotlib MarkupSafe wandb uproot setuptools awkward-pandas plotly
|
||||
RUN python3 -m pip install --no-cache-dir torch torchvision torchaudio --index-url https://download.pytorch.org/whl/cu118
|
||||
RUN python3 -m pip install torch_geometric
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RUN python3 -m pip install torch-cluster -f https://data.pyg.org/whl/torch-2.1.0+cu118.html
|
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|
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# # # # GEANT
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RUN apt-get -y install libxmu-dev \
|
||||
libgl1-mesa-dev \
|
||||
libxerces-c-dev \
|
||||
libexpat1 \
|
||||
libx11-dev \
|
||||
libglu1-mesa-dev \
|
||||
freeglut3-dev \
|
||||
mesa-common-dev \
|
||||
imagemagick \
|
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gv wget autotools-dev libicu-dev libbz2-dev
|
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## DAWN FOR VIS
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||||
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RUN mkdir dawn-source \
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&& wget -q -O - http://geant4.kek.jp/~tanaka/src/dawn_3_91a.tgz | tar xzf - -C "dawn-source" \
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&& export DAWN_PS_PREVIEWER=NONE && cd dawn-source/dawn_3_91a \
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&& make clean && make guiclean && make && make install \
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&& cd - && rm -rf "dawn-source"
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## main package — build Geant4 from submodule source
|
||||
ADD minicalosim/lib/geant4 /tmp/geant4-src
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RUN rm -f /tmp/geant4-src/.git && \
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cmake \
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-S /tmp/geant4-src \
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-B /tmp/geant4-build \
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-DCMAKE_INSTALL_PREFIX=/opt/geant4-v11.1.2 \
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-DCMAKE_RULE_MESSAGES=OFF \
|
||||
-DGEANT4_INSTALL_DATA=ON \
|
||||
-DGEANT4_USE_GDML=ON \
|
||||
-DGEANT4_USE_OPENGL_X11=ON \
|
||||
-DGEANT4_BUILD_MULTITHREADED=ON \
|
||||
-DGEANT4_BUILD_TLS_MODEL=global-dynamic \
|
||||
-DGEANT4_USE_RAYTRACER_X11=ON \
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>/dev/null && \
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cmake --build /tmp/geant4-build --parallel $(( $(nproc) < 16 ? $(nproc) : 16 )) >/dev/null && \
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cmake --install /tmp/geant4-build >/dev/null && \
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rm -rf /tmp/geant4-src /tmp/geant4-build
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RUN python3 -m pip install geant4-pybind
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ENV LD_LIBRARY_PATH="/opt/geant4-v11.1.2/lib:${LD_LIBRARY_PATH}"
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|
||||
RUN apt-get install -y git
|
||||
|
||||
RUN python3 -m pip install ipython
|
||||
RUN apt-get install -y tk # for dawn
|
||||
|
||||
# add jupyter packages for UC2 on top so they don't need to be installed every time
|
||||
RUN python3 -m pip install jupyterlab jupyterhub==4.1.5 batchspawner
|
||||
RUN ln -s /usr/bin/python3 /usr/bin/python
|
||||
|
||||
|
||||
RUN python3 -m pip install torch-scatter -f https://data.pyg.org/whl/torch-2.1.0+cu118.html
|
||||
|
||||
#finally the package; use the commit hash to check out the correct version and only get them here, such that the rest can be cached
|
||||
ARG BUILD_DATE
|
||||
LABEL org.label-schema.build-date=$BUILD_DATE
|
||||
ARG COMMIT
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ARG USER
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||||
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||||
# copy minicalosim and checkout the correct commit
|
||||
ADD minicalosim /root/minicalosim
|
||||
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||||
RUN cd /root/minicalosim && git checkout $COMMIT && \
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git submodule update --init lib/pybind11 && \
|
||||
mkdir -p build && cd build && rm -rf * && cmake ../ && make -j$(( $(nproc) < 16 ? $(nproc) : 16 )) &&\
|
||||
echo "commit = '${COMMIT}'" > ../bind/minicalo_version.py && \
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cp minicalo* ../bind/G4Calo.py ../bind/minicalo_version.py /usr/local/lib/python3.8/dist-packages/
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||||
|
||||
|
||||
|
||||
RUN cp /root/minicalosim/docker/start-notebook.py /usr/local/bin/
|
||||
RUN cp /root/minicalosim/docker/start-notebook.sh /usr/local/bin/
|
||||
RUN cp /root/minicalosim/docker/start-singleuser.py /usr/local/bin/
|
||||
RUN cp /root/minicalosim/docker/start-singleuser.sh /usr/local/bin/
|
||||
RUN cp /root/minicalosim/docker/fix-permissions /usr/local/bin/
|
||||
RUN cp /root/minicalosim/docker/check_cuda_torch.py /usr/local/bin/
|
||||
|
||||
ARG NB_USER="jovyan"
|
||||
ARG NB_UID="1000"
|
||||
ARG NB_GID="100"
|
||||
|
||||
USER root
|
||||
|
||||
#RUN groupadd -g ${NB_GID} ${NB_USER} && \
|
||||
RUN useradd -m -s /bin/bash -N -u ${NB_UID} -g ${NB_GID} ${NB_USER}
|
||||
|
||||
RUN mkdir /etc/jupyter
|
||||
RUN fix-permissions /etc/jupyter/
|
||||
|
||||
|
||||
# clean up
|
||||
RUN rm -rf /root/minicalosim
|
||||
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||||
USER ${NB_UID}
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||||
CMD ["start-notebook.sh"]
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||||
|
||||
@@ -1,95 +0,0 @@
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||||
#!/usr/bin/bash
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||||
|
||||
# a simple parser for the args <commit> and --no-cache
|
||||
# if no commit is given, the latest commit is used
|
||||
# if --no-cache is given, the --no-cache flag is passed to the docker build command
|
||||
# if only --no-cache is given, the latest commit is used
|
||||
|
||||
# check if commit is given as argument, if not use the latest commit
|
||||
# check if an argument is given at all
|
||||
|
||||
|
||||
if [ -n "$1" ]; then
|
||||
#check if the first arg is --no-cache
|
||||
if [ "$1" == "--no-cache" ]; then
|
||||
FORCE_NO_CACHE="--no-cache"
|
||||
COMMIT=$(git rev-parse --short HEAD)
|
||||
else
|
||||
COMMIT=$1
|
||||
#check if this is a valid commit
|
||||
if ! git cat-file -e $COMMIT^{commit} 2>/dev/null; then
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||||
echo "ERROR: Commit $COMMIT not found in local repository."
|
||||
exit 1
|
||||
fi
|
||||
fi
|
||||
else #default to last commit
|
||||
COMMIT=$(git rev-parse --short HEAD)
|
||||
fi
|
||||
|
||||
|
||||
# COMMIT is a valid commit at this point. If COMMIT is the last commit and changes are not commited, the user is warned.
|
||||
|
||||
#check if the commit is the last commit
|
||||
if [ "$COMMIT" == "$(git rev-parse --short HEAD)" ]; then
|
||||
# check if we have uncommitted changes and if so warn the user.
|
||||
if [ -n "$(git status --porcelain)" ]; then
|
||||
echo "WARNING: You are building the latest commit ${COMMIT}, but you have uncommitted changes."
|
||||
echo " This means that the image will not be reproducible."
|
||||
echo " If you want to build the latest commit, please commit your changes first."
|
||||
read -p "Do you want to continue anyway? [y/N] " -n 1 -r
|
||||
echo
|
||||
if [[ ! $REPLY =~ ^[Yy]$ ]]; then
|
||||
exit 1
|
||||
fi
|
||||
fi
|
||||
fi
|
||||
|
||||
check_remote_commit_exists() {
|
||||
# Usage: check_remote_commit_exists <repo-url> <commit-sha>
|
||||
local url="$1"
|
||||
local commit="$2"
|
||||
|
||||
# Create a temporary directory for a shallow fetch
|
||||
local tmpdir
|
||||
tmpdir="$(mktemp -d)"
|
||||
trap 'rm -rf "$tmpdir"' RETURN # auto-cleanup on function exit
|
||||
|
||||
git -C "$tmpdir" init -q
|
||||
git -C "$tmpdir" remote add origin "$url"
|
||||
|
||||
if git -C "$tmpdir" fetch --quiet --depth=1 origin "$commit" 2>/dev/null; then
|
||||
echo "✅ Commit $commit exists on remote."
|
||||
return 0
|
||||
else
|
||||
echo "❌ ERROR: Commit $commit not found on remote."
|
||||
echo "Refs currently visible on remote:"
|
||||
git ls-remote --heads --tags "$url"
|
||||
return 1
|
||||
fi
|
||||
}
|
||||
|
||||
# check if the commit has been pushed
|
||||
if ! check_remote_commit_exists https://github.com/jkiesele/minicalosim $COMMIT; then
|
||||
echo "ERROR: Commit $COMMIT not found in remote repository."
|
||||
fi
|
||||
|
||||
# check if no-cache is given as second argument
|
||||
if [ "$2" == "--no-cache" ]; then
|
||||
FORCE_NO_CACHE="--no-cache"
|
||||
fi
|
||||
|
||||
#switch to directory this script is located in
|
||||
cd "$(dirname "$0")"
|
||||
cd ../../ #switch to the root directory of the project
|
||||
echo "Building minicalosim:$COMMIT"
|
||||
|
||||
#print the current working directory
|
||||
echo "Current working directory: $(pwd)"
|
||||
|
||||
docker build $FORCE_NO_CACHE -t jkiesele/minicalosim:$COMMIT --build-arg USER=$USER --build-arg BUILD_DATE="$(date)" --build-arg COMMIT=$COMMIT -f minicalosim/docker/Dockerfile .
|
||||
|
||||
echo "sucessfully built container jkiesele/minicalosim:${COMMIT}"
|
||||
|
||||
docker tag jkiesele/minicalosim:$COMMIT jkiesele/minicalosim:latest
|
||||
|
||||
echo "also tagged as jkiesele/minicalosim:latest"
|
||||
@@ -1,73 +0,0 @@
|
||||
#!/usr/bin/bash
|
||||
|
||||
# a simple parser for the args <commit> and --no-cache
|
||||
# if no commit is given, the latest commit is used
|
||||
# if --no-cache is given, the --no-cache flag is passed to the docker build command
|
||||
# if only --no-cache is given, the latest commit is used
|
||||
|
||||
# check if commit is given as argument, if not use the latest commit
|
||||
# check if an argument is given at all
|
||||
|
||||
|
||||
if [ -n "$1" ]; then
|
||||
#check if the first arg is --no-cache
|
||||
if [ "$1" == "--no-cache" ]; then
|
||||
FORCE_NO_CACHE="--no-cache"
|
||||
COMMIT=$(git rev-parse --short HEAD)
|
||||
else
|
||||
COMMIT=$1
|
||||
#check if this is a valid commit
|
||||
if ! git cat-file -e $COMMIT^{commit} 2>/dev/null; then
|
||||
echo "ERROR: Commit $COMMIT not found in local repository."
|
||||
exit 1
|
||||
fi
|
||||
fi
|
||||
else #default to last commit
|
||||
COMMIT=$(git rev-parse --short HEAD)
|
||||
fi
|
||||
|
||||
|
||||
# COMMIT is a valid commit at this point. If COMMIT is the last commit and changes are not commited, the user is warned.
|
||||
|
||||
#check if the commit is the last commit
|
||||
if [ "$COMMIT" == "$(git rev-parse --short HEAD)" ]; then
|
||||
# check if we have uncommitted changes and if so warn the user.
|
||||
if [ -n "$(git status --porcelain)" ]; then
|
||||
echo "WARNING: You are building the latest commit ${COMMIT}, but you have uncommitted changes."
|
||||
echo " This means that the image will not be reproducible."
|
||||
echo " If you want to build the latest commit, please commit your changes first."
|
||||
read -p "Do you want to continue anyway? [y/N] " -n 1 -r
|
||||
echo
|
||||
if [[ ! $REPLY =~ ^[Yy]$ ]]; then
|
||||
exit 1
|
||||
fi
|
||||
fi
|
||||
fi
|
||||
|
||||
# check if the commit has been pushed
|
||||
REMOTE_COMMIT=$(git ls-remote https://gitlab.etp.kit.edu/jkiesele/minicalosim.git | grep $COMMIT)
|
||||
if [ -z "$REMOTE_COMMIT" ]; then
|
||||
echo "ERROR: Commit $COMMIT not found in remote repository."
|
||||
exit 1
|
||||
fi
|
||||
|
||||
# check if no-cache is given as second argument
|
||||
if [ "$2" == "--no-cache" ]; then
|
||||
FORCE_NO_CACHE="--no-cache"
|
||||
fi
|
||||
|
||||
#switch to directory this script is located in
|
||||
cd "$(dirname "$0")"
|
||||
cd ../../ #switch to the root directory of the project
|
||||
echo "Building minicalosim_cpu:$COMMIT"
|
||||
|
||||
#print the current working directory
|
||||
echo "Current working directory: $(pwd)"
|
||||
|
||||
docker build $FORCE_NO_CACHE -t jkiesele/minicalosim_cpu:$COMMIT --build-arg USER=$USER --build-arg BUILD_DATE="$(date)" --build-arg COMMIT=$COMMIT -f minicalosim/docker/Dockerfile-cpu .
|
||||
|
||||
echo "sucessfully built container jkiesele/minicalosim_cpu:${COMMIT}"
|
||||
|
||||
docker tag jkiesele/minicalosim_cpu:$COMMIT jkiesele/minicalosim_cpu:latest
|
||||
|
||||
echo "also tagged as jkiesele/minicalosim_cpu:latest"
|
||||
@@ -1,74 +0,0 @@
|
||||
#!/usr/bin/bash
|
||||
|
||||
if [ -n "$1" ]; then
|
||||
if [ "$1" == "--no-cache" ]; then
|
||||
FORCE_NO_CACHE="--no-cache"
|
||||
COMMIT=$(git rev-parse --short HEAD)
|
||||
else
|
||||
COMMIT=$1
|
||||
if ! git cat-file -e $COMMIT^{commit} 2>/dev/null; then
|
||||
echo "ERROR: Commit $COMMIT not found in local repository."
|
||||
exit 1
|
||||
fi
|
||||
fi
|
||||
else
|
||||
COMMIT=$(git rev-parse --short HEAD)
|
||||
fi
|
||||
|
||||
if [ "$COMMIT" == "$(git rev-parse --short HEAD)" ]; then
|
||||
if [ -n "$(git status --porcelain)" ]; then
|
||||
echo "WARNING: You are building the latest commit ${COMMIT}, but you have uncommitted changes."
|
||||
echo " This means that the image will not be reproducible."
|
||||
echo " If you want to build the latest commit, please commit your changes first."
|
||||
read -p "Do you want to continue anyway? [y/N] " -n 1 -r
|
||||
echo
|
||||
if [[ ! $REPLY =~ ^[Yy]$ ]]; then
|
||||
exit 1
|
||||
fi
|
||||
fi
|
||||
fi
|
||||
|
||||
check_remote_commit_exists() {
|
||||
local url="$1"
|
||||
local commit="$2"
|
||||
local tmpdir
|
||||
tmpdir="$(mktemp -d)"
|
||||
trap 'rm -rf "$tmpdir"' RETURN
|
||||
git -C "$tmpdir" init -q
|
||||
git -C "$tmpdir" remote add origin "$url"
|
||||
if git -C "$tmpdir" fetch --quiet --depth=1 origin "$commit" 2>/dev/null; then
|
||||
echo "✅ Commit $commit exists on remote."
|
||||
return 0
|
||||
else
|
||||
echo "❌ ERROR: Commit $commit not found on remote."
|
||||
echo "Refs currently visible on remote:"
|
||||
git ls-remote --heads --tags "$url"
|
||||
return 1
|
||||
fi
|
||||
}
|
||||
|
||||
if ! check_remote_commit_exists https://github.com/jkiesele/minicalosim $COMMIT; then
|
||||
echo "WARNING: Commit $COMMIT not found in remote repository."
|
||||
fi
|
||||
|
||||
if [ "$2" == "--no-cache" ]; then
|
||||
FORCE_NO_CACHE="--no-cache"
|
||||
fi
|
||||
|
||||
cd "$(dirname "$0")"
|
||||
cd ../../
|
||||
echo "Building minicalosim-mini:$COMMIT"
|
||||
echo "Current working directory: $(pwd)"
|
||||
|
||||
docker build $FORCE_NO_CACHE \
|
||||
-t jkiesele/minicalosim-mini:$COMMIT \
|
||||
--build-arg USER=$USER \
|
||||
--build-arg BUILD_DATE="$(date)" \
|
||||
--build-arg COMMIT=$COMMIT \
|
||||
-f minicalosim/docker/Dockerfile-mini .
|
||||
|
||||
echo "successfully built container jkiesele/minicalosim-mini:${COMMIT}"
|
||||
|
||||
docker tag jkiesele/minicalosim-mini:$COMMIT jkiesele/minicalosim-mini:latest
|
||||
|
||||
echo "also tagged as jkiesele/minicalosim-mini:latest"
|
||||
@@ -1,26 +0,0 @@
|
||||
#!/usr/bin/env python
|
||||
'''
|
||||
little script to check if cuda is available in pytorch and working
|
||||
organised as a check that raises an exception if cuda is not available, and data cannot be moved to the gpu
|
||||
'''
|
||||
import torch
|
||||
import numpy as np
|
||||
import os
|
||||
|
||||
def check_cuda():
|
||||
if not torch.cuda.is_available():
|
||||
raise Exception("CUDA is not available. Please check if you have installed the correct version of CUDA and the correct version of the NVIDIA driver.")
|
||||
|
||||
try:
|
||||
a = torch.tensor([1,2,3])
|
||||
a = a.cuda()
|
||||
a = a*a
|
||||
except:
|
||||
raise Exception("Cannot move data to the GPU. Please check if you have installed the correct version of CUDA and the correct version of the NVIDIA driver.")
|
||||
|
||||
print("CUDA is available and working correctly.")
|
||||
|
||||
if __name__ == '__main__':
|
||||
check_cuda()
|
||||
print("All checks passed.")
|
||||
os._exit(0)
|
||||
@@ -1,33 +0,0 @@
|
||||
#!/bin/bash
|
||||
# Set permissions on a directory
|
||||
# After any installation, if a directory needs to be (human) user-writable, run this script on it.
|
||||
# It will make everything in the directory owned by the group ${NB_GID} and writable by that group.
|
||||
# Deployments that want to set a specific user id can preserve permissions
|
||||
# by adding the `--group-add users` line to `docker run`.
|
||||
|
||||
# Uses find to avoid touching files that already have the right permissions,
|
||||
# which would cause a massive image explosion
|
||||
|
||||
# Right permissions are:
|
||||
# group=${NB_GID}
|
||||
# AND permissions include group rwX (directory-execute)
|
||||
# AND directories have setuid,setgid bits set
|
||||
|
||||
set -e
|
||||
|
||||
for d in "$@"; do
|
||||
find "${d}" \
|
||||
! \( \
|
||||
-group "${NB_GID}" \
|
||||
-a -perm -g+rwX \
|
||||
\) \
|
||||
-exec chgrp "${NB_GID}" -- {} \+ \
|
||||
-exec chmod g+rwX -- {} \+
|
||||
# setuid, setgid *on directories only*
|
||||
find "${d}" \
|
||||
\( \
|
||||
-type d \
|
||||
-a ! -perm -6000 \
|
||||
\) \
|
||||
-exec chmod +6000 -- {} \+
|
||||
done
|
||||
@@ -1,44 +0,0 @@
|
||||
#!/usr/bin/env python
|
||||
# Copyright (c) Jupyter Development Team.
|
||||
# Distributed under the terms of the Modified BSD License.
|
||||
import os
|
||||
import shlex
|
||||
import sys
|
||||
|
||||
# If we are in a JupyterHub, we pass on to `start-singleuser.py` instead so it does the right thing
|
||||
if "JUPYTERHUB_API_TOKEN" in os.environ:
|
||||
print(
|
||||
"WARNING: using start-singleuser.py instead of start-notebook.py to start a server associated with JupyterHub."
|
||||
)
|
||||
command = ["/usr/local/bin/start-singleuser.py"] + sys.argv[1:]
|
||||
os.execvp(command[0], command)
|
||||
|
||||
|
||||
# Entrypoint is start.sh
|
||||
command = []
|
||||
|
||||
# If we want to survive restarts, launch the command using `run-one-constantly`
|
||||
if os.environ.get("RESTARTABLE") == "yes":
|
||||
command.append("run-one-constantly")
|
||||
|
||||
# We always launch a jupyter subcommand from this script
|
||||
command.append("jupyter")
|
||||
|
||||
# Launch the configured subcommand.
|
||||
# Note that this should be a single string, so we don't split it.
|
||||
# We default to `lab`.
|
||||
jupyter_command = os.environ.get("DOCKER_STACKS_JUPYTER_CMD", "lab")
|
||||
command.append(jupyter_command)
|
||||
|
||||
# Append any optional NOTEBOOK_ARGS we were passed in.
|
||||
# This is supposed to be multiple args passed on to the notebook command,
|
||||
# so we split it correctly with shlex
|
||||
if "NOTEBOOK_ARGS" in os.environ:
|
||||
command += shlex.split(os.environ["NOTEBOOK_ARGS"])
|
||||
|
||||
# Pass through any other args we were passed on the command line
|
||||
command += sys.argv[1:]
|
||||
|
||||
# Execute the command!
|
||||
print("Executing: " + " ".join(command))
|
||||
os.execvp(command[0], command)
|
||||
@@ -1,35 +0,0 @@
|
||||
#!/bin/bash
|
||||
# Shim to emit warning and call start-notebook.py
|
||||
echo "WARNING: Use start-notebook.py instead"
|
||||
|
||||
if id jovyan &> /dev/null; then
|
||||
if ! usermod --home "/home/${NB_USER}" --login "${NB_USER}" jovyan 2>&1 | grep "no changes" > /dev/null; then
|
||||
echo "Updated the jovyan user:"
|
||||
echo "- username: jovyan -> ${NB_USER}"
|
||||
echo "- home dir: /home/jovyan -> /home/${NB_USER}"
|
||||
fi
|
||||
elif ! id -u "${NB_USER}" &> /dev/null; then
|
||||
echo "ERROR: Neither the jovyan user nor '${NB_USER}' exists. This could be the result of stopping and starting, the container with a different NB_USER environment variable."
|
||||
exit 1
|
||||
fi
|
||||
# Ensure the desired user (NB_USER) gets its desired user id (NB_UID) and is
|
||||
# a member of the desired group (NB_GROUP, NB_GID)
|
||||
if [ "${NB_UID}" != "$(id -u "${NB_USER}")" ] || [ "${NB_GID}" != "$(id -g "${NB_USER}")" ]; then
|
||||
echo "Update ${NB_USER}'s UID:GID to ${NB_UID}:${NB_GID}"
|
||||
# Ensure the desired group's existence
|
||||
if [ "${NB_GID}" != "$(id -g "${NB_USER}")" ]; then
|
||||
groupadd --force --gid "${NB_GID}" --non-unique "${NB_GROUP:-${NB_USER}}"
|
||||
fi
|
||||
# Recreate the desired user as we want it
|
||||
userdel "${NB_USER}"
|
||||
useradd --no-log-init --home "/home/${NB_USER}" --shell /bin/bash --uid "${NB_UID}" --gid "${NB_GID}" --groups 100 "${NB_USER}"
|
||||
fi
|
||||
|
||||
|
||||
# if root change user to jovyan
|
||||
if [ "$EUID" -eq 0 ]; then
|
||||
echo "WARNING: Running as root. Use start-notebook.py to run as ${NB_USER} user"
|
||||
exec su ${NB_USER} -c "exec /usr/local/bin/start-notebook.py $@"
|
||||
else
|
||||
exec /usr/local/bin/start-notebook.py "$@"
|
||||
fi
|
||||
@@ -1,26 +0,0 @@
|
||||
#!/usr/bin/env python
|
||||
# Copyright (c) Jupyter Development Team.
|
||||
# Distributed under the terms of the Modified BSD License.
|
||||
import os
|
||||
import shlex
|
||||
import sys
|
||||
|
||||
# Entrypoint is start.sh
|
||||
command = ["jupyterhub-singleuser"]
|
||||
|
||||
# set default ip to 0.0.0.0
|
||||
if "--ip=" not in os.environ.get("NOTEBOOK_ARGS", ""):
|
||||
command.append("--ip=0.0.0.0")
|
||||
|
||||
# Append any optional NOTEBOOK_ARGS we were passed in.
|
||||
# This is supposed to be multiple args passed on to the notebook command,
|
||||
# so we split it correctly with shlex
|
||||
if "NOTEBOOK_ARGS" in os.environ:
|
||||
command += shlex.split(os.environ["NOTEBOOK_ARGS"])
|
||||
|
||||
# Pass any other args we have been passed through
|
||||
command += sys.argv[1:]
|
||||
|
||||
# Execute the command!
|
||||
print("Executing: " + " ".join(command))
|
||||
os.execvp(command[0], command)
|
||||
@@ -1,5 +0,0 @@
|
||||
#!/bin/bash
|
||||
# Shim to emit warning and call start-singleuser.py
|
||||
echo "WARNING: Use start-singleuser.py instead"
|
||||
|
||||
exec /usr/local/bin/start-singleuser.py "$@"
|
||||
@@ -1,23 +0,0 @@
|
||||
# Macro file for example B4 test
|
||||
|
||||
/run/initialize
|
||||
|
||||
# e+ 300MeV
|
||||
/gun/particle e+
|
||||
/gun/energy 300 MeV
|
||||
/run/beamOn 1
|
||||
#
|
||||
# list the existing physics processes
|
||||
/process/list
|
||||
#
|
||||
# switch off MultipleScattering
|
||||
/process/inactivate msc
|
||||
/run/beamOn 1
|
||||
#
|
||||
# switch on MultipleScattering
|
||||
/process/activate msc
|
||||
#
|
||||
# change detector parameter
|
||||
/gun/particle gamma
|
||||
/gun/energy 500 MeV
|
||||
/run/beamOn 1
|
||||
-285
@@ -1,285 +0,0 @@
|
||||
//
|
||||
// ********************************************************************
|
||||
// * License and Disclaimer *
|
||||
// * *
|
||||
// * The Geant4 software is copyright of the Copyright Holders of *
|
||||
// * the Geant4 Collaboration. It is provided under the terms and *
|
||||
// * conditions of the Geant4 Software License, included in the file *
|
||||
// * LICENSE and available at http://cern.ch/geant4/license . These *
|
||||
// * include a list of copyright holders. *
|
||||
// * *
|
||||
// * Neither the authors of this software system, nor their employing *
|
||||
// * institutes,nor the agencies providing financial support for this *
|
||||
// * work make any representation or warranty, express or implied, *
|
||||
// * regarding this software system or assume any liability for its *
|
||||
// * use. Please see the license in the file LICENSE and URL above *
|
||||
// * for the full disclaimer and the limitation of liability. *
|
||||
// * *
|
||||
// * This code implementation is the result of the scientific and *
|
||||
// * technical work of the GEANT4 collaboration. *
|
||||
// * By using, copying, modifying or distributing the software (or *
|
||||
// * any work based on the software) you agree to acknowledge its *
|
||||
// * use in resulting scientific publications, and indicate your *
|
||||
// * acceptance of all terms of the Geant4 Software license. *
|
||||
// ********************************************************************
|
||||
//
|
||||
//
|
||||
/// \file exampleB4a.cc
|
||||
/// \brief Main program of the B4a example
|
||||
|
||||
#include "DetectorConstruction.hh"
|
||||
#include "ActionInitialization.hh"
|
||||
|
||||
#include "G4RunManagerFactory.hh"
|
||||
#include "G4SteppingVerbose.hh"
|
||||
#include "G4UIcommand.hh"
|
||||
#include "G4UImanager.hh"
|
||||
#include "G4UIExecutive.hh"
|
||||
#include "G4VisExecutive.hh"
|
||||
#include "FTFP_BERT.hh"
|
||||
#include "Randomize.hh"
|
||||
|
||||
#include "GeometryDescriptor.hh"
|
||||
|
||||
#include "G4System.hh"
|
||||
|
||||
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
namespace {
|
||||
void PrintUsage() {
|
||||
G4cerr << " Usage: " << G4endl;
|
||||
G4cerr << " exampleB4a [-m macro ] [-u UIsession] [-t nThreads] [-vDefault]"
|
||||
<< G4endl;
|
||||
G4cerr << " note: -t option is available only for multi-threaded mode."
|
||||
<< G4endl;
|
||||
}
|
||||
}
|
||||
|
||||
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
|
||||
|
||||
int main2(int argc,char** argv)
|
||||
{
|
||||
// Evaluate arguments
|
||||
//
|
||||
if ( argc > 7 ) {
|
||||
PrintUsage();
|
||||
return 1;
|
||||
}
|
||||
|
||||
G4String macro;
|
||||
G4String session;
|
||||
G4bool verboseBestUnits = true;
|
||||
#ifdef G4MULTITHREADED
|
||||
G4int nThreads = 0;
|
||||
#endif
|
||||
for ( G4int i=1; i<argc; i=i+2 ) {
|
||||
if ( G4String(argv[i]) == "-m" ) macro = argv[i+1];
|
||||
else if ( G4String(argv[i]) == "-u" ) session = argv[i+1];
|
||||
#ifdef G4MULTITHREADED
|
||||
else if ( G4String(argv[i]) == "-t" ) {
|
||||
nThreads = G4UIcommand::ConvertToInt(argv[i+1]);
|
||||
}
|
||||
#endif
|
||||
else if ( G4String(argv[i]) == "-vDefault" ) {
|
||||
verboseBestUnits = false;
|
||||
--i; // this option is not followed with a parameter
|
||||
}
|
||||
else {
|
||||
PrintUsage();
|
||||
return 1;
|
||||
}
|
||||
}
|
||||
|
||||
// Detect interactive mode (if no macro provided) and define UI session
|
||||
//
|
||||
G4UIExecutive* ui = nullptr;
|
||||
if ( ! macro.size() ) {
|
||||
ui = new G4UIExecutive(argc, argv, session);
|
||||
}
|
||||
|
||||
// Optionally: choose a different Random engine...
|
||||
// G4Random::setTheEngine(new CLHEP::MTwistEngine);
|
||||
|
||||
// Use G4SteppingVerboseWithUnits
|
||||
if ( verboseBestUnits ) {
|
||||
G4int precision = 4;
|
||||
G4SteppingVerbose::UseBestUnit(precision);
|
||||
}
|
||||
|
||||
// Construct the default run manager
|
||||
//
|
||||
auto* runManager =
|
||||
G4RunManagerFactory::CreateRunManager(G4RunManagerType::Default);
|
||||
#ifdef G4MULTITHREADED
|
||||
if ( nThreads > 0 ) {
|
||||
runManager->SetNumberOfThreads(nThreads);
|
||||
}
|
||||
#endif
|
||||
|
||||
GeometryDescriptor * cw = new GeometryDescriptor();
|
||||
cw->addLayer(1, "G4_Pb", false);
|
||||
cw->addLayer(10, "G4_Si", true, 9);
|
||||
cw->addLayer(1, "G4_Pb", false);
|
||||
cw->addLayer(20, "G4_Si", true, 15);
|
||||
cw->addLayer(4, "G4_Pb", false);
|
||||
cw->addLayer(3, "G4_Si", true, 23);
|
||||
|
||||
|
||||
// Set mandatory initialization classes
|
||||
//
|
||||
auto detConstruction = new B4::DetectorConstruction(cw);
|
||||
|
||||
runManager->SetUserInitialization(detConstruction);
|
||||
|
||||
auto physicsList = new FTFP_BERT;
|
||||
runManager->SetUserInitialization(physicsList);
|
||||
|
||||
auto actionInitialization = new B4a::ActionInitialization(detConstruction);
|
||||
runManager->SetUserInitialization(actionInitialization);
|
||||
|
||||
actionInitialization->setGeneratorProperties(100, 1000, "e-");
|
||||
|
||||
// Initialize visualization
|
||||
//
|
||||
auto visManager = new G4VisExecutive;
|
||||
// G4VisExecutive can take a verbosity argument - see /vis/verbose guidance.
|
||||
// G4VisManager* visManager = new G4VisExecutive("Quiet");
|
||||
visManager->Initialize();
|
||||
|
||||
// Get the pointer to the User Interface manager
|
||||
auto UImanager = G4UImanager::GetUIpointer();
|
||||
|
||||
// Process macro or start UI session
|
||||
//
|
||||
if ( macro.size() ) {
|
||||
// batch mode
|
||||
G4String command = "/control/execute ";
|
||||
UImanager->ApplyCommand(command+macro);
|
||||
}
|
||||
else {
|
||||
// interactive mode : define UI session
|
||||
UImanager->ApplyCommand("/control/execute init_vis.mac");
|
||||
if (ui->IsGUI()) {
|
||||
UImanager->ApplyCommand("/control/execute gui.mac");
|
||||
}
|
||||
ui->SessionStart();
|
||||
delete ui;
|
||||
}
|
||||
|
||||
// Job termination
|
||||
// Free the store: user actions, physics_list and detector_description are
|
||||
// owned and deleted by the run manager, so they should not be deleted
|
||||
// in the main() program !
|
||||
|
||||
delete visManager;
|
||||
delete runManager;
|
||||
delete cw;
|
||||
return 0;
|
||||
}
|
||||
|
||||
//later
|
||||
//class Runner {
|
||||
//public:
|
||||
// void initialize(GeometryDescriptor CW, bool gui=false);
|
||||
// void run(int nEvents, std::string partSpecies, double minEnergy, double maxEnergy);
|
||||
//}
|
||||
|
||||
void run(GeometryDescriptor CW, int nEvents, std::string partSpecies, double minEnergy, double maxEnergy, bool gui=false){
|
||||
|
||||
char* argv[]={(char*)"dummy"};
|
||||
|
||||
// Construct the default run manager
|
||||
//
|
||||
auto* runManager =
|
||||
G4RunManagerFactory::CreateRunManager(G4RunManagerType::Default);
|
||||
runManager->SetNumberOfThreads(1);
|
||||
|
||||
GeometryDescriptor * cw = &CW;
|
||||
G4String session;
|
||||
G4UIExecutive* ui = nullptr;
|
||||
if ( gui ) {
|
||||
ui = new G4UIExecutive((int)1, argv, session);
|
||||
}
|
||||
|
||||
// Set mandatory initialization classes
|
||||
//
|
||||
auto detConstruction = new B4::DetectorConstruction(cw);
|
||||
|
||||
runManager->SetUserInitialization(detConstruction);
|
||||
|
||||
auto physicsList = new FTFP_BERT;
|
||||
runManager->SetUserInitialization(physicsList);
|
||||
|
||||
auto actionInitialization = new B4a::ActionInitialization(detConstruction);
|
||||
runManager->SetUserInitialization(actionInitialization);
|
||||
|
||||
actionInitialization->setGeneratorProperties(minEnergy, maxEnergy, partSpecies);
|
||||
|
||||
// Initialize visualization
|
||||
//
|
||||
auto visManager = new G4VisExecutive;
|
||||
// G4VisExecutive can take a verbosity argument - see /vis/verbose guidance.
|
||||
// G4VisManager* visManager = new G4VisExecutive("Quiet");
|
||||
visManager->Initialize();
|
||||
|
||||
// Get the pointer to the User Interface manager
|
||||
auto UImanager = G4UImanager::GetUIpointer();
|
||||
|
||||
// Process macro or start UI session
|
||||
//
|
||||
|
||||
|
||||
if ( gui ) {
|
||||
// interactive mode : define UI session
|
||||
UImanager->ApplyCommand("/control/execute init_vis.mac");
|
||||
if (ui->IsGUI()) {
|
||||
UImanager->ApplyCommand("/control/execute gui.mac");
|
||||
}
|
||||
ui->SessionStart();
|
||||
delete ui;
|
||||
}
|
||||
else {
|
||||
G4String command = "/control/execute run1.mac";
|
||||
UImanager->ApplyCommand("/run/initialize");
|
||||
UImanager->ApplyCommand("/run/beamOn "+ std::to_string(nEvents));
|
||||
}
|
||||
|
||||
|
||||
// Job termination
|
||||
// Free the store: user actions, physics_list and detector_description are
|
||||
// owned and deleted by the run manager, so they should not be deleted
|
||||
// in the main() program !
|
||||
delete visManager;
|
||||
delete runManager;
|
||||
|
||||
}
|
||||
|
||||
int main(){
|
||||
|
||||
GeometryDescriptor cw;
|
||||
//to be moved
|
||||
cw.addLayer(1, "G4_Pb", false);
|
||||
cw.addLayer(10, "G4_Si", true, 9);
|
||||
cw.addLayer(1, "G4_Pb", false);
|
||||
cw.addLayer(20, "G4_Si", true, 15);
|
||||
cw.addLayer(4, "G4_Pb", false);
|
||||
cw.addLayer(3, "G4_Si", true, 23);
|
||||
|
||||
G4System builder(true);
|
||||
builder.init(cw);
|
||||
//builder.run_gui();
|
||||
std::vector<std::string> parts = {"e-"};
|
||||
builder.run_batch(10000,parts , 1, 100);
|
||||
|
||||
//run(cw, 1000, "e-", 1, 100, true);
|
||||
|
||||
return 0;
|
||||
}
|
||||
|
||||
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
|
||||
|
||||
-1111
File diff suppressed because it is too large
Load Diff
@@ -1,37 +0,0 @@
|
||||
#
|
||||
# This file permits to customize, with commands,
|
||||
# the menu bar of the G4UIXm, G4UIQt, G4UIWin32 sessions.
|
||||
# It has no effect with G4UIterminal.
|
||||
#
|
||||
# File menu :
|
||||
/gui/addMenu file File
|
||||
/gui/addButton file Quit exit
|
||||
#
|
||||
# Run menu :
|
||||
/gui/addMenu run Run
|
||||
/gui/addButton run "beamOn 1" "/run/beamOn 1"
|
||||
/gui/addButton run run1 "/control/execute run1.mac"
|
||||
#
|
||||
# Gun menu :
|
||||
/gui/addMenu gun Gun
|
||||
/gui/addButton gun "50 MeV" "/gun/energy 50 MeV"
|
||||
/gui/addButton gun "1 GeV" "/gun/energy 1 GeV"
|
||||
/gui/addButton gun "10 GeV" "/gun/energy 10 GeV"
|
||||
/gui/addButton gun "e-" "/gun/particle e-"
|
||||
/gui/addButton gun "pi0" "/gun/particle pi0"
|
||||
/gui/addButton gun "pi+" "/gun/particle pi+"
|
||||
/gui/addButton gun "neutron" "/gun/particle neutron"
|
||||
/gui/addButton gun "proton" "/gun/particle proton"
|
||||
#
|
||||
# Viewer menu :
|
||||
/gui/addMenu viewer Viewer
|
||||
/gui/addButton viewer "Set style surface" "/vis/viewer/set/style surface"
|
||||
/gui/addButton viewer "Set style wireframe" "/vis/viewer/set/style wireframe"
|
||||
/gui/addButton viewer "Refresh viewer" "/vis/viewer/refresh"
|
||||
/gui/addButton viewer "Update viewer (interaction or end-of-file)" "/vis/viewer/update"
|
||||
/gui/addButton viewer "Flush viewer (= refresh + update)" "/vis/viewer/flush"
|
||||
/gui/addButton viewer "Update scene" "/vis/scene/notifyHandlers"
|
||||
#
|
||||
# To limit the output flow in the "dump" widget :
|
||||
/run/printProgress 100
|
||||
#
|
||||
@@ -1,17 +0,0 @@
|
||||
# Macro file for the initialization of example B4
|
||||
# in interactive session
|
||||
#
|
||||
# Set some default verbose
|
||||
#
|
||||
/control/verbose 2
|
||||
/control/saveHistory
|
||||
/run/verbose 2
|
||||
#
|
||||
# Change the default number of threads (in multi-threaded mode)
|
||||
#/run/numberOfThreads 4
|
||||
#
|
||||
# Initialize kernel
|
||||
/run/initialize
|
||||
#
|
||||
# Visualization setting
|
||||
/control/execute vis.mac
|
||||
-43
@@ -1,43 +0,0 @@
|
||||
// ROOT macro file for plotting example B4 histograms
|
||||
//
|
||||
// Can be run from ROOT session:
|
||||
// root[0] .x plotHisto.C
|
||||
|
||||
{
|
||||
gROOT->Reset();
|
||||
gROOT->SetStyle("Plain");
|
||||
|
||||
// Draw histos filled by Geant4 simulation
|
||||
//
|
||||
|
||||
// Open file filled by Geant4 simulation
|
||||
TFile f("B4.root");
|
||||
|
||||
// Create a canvas and divide it into 2x2 pads
|
||||
TCanvas* c1 = new TCanvas("c1", "", 20, 20, 1000, 1000);
|
||||
c1->Divide(2,2);
|
||||
|
||||
// Draw Eabs histogram in the pad 1
|
||||
c1->cd(1);
|
||||
TH1D* hist1 = (TH1D*)f.Get("Eabs");
|
||||
hist1->Draw("HIST");
|
||||
|
||||
// Draw Labs histogram in the pad 2
|
||||
c1->cd(2);
|
||||
TH1D* hist2 = (TH1D*)f.Get("Labs");
|
||||
hist2->Draw("HIST");
|
||||
|
||||
// Draw Egap histogram in the pad 3
|
||||
// with logaritmic scale for y
|
||||
TH1D* hist3 = (TH1D*)f.Get("Egap");
|
||||
c1->cd(3);
|
||||
gPad->SetLogy(1);
|
||||
hist3->Draw("HIST");
|
||||
|
||||
// Draw Lgap histogram in the pad 4
|
||||
// with logaritmic scale for y
|
||||
c1->cd(4);
|
||||
gPad->SetLogy(1);
|
||||
TH1D* hist4 = (TH1D*)f.Get("Lgap");
|
||||
hist4->Draw("HIST");
|
||||
}
|
||||
@@ -1,42 +0,0 @@
|
||||
// ROOT macro file for plotting example B4 ntuple
|
||||
//
|
||||
// Can be run from ROOT session:
|
||||
// root[0] .x plotNtuple.C
|
||||
|
||||
{
|
||||
gROOT->Reset();
|
||||
gROOT->SetStyle("Plain");
|
||||
|
||||
// Draw histos filled by Geant4 simulation
|
||||
//
|
||||
|
||||
// Open file filled by Geant4 simulation
|
||||
TFile f("B4.root");
|
||||
|
||||
// Create a canvas and divide it into 2x2 pads
|
||||
TCanvas* c1 = new TCanvas("c1", "", 20, 20, 1000, 1000);
|
||||
c1->Divide(2,2);
|
||||
|
||||
// Get ntuple
|
||||
TNtuple* ntuple = (TNtuple*)f.Get("B4");
|
||||
|
||||
// Draw Eabs histogram in the pad 1
|
||||
c1->cd(1);
|
||||
ntuple->Draw("Eabs");
|
||||
|
||||
// Draw Labs histogram in the pad 2
|
||||
c1->cd(2);
|
||||
ntuple->Draw("Labs");
|
||||
|
||||
// Draw Egap histogram in the pad 3
|
||||
// with logaritmic scale for y ?? how to do this?
|
||||
c1->cd(3);
|
||||
gPad->SetLogy(1);
|
||||
ntuple->Draw("Egap");
|
||||
|
||||
// Draw Lgap histogram in the pad 4
|
||||
// with logaritmic scale for y ?? how to do this?
|
||||
c1->cd(4);
|
||||
gPad->SetLogy(1);
|
||||
ntuple->Draw("Egap");
|
||||
}
|
||||
@@ -1,44 +0,0 @@
|
||||
# Macro file for example B4
|
||||
#
|
||||
# Can be run in batch, without graphic
|
||||
# or interactively: Idle> /control/execute run1.mac
|
||||
#
|
||||
# Change the default number of workers (in multi-threading mode)
|
||||
#/run/numberOfThreads 4
|
||||
#
|
||||
# Initialize kernel
|
||||
/run/initialize
|
||||
#
|
||||
# Default kinematics:
|
||||
# electron 50 MeV in direction (0.,0.,1.)
|
||||
# 1 event with tracking/verbose
|
||||
#
|
||||
/tracking/verbose 1
|
||||
/run/beamOn 1
|
||||
#
|
||||
#
|
||||
# muon 300 MeV in direction (0.,0.,1.)
|
||||
# 3 events
|
||||
#
|
||||
/gun/particle mu+
|
||||
/gun/energy 3 MeV
|
||||
/run/beamOn 3
|
||||
#
|
||||
# 20 events
|
||||
#
|
||||
/tracking/verbose 0
|
||||
/run/printProgress 5
|
||||
/run/beamOn 20
|
||||
#
|
||||
# Magnetic field
|
||||
#
|
||||
/globalField/setValue 0.2 0 0 tesla
|
||||
/run/beamOn 3
|
||||
#
|
||||
# Activate/inactivate physics processes
|
||||
#
|
||||
/process/list
|
||||
/process/inactivate eBrem
|
||||
#
|
||||
/run/beamOn 20
|
||||
#
|
||||
@@ -1,17 +0,0 @@
|
||||
# Macro file for example B4
|
||||
#
|
||||
# To be run preferably in batch, without graphics:
|
||||
# % exampleB4[a,b,c,d] run2.mac
|
||||
#
|
||||
#/run/numberOfThreads 4
|
||||
#/control/cout/ignoreThreadsExcept 0
|
||||
#
|
||||
/run/initialize
|
||||
#
|
||||
# Default kinemtics:
|
||||
# electron 50 MeV in direction (0.,0.,1.)
|
||||
# 1000 events
|
||||
#
|
||||
/run/printProgress 100
|
||||
/run/beamOn 1000
|
||||
|
||||
@@ -1,82 +0,0 @@
|
||||
# Macro file for the visualization setting for the initialization phase
|
||||
# of the B4 example when running in interactive mode
|
||||
#
|
||||
|
||||
# Use these open statements to open selected visualization
|
||||
#
|
||||
# Use this open statement to create an OpenGL view:
|
||||
/vis/open OGL 600x600-0+0
|
||||
#
|
||||
# Use this open statement to create an OpenInventor view:
|
||||
#/vis/open OIX
|
||||
#
|
||||
# Use this open statement to create a .prim file suitable for
|
||||
# viewing in DAWN:
|
||||
#/vis/open DAWNFILE
|
||||
#
|
||||
# Use this open statement to create a .heprep file suitable for
|
||||
# viewing in HepRApp:
|
||||
#/vis/open HepRepFile
|
||||
#
|
||||
# Use this open statement to create a .wrl file suitable for
|
||||
# viewing in a VRML viewer:
|
||||
#/vis/open VRML2FILE
|
||||
#
|
||||
# Disable auto refresh and quieten vis messages whilst scene and
|
||||
# trajectories are established:
|
||||
/vis/viewer/set/autoRefresh false
|
||||
/vis/verbose errors
|
||||
#
|
||||
# Draw geometry:
|
||||
/vis/drawVolume
|
||||
#
|
||||
# Specify view angle:
|
||||
/vis/viewer/set/viewpointThetaPhi 90. 180.
|
||||
#
|
||||
# Specify zoom value:
|
||||
#/vis/viewer/zoom 2.
|
||||
#
|
||||
# Specify style (surface, wireframe, auxiliary edges,...)
|
||||
#/vis/viewer/set/style wireframe
|
||||
#/vis/viewer/set/auxiliaryEdge true
|
||||
#/vis/viewer/set/lineSegmentsPerCircle 100
|
||||
#
|
||||
# Draw coordinate axes:
|
||||
#/vis/scene/add/axes 0 0 0 1 m
|
||||
#
|
||||
# Draw smooth trajectories at end of event, showing trajectory points
|
||||
# as markers 2 pixels wide:
|
||||
/vis/scene/add/trajectories smooth
|
||||
/vis/modeling/trajectories/create/drawByCharge
|
||||
/vis/modeling/trajectories/drawByCharge-0/default/setDrawStepPts true
|
||||
/vis/modeling/trajectories/drawByCharge-0/default/setStepPtsSize 1
|
||||
# (if too many tracks cause core dump => /tracking/storeTrajectory 0)
|
||||
#
|
||||
# Draw hits at end of event:
|
||||
#/vis/scene/add/hits
|
||||
#
|
||||
# To draw only gammas:
|
||||
#/vis/filtering/trajectories/create/particleFilter
|
||||
#/vis/filtering/trajectories/particleFilter-0/add gamma
|
||||
#
|
||||
# To invert the above, drawing all particles except gammas,
|
||||
# keep the above two lines but also add:
|
||||
#/vis/filtering/trajectories/particleFilter-0/invert true
|
||||
#
|
||||
# Many other options are available with /vis/modeling and /vis/filtering.
|
||||
# For example, to select colour by particle ID:
|
||||
#/vis/modeling/trajectories/create/drawByParticleID
|
||||
#/vis/modeling/trajectories/drawByParticleID-0/default/setDrawStepPts true
|
||||
# To select or override default colours (note: e+ is blue by default):
|
||||
#/vis/modeling/trajectories/list
|
||||
#/vis/modeling/trajectories/drawByParticleID-0/set e+ yellow
|
||||
#
|
||||
# To superimpose all of the events from a given run:
|
||||
/vis/scene/endOfEventAction accumulate
|
||||
#
|
||||
# Re-establish auto refreshing and verbosity:
|
||||
/vis/viewer/set/autoRefresh true
|
||||
/vis/verbose warnings
|
||||
#
|
||||
# For file-based drivers, use this to create an empty detector view:
|
||||
#/vis/viewer/flush
|
||||
Reference in New Issue
Block a user