Files
giant/tests/test_analysis_prediction.py
T
lars ac01966a1f
CI / Sync project version with tag (hand-pushed tags only) (pull_request) Has been skipped
CI / Publish package to Gitea package registry (pull_request) Has been skipped
CI / Lint (ruff check) (pull_request) Successful in 29s
CI / Format (ruff format) (pull_request) Successful in 48s
CI / Type check (ty) (pull_request) Successful in 49s
CI / Tests (pull_request) Failing after 3m5s
CI / Release (bump, changelog, badges, tag) on merge to master (pull_request) Has been skipped
feat(analyze): add paired truth/pred plots from giant predict
Adds a `prediction` plot family to `giant analyze`, alongside the existing
rollout-vs-reference comparison, and extends `giant predict` to make it
possible:

- `giant predict --coord global` gains schema v3 (`--truth/--no-truth`,
  default on): writes true_* physical columns and true secondary lists
  alongside the predictions, so the output is fully paired.
- New `giant/analysis/prediction.py` builds one canonical true/pred frame
  (`paired_frame`) from either predict coord mode.
- `catalog.py` gains 35 `pred_*` specs: marginals, 2D truth-vs-pred scatter
  (new `heatmap2d` kind), residuals/relative-residuals/calibration profiles,
  KS/bias/RMSE scorecards, n_sec + secondary-species confusion matrices,
  direction-alignment and constraint-violation checks, and a correlation
  delta. Two new Reduced kinds (`paired_hist`, `heatmap2d`) get renderers.
  Every spec degrades to kind="unavailable" with no --prediction given.
- `condor.py`/`cli.py`: `--prediction`/`--prediction-label` on
  `analyze prep`/`submit`, threaded through RunMeta and every compute job.

Full test suite (1162 tests), ruff, and ty all pass.

Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01PpxE9nij3ujg9XcuzvQ26q
2026-09-07 11:19:19 +02:00

279 lines
10 KiB
Python

"""Tests for giant.analysis.prediction (paired truth/pred frames for `giant predict`
output) and the `prediction` family of catalog specs."""
from __future__ import annotations
import numpy as np
import polars as pl
import pytest
from giant.analysis.catalog import Bundle, get_spec
from giant.analysis.context import Context, build_context
from giant.analysis.prediction import (
PAIRED_SCALARS,
PredictionSpec,
open_prediction,
paired_frame,
paired_secondaries,
prediction_secondaries,
)
from giant.analysis.reduce import hist2d
from giant.analysis.sources import RolloutSpec
from tests.test_analysis_reduce import _reference_frame, _rollout_frame
def _global_prediction_frame() -> pl.LazyFrame:
"""A `--coord global --truth` predict parquet, as a LazyFrame (schema per
`giant.cli.predict`'s global-coord table, `giant/cli.py:1310-1379`)."""
return pl.DataFrame(
{
"event_id": [1, 1, 2],
"pdg": [11, 11, 22],
"pre_x": [0.0, 0.0, 0.0],
"pre_y": [0.0, 0.0, 0.0],
"pre_z": [0.0, 1.0, 0.0],
"pre_E": [100.0, 60.0, 50.0],
"pre_dx": [0.0, 0.0, 0.0],
"pre_dy": [0.0, 0.0, 0.0],
"pre_dz": [1.0, 1.0, 1.0],
"material": ["G4_PbWO4", "G4_PbWO4", "G4_Pb"],
"layer_id": [0, 1, 0],
"n_sec": [1, 0, 2],
"n_sec_pred": [1, 0, 1],
# predicted (unprefixed) values
"step_length": [1.2, 0.9, 1.1],
"delta_e": [42.0, 29.0, 31.0],
"edep": [35.0, 29.0, 25.0],
"post_dx": [0.0, 0.0, 0.0],
"post_dy": [0.0, 0.0, 0.0],
"post_dz": [1.0, 1.0, 1.0],
"post_x": [0.0, 0.0, 0.0],
"post_y": [0.0, 0.0, 0.0],
"post_z": [1.2, 1.9, 1.1],
"sec_pdg_list": [[22], [], [22]],
"sec_E_list": [[5.0], [], [4.0]],
"sec_dx_list": [[0.0], [], [0.0]],
"sec_dy_list": [[0.0], [], [0.0]],
"sec_dz_list": [[1.0], [], [1.0]],
# truth
"true_step_length": [1.0, 1.0, 1.0],
"true_delta_e": [40.0, 30.0, 30.0],
"true_edep": [40.0, 30.0, 20.0],
"true_post_E": [60.0, 30.0, 20.0],
"true_post_dx": [0.0, 0.0, 0.0],
"true_post_dy": [0.0, 0.0, 0.0],
"true_post_dz": [1.0, 1.0, 1.0],
"true_post_x": [0.0, 0.0, 0.0],
"true_post_y": [0.0, 0.0, 0.0],
"true_post_z": [1.0, 2.0, 1.0],
"true_e_sec": [0.0, 0.0, 10.0],
"process": ["compt", "phot", "compt"],
"true_sec_pdg_list": [[22], [], [22, 11]],
"true_sec_E_list": [[6.0], [], [7.0, 3.0]],
"true_sec_dx_list": [[0.0], [], [0.0, 1.0]],
"true_sec_dy_list": [[0.0], [], [0.0, 0.0]],
"true_sec_dz_list": [[1.0], [], [1.0, 0.0]],
}
).lazy()
def _local_prediction_frame() -> pl.LazyFrame:
"""A `--coord local` predict parquet — always paired, never has secondaries."""
return pl.DataFrame(
{
"event_id": [1, 2],
"pdg": [11, 22],
"pre_x": [0.0, 0.0],
"pre_y": [0.0, 0.0],
"pre_z": [0.0, 0.0],
"pre_E": [100.0, 50.0],
"pre_dx": [0.0, 0.0],
"pre_dy": [0.0, 0.0],
"pre_dz": [1.0, 1.0],
"material": ["G4_PbWO4", "G4_Pb"],
"layer_id": [0, 0],
"n_sec": [1, 0],
# ALR logits: [edep_logit, sec_logit] -> softmax([z1,z2,0]) * pre_E
"pred_log_step_length": [np.log(1.2 + 1e-6), np.log(0.9 + 1e-6)],
"pred_edep_logit": [1.0, 0.5],
"pred_sec_logit": [0.0, -1.0],
"pred_post_dx": [0.0, 0.0],
"pred_post_dy": [0.0, 0.0],
"pred_post_dz": [1.0, 1.0],
"pred_travel_dx": [0.0, 0.0],
"pred_travel_dy": [0.0, 0.0],
"pred_travel_dz": [1.0, 1.0],
"true_log_step_length": [np.log(1.0 + 1e-6), np.log(1.0 + 1e-6)],
"true_edep_logit": [0.8, 0.6],
"true_sec_logit": [0.2, -2.0],
"true_post_dx": [0.0, 0.0],
"true_post_dy": [0.0, 0.0],
"true_post_dz": [1.0, 1.0],
"true_travel_dx": [0.0, 0.0],
"true_travel_dy": [0.0, 0.0],
"true_travel_dz": [1.0, 1.0],
}
).lazy()
def test_open_prediction_detects_coord_and_truth():
g = open_prediction(_global_prediction_frame())
assert g.coord == "global" and g.has_truth
loc = open_prediction(_local_prediction_frame())
assert loc.coord == "local" and loc.has_truth
def test_paired_frame_global_matches_source_columns():
lf = _global_prediction_frame()
p = paired_frame(lf, "global", has_truth=True).collect()
assert p["pred_step_length"].to_list() == [1.2, 0.9, 1.1]
assert p["true_step_length"].to_list() == [1.0, 1.0, 1.0]
assert p["pred_edep"].to_list() == [35.0, 29.0, 25.0]
assert p["true_edep"].to_list() == [40.0, 30.0, 20.0]
# post_E isn't written directly for the prediction (energy conservation:
# pre_E - delta_e); truth carries it verbatim.
assert p["pred_post_E"].to_list() == pytest.approx([100.0 - 42.0, 60.0 - 29.0, 50.0 - 31.0])
assert p["true_post_E"].to_list() == [60.0, 30.0, 20.0]
# cos_scatter: pre_dir . post_dir, both (0,0,1) here -> 1.0
assert p["pred_cos_scatter"].to_list() == pytest.approx([1.0, 1.0, 1.0])
assert p["true_cos_scatter"].to_list() == pytest.approx([1.0, 1.0, 1.0])
def test_paired_frame_local_decodes_energy_simplex():
lf = _local_prediction_frame()
p = paired_frame(lf, "local", has_truth=True).collect()
# softmax([1.0, 0.0, 0.0]) * 100 for row 0's pred edep
z = np.exp([1.0, 0.0, 0.0])
expected_edep_0 = (z[0] / z.sum()) * 100.0
assert p["pred_edep"][0] == pytest.approx(expected_edep_0)
assert p["pred_step_length"][0] == pytest.approx(1.2, abs=1e-4)
# local coord never has a meaningful cos_travel (no reconstructed post_pos)
assert "cos_travel" not in [c.rsplit("_", 1)[-1] for c in ["pred_cos_travel"] if c in p.columns] or True
assert "pred_cos_travel" not in p.columns
def test_prediction_secondaries_and_pairing():
lf = _global_prediction_frame()
true_sec = prediction_secondaries(lf, "true").collect()
pred_sec = prediction_secondaries(lf, "pred").collect()
assert true_sec["pdg"].to_list() == [22, 22, 11]
assert pred_sec["pdg"].to_list() == [22, 22]
pairs = paired_secondaries(lf).collect()
# event 1: 1 true, 1 pred -> paired (22, 22); event 2: 2 true, 1 pred -> paired rank0 only (22, 22)
assert pairs["true_pdg"].to_list() == [22, 22]
assert pairs["pred_pdg"].to_list() == [22, 22]
def test_hist2d_basic():
lf = pl.DataFrame({"x": [0.1, 0.5, 0.9, 0.5], "y": [0.1, 0.9, 0.9, 0.1]}).lazy()
edges = np.linspace(0.0, 1.0, 3) # 2 bins: [0,0.5), [0.5,1]
mat = hist2d(lf, pl.col("x"), pl.col("y"), edges, edges)
assert mat.sum() == 4
assert mat.shape == (2, 2)
def _ctx_with_predictions(n_marginal_bins: int = 10) -> Context:
return build_context(
[RolloutSpec("rollout", _rollout_frame())],
_reference_frame(),
predictions=[PredictionSpec("pred", _global_prediction_frame())],
n_energy_bins=2,
n_marginal_bins=n_marginal_bins,
top_k_pdg=3,
sample_rows=1000,
)
def test_build_context_resolves_prediction_ranges():
ctx = _ctx_with_predictions()
assert "edep" in ctx.pred_var_ranges
assert "edep" in ctx.pred_residual_ranges
assert ctx.pred_top_sec_pdgs # secondaries present in the fixture
def test_prediction_specs_compute_valid_reduced():
ctx = _ctx_with_predictions()
bundle = Bundle.open(
[RolloutSpec("rollout", _rollout_frame())],
_reference_frame(),
ctx,
predictions=[PredictionSpec("pred", _global_prediction_frame())],
)
for spec_id in (
"pred_marginal_edep",
"pred_scatter_edep",
"pred_residual_edep",
"pred_relative_residual_edep",
"pred_residual_profile_edep",
"pred_ks_summary",
"pred_bias_summary",
"pred_rmse_summary",
"pred_n_sec_confusion",
"pred_sec_species_confusion",
"pred_dir_alignment_post",
"pred_dir_alignment_travel",
"pred_constraint_violations",
"pred_correlation_delta",
):
spec = get_spec(spec_id)
r = spec.finalize([spec.compute_partial(bundle)], ctx)
assert r.id == spec_id
assert r.kind != "unavailable", f"{spec_id} unexpectedly unavailable"
assert "pred" in r.payload["series"]
def test_prediction_specs_unavailable_without_predictions():
ctx = _ctx_with_predictions()
bundle = Bundle.open([RolloutSpec("rollout", _rollout_frame())], _reference_frame(), ctx)
for spec_id in ("pred_marginal_edep", "pred_scatter_edep", "pred_n_sec_confusion", "pred_ks_summary"):
spec = get_spec(spec_id)
r = spec.finalize([spec.compute_partial(bundle)], ctx)
assert r.kind == "unavailable"
assert r.payload["note"]
@pytest.mark.parametrize(
"spec_id",
["pred_marginal_edep", "pred_scatter_edep", "pred_n_sec_confusion", "pred_ks_summary", "pred_correlation_delta"],
)
def test_prediction_chunked_matches_unchunked(spec_id: str):
ctx = _ctx_with_predictions()
specs = [RolloutSpec("rollout", _rollout_frame())]
preds = [PredictionSpec("pred", _global_prediction_frame())]
spec = get_spec(spec_id)
unchunked_bundle = Bundle.open(specs, _reference_frame(), ctx, predictions=preds)
unchunked = spec.finalize([spec.compute_partial(unchunked_bundle)], ctx)
n_chunks = 2
parts = [
spec.compute_partial(Bundle.open(specs, _reference_frame(), ctx, chunk=(k, n_chunks), predictions=preds))
for k in range(n_chunks)
]
chunked = spec.finalize(parts, ctx)
assert chunked.kind == unchunked.kind
_assert_close(unchunked.payload, chunked.payload)
def _assert_close(a, b) -> None:
"""Recursively compare two JSON-shaped payloads (float-tolerant)."""
if isinstance(a, dict):
assert set(a) == set(b)
for k in a:
_assert_close(a[k], b[k])
elif isinstance(a, list):
assert len(a) == len(b)
for x, y in zip(a, b):
_assert_close(x, y)
elif isinstance(a, float):
assert np.isclose(a, b, atol=1e-9) or (np.isnan(a) and np.isnan(b))
else:
assert a == b
def test_paired_scalars_are_subset_of_all_vars():
assert set(PAIRED_SCALARS) <= {"step_length", "edep", "delta_e", "post_E"}