482 lines
16 KiB
C++
482 lines
16 KiB
C++
//
|
|
// ********************************************************************
|
|
// * License and Disclaimer *
|
|
// * *
|
|
// * The Geant4 software is copyright of the Copyright Holders of *
|
|
// * the Geant4 Collaboration. It is provided under the terms and *
|
|
// * conditions of the Geant4 Software License, included in the file *
|
|
// * LICENSE and available at http://cern.ch/geant4/license . These *
|
|
// * include a list of copyright holders. *
|
|
// * *
|
|
// * Neither the authors of this software system, nor their employing *
|
|
// * institutes,nor the agencies providing financial support for this *
|
|
// * work make any representation or warranty, express or implied, *
|
|
// * regarding this software system or assume any liability for its *
|
|
// * use. Please see the license in the file LICENSE and URL above *
|
|
// * for the full disclaimer and the limitation of liability. *
|
|
// * *
|
|
// * This code implementation is the result of the scientific and *
|
|
// * technical work of the GEANT4 collaboration. *
|
|
// * By using, copying, modifying or distributing the software (or *
|
|
// * any work based on the software) you agree to acknowledge its *
|
|
// * use in resulting scientific publications, and indicate your *
|
|
// * acceptance of all terms of the Geant4 Software license. *
|
|
// ********************************************************************
|
|
//
|
|
|
|
// Author: Ivana Hrivnacova, 21/11/2018 (ivana@ipno.in2p3.fr)
|
|
|
|
#include "G4RootMpiPNtupleManager.hh"
|
|
|
|
#include "tools/wroot/file"
|
|
#include "tools/wroot/mpi_ntuple_column_wise"
|
|
#include "tools/wroot/mpi_ntuple_row_wise"
|
|
|
|
#include "G4AnalysisUtilities.hh"
|
|
#include "G4RootFileManager.hh"
|
|
|
|
using namespace G4Analysis;
|
|
|
|
const int kTAG_NTUPLE = 1004; // This constant is defined in G4MPImanager
|
|
// (should be passed from the application)
|
|
namespace
|
|
{
|
|
|
|
//_____________________________________________________________________________
|
|
void NotExistException(const G4String& what, G4int id, const G4String& functionName)
|
|
{
|
|
G4String inFunction = "G4RootMpiPNtupleManager::";
|
|
inFunction += functionName;
|
|
G4ExceptionDescription description;
|
|
description << what << " id= " << id << " does not exist.";
|
|
G4Exception(inFunction, "Analysis_W011", JustWarning, description);
|
|
}
|
|
|
|
} // namespace
|
|
|
|
//_____________________________________________________________________________
|
|
G4RootMpiPNtupleManager::G4RootMpiPNtupleManager(const G4AnalysisManagerState& state,
|
|
tools::impi* impi, G4int mpiRank,
|
|
G4int destinationRank)
|
|
: G4BaseNtupleManager(state),
|
|
fNtupleVector(),
|
|
fImpi(impi),
|
|
fMpiRank(mpiRank),
|
|
fDestinationRank(destinationRank)
|
|
{}
|
|
|
|
//_____________________________________________________________________________
|
|
G4RootMpiPNtupleManager::~G4RootMpiPNtupleManager()
|
|
{
|
|
for (auto ntupleDescription : fNtupleDescriptionVector) {
|
|
delete ntupleDescription;
|
|
}
|
|
}
|
|
|
|
//
|
|
// private functions
|
|
//
|
|
|
|
//_____________________________________________________________________________
|
|
G4RootMpiPNtupleDescription*
|
|
G4RootMpiPNtupleManager::GetNtupleDescriptionInFunction(G4int id, G4String functionName,
|
|
G4bool warn) const
|
|
{
|
|
auto index = id - fFirstId;
|
|
if (index < 0 || index >= G4int(fNtupleDescriptionVector.size())) {
|
|
if (warn) {
|
|
NotExistException("ntuple description", id, functionName);
|
|
}
|
|
return nullptr;
|
|
}
|
|
|
|
return fNtupleDescriptionVector[index];
|
|
}
|
|
|
|
//_____________________________________________________________________________
|
|
tools::wroot::base_pntuple*
|
|
G4RootMpiPNtupleManager::GetNtupleInFunction(G4int id, G4String functionName, G4bool warn) const
|
|
{
|
|
auto ntupleDescription = GetNtupleDescriptionInFunction(id, functionName);
|
|
if (!ntupleDescription) return nullptr;
|
|
|
|
if (!ntupleDescription->GetBasePNtuple()) {
|
|
if (warn) {
|
|
NotExistException("ntuple", id, functionName);
|
|
}
|
|
return nullptr;
|
|
}
|
|
return ntupleDescription->GetBasePNtuple();
|
|
}
|
|
|
|
//
|
|
// protected functions
|
|
//
|
|
|
|
//_____________________________________________________________________________
|
|
void G4RootMpiPNtupleManager::CreateNtuple(G4RootMpiPNtupleDescription* ntupleDescription)
|
|
{
|
|
Message(kVL4, "create from booking", "mpi pntuple",
|
|
ntupleDescription->GetDescription().GetNtupleBooking().name());
|
|
|
|
// Wait for the ntuple data from main
|
|
|
|
G4bool verbose = IsVerbose(kVL2);
|
|
|
|
G4cout << "Go to wait_buffer from " << fDestinationRank << G4endl;
|
|
fImpi->pack_reset();
|
|
int probe_src;
|
|
if (!fImpi->wait_buffer(fMpiRank, fDestinationRank, kTAG_NTUPLE, probe_src, verbose)) {
|
|
G4cerr << "G4RootMpiPNtupleManager::CreateNtuple: wait_buffer() failed." << G4endl;
|
|
return;
|
|
}
|
|
G4cout << "After wait_buffer with " << fImpi << G4endl;
|
|
|
|
tools::uint32 mainNtupleId;
|
|
bool rowWise;
|
|
bool byteSwap;
|
|
unsigned int compression;
|
|
tools::wroot::seek seekDirectory;
|
|
tools::uint32 basketSize;
|
|
bool rowMode;
|
|
std::vector<tools::uint32> basketSizes;
|
|
unsigned int basketEntries;
|
|
|
|
if (!fImpi->unpack(mainNtupleId)) {
|
|
G4cerr << "bunpack(byteSwap) failed." << G4endl;
|
|
return;
|
|
}
|
|
// G4cout << "unpack 1" << G4endl;
|
|
|
|
if (!fImpi->bunpack(rowWise)) {
|
|
G4cerr << "bunpack(rowWise) failed." << G4endl;
|
|
return;
|
|
}
|
|
// G4cout << "unpack 1/2" << G4endl;
|
|
|
|
if (!fImpi->bunpack(byteSwap)) {
|
|
G4cerr << "bunpack(byteSwap) failed." << G4endl;
|
|
return;
|
|
}
|
|
// G4cout << "unpack 2" << G4endl;
|
|
|
|
if (!fImpi->unpack(compression)) {
|
|
G4cerr << "unpack(compression) failed." << G4endl;
|
|
return;
|
|
}
|
|
// G4cout << "unpack 3" << G4endl;
|
|
|
|
if (!fImpi->unpack(seekDirectory)) {
|
|
G4cerr << "unpack(seek) failed." << G4endl;
|
|
return;
|
|
}
|
|
// G4cout << "unpack 4" << G4endl;
|
|
|
|
if (rowWise) {
|
|
if (!fImpi->unpack(basketSize)) {
|
|
G4cerr << "unpack(basketSize) failed." << G4endl;
|
|
return;
|
|
}
|
|
}
|
|
else {
|
|
if (!fImpi->bunpack(rowMode)) {
|
|
G4cerr << "bpack(rowMode) failed." << G4endl;
|
|
return;
|
|
}
|
|
if (!fImpi->vunpack(basketSizes)) {
|
|
G4cerr << "vunpack(basketSizes) failed." << G4endl;
|
|
return;
|
|
}
|
|
if (!fImpi->unpack(basketEntries)) {
|
|
G4cerr << "unpack(basketEntries) failed." << G4endl;
|
|
return;
|
|
}
|
|
}
|
|
// G4cout << "unpack 5" << G4endl;
|
|
|
|
// G4cout << "rank = " << fMpiRank
|
|
// << ", verbose = " << verbose
|
|
// << ", mainNtupleId = " << mainNtupleId
|
|
// << ", byteSwap = " << byteSwap
|
|
// << ", compression = " << compression
|
|
// << ", seekDirectory = " << seekDirectory
|
|
// << ", basketSizes.size() = " << basketSizes.size()
|
|
// << G4endl;
|
|
|
|
// Create MPI pntuple
|
|
if (rowWise) {
|
|
tools::wroot::mpi_ntuple_row_wise* ntuple = new tools::wroot::mpi_ntuple_row_wise(
|
|
mainNtupleId, G4cout, byteSwap, compression, seekDirectory, basketSize,
|
|
ntupleDescription->GetDescription().GetNtupleBooking(), verbose);
|
|
ntupleDescription->SetNtuple(ntuple);
|
|
ntupleDescription->SetBasePNtuple(ntuple);
|
|
}
|
|
else {
|
|
tools::wroot::mpi_ntuple_column_wise* ntuple = new tools::wroot::mpi_ntuple_column_wise(
|
|
mainNtupleId, G4cout, byteSwap, compression, seekDirectory, basketSizes,
|
|
ntupleDescription->GetDescription().GetNtupleBooking(), rowMode, basketEntries, verbose);
|
|
ntupleDescription->SetNtuple(ntuple);
|
|
ntupleDescription->SetBasePNtuple(ntuple);
|
|
}
|
|
|
|
ntupleDescription->GetDescription().SetIsNtupleOwner(true);
|
|
ntupleDescription->SetImpi(fImpi);
|
|
// should be not needed
|
|
// pntuple object is not deleted automatically
|
|
fNtupleVector.push_back(ntupleDescription->GetNtuple());
|
|
|
|
Message(kVL3, "create from booking", "mpi pntuple",
|
|
ntupleDescription->GetDescription().GetNtupleBooking().name());
|
|
}
|
|
|
|
//_____________________________________________________________________________
|
|
void G4RootMpiPNtupleManager::CreateNtuplesFromBooking(
|
|
const std::vector<G4NtupleBooking*>& ntupleBookings)
|
|
{
|
|
// Create ntuple from ntuple_booking & the buffer from main rank
|
|
|
|
// G4cout << "Start G4RootMpiPNtupleManager::CreateNtuplesFromBooking" << G4endl;
|
|
|
|
// Do not create ntuples if NtupleVector is not empty
|
|
if (fNtupleVector.size()) return;
|
|
|
|
// Create pntuple descriptions from ntuple booking.
|
|
// auto g4NtupleBookings = fBookingManager->GetNtupleBookingVector();
|
|
for (auto g4NtupleBooking : ntupleBookings) {
|
|
auto ntupleDescription = new G4RootMpiPNtupleDescription(g4NtupleBooking);
|
|
ntupleDescription->SetMainNtupleRank(fDestinationRank);
|
|
fNtupleDescriptionVector.push_back(ntupleDescription);
|
|
}
|
|
|
|
// Create mpi ntuples
|
|
for (auto ntupleDescription : fNtupleDescriptionVector) {
|
|
// Do not create ntuple if it is inactivated
|
|
if (fState.GetIsActivation() && (!ntupleDescription->GetDescription().GetActivation()))
|
|
continue;
|
|
|
|
// Do not create ntuple if it already exists
|
|
if (ntupleDescription->GetNtuple()) continue;
|
|
|
|
Message(kVL4, "create from booking", "mpi pntuple",
|
|
ntupleDescription->GetDescription().GetNtupleBooking().name());
|
|
|
|
// create ntuple
|
|
CreateNtuple(ntupleDescription);
|
|
|
|
// finish created ntuple
|
|
// (nothing to be done ?)
|
|
// FinishTNtuple(ntupleDescription);
|
|
|
|
Message(kVL3, "create from booking", "mpi pntuple",
|
|
ntupleDescription->GetDescription().GetNtupleBooking().name());
|
|
}
|
|
}
|
|
|
|
//_____________________________________________________________________________
|
|
G4int G4RootMpiPNtupleManager::CreateNtuple(G4NtupleBooking* /*booking*/)
|
|
// const G4String& name, const G4String& title)
|
|
{
|
|
// Create pntuple description from g4 ntuple booking
|
|
// Nothing to be done here.
|
|
|
|
return G4Analysis::kInvalidId;
|
|
}
|
|
|
|
//_____________________________________________________________________________
|
|
G4bool G4RootMpiPNtupleManager::FillNtupleIColumn(G4int ntupleId, G4int columnId, G4int value)
|
|
{
|
|
return FillNtupleTColumn<int>(ntupleId, columnId, value);
|
|
}
|
|
|
|
//_____________________________________________________________________________
|
|
G4bool G4RootMpiPNtupleManager::FillNtupleFColumn(G4int ntupleId, G4int columnId, G4float value)
|
|
{
|
|
return FillNtupleTColumn<float>(ntupleId, columnId, value);
|
|
}
|
|
|
|
//_____________________________________________________________________________
|
|
G4bool G4RootMpiPNtupleManager::FillNtupleDColumn(G4int ntupleId, G4int columnId, G4double value)
|
|
{
|
|
return FillNtupleTColumn<double>(ntupleId, columnId, value);
|
|
}
|
|
|
|
//_____________________________________________________________________________
|
|
G4bool G4RootMpiPNtupleManager::FillNtupleSColumn(G4int ntupleId, G4int columnId,
|
|
const G4String& value)
|
|
{
|
|
return FillNtupleTColumn<std::string>(ntupleId, columnId, value);
|
|
}
|
|
|
|
//_____________________________________________________________________________
|
|
G4bool G4RootMpiPNtupleManager::AddNtupleRow(G4int ntupleId)
|
|
{
|
|
if (fState.GetIsActivation() && (!GetActivation(ntupleId))) {
|
|
// G4cout << "Skipping AddNtupleRow for " << ntupleId << G4endl;
|
|
return false;
|
|
}
|
|
|
|
Message(kVL4, "add", "pntuple row", " ntupleId " + to_string(ntupleId));
|
|
|
|
auto ntupleDescription = GetNtupleDescriptionInFunction(ntupleId, "AddNtupleRow");
|
|
if (!ntupleDescription) return false;
|
|
|
|
// if(!_ntuple->add_row(_impi,rank_src,tag)) {
|
|
auto result = ntupleDescription->GetNtuple()->add_row(
|
|
*fImpi, ntupleDescription->GetMainNtupleRank(), kTAG_NTUPLE);
|
|
|
|
if (!result) {
|
|
G4ExceptionDescription description;
|
|
description << " "
|
|
<< " ntupleId " << ntupleId << "adding row has failed.";
|
|
G4Exception("G4RootMpiPNtupleManager::AddNtupleRow()", "Analysis_W002", JustWarning,
|
|
description);
|
|
}
|
|
|
|
Message(kVL3, "add", "pntuple row", " ntupleId " + to_string(ntupleId));
|
|
|
|
return true;
|
|
}
|
|
|
|
//_____________________________________________________________________________
|
|
G4bool G4RootMpiPNtupleManager::Merge()
|
|
{
|
|
// G4cout << "Start G4RootMpiPNtupleManager::Merge" << G4endl;
|
|
|
|
auto finalResult = true;
|
|
|
|
for (auto ntupleDescription : fNtupleDescriptionVector) {
|
|
// skip inactivated ntuples
|
|
if (!ntupleDescription->GetDescription().GetActivation()) continue;
|
|
|
|
// skip if ntuple was already merged and deleted
|
|
// (this happend when the main rank re-opens a new file for merged data)
|
|
if (!ntupleDescription->GetNtuple()) continue;
|
|
|
|
Message(kVL4, "merge", "pntuple",
|
|
ntupleDescription->GetDescription().GetNtupleBooking().name());
|
|
|
|
// G4cout << "call end_fill " << fImpi
|
|
// << " to rank " << ntupleDescription->GetMainNtupleRank()
|
|
// << " pntuple: " << ntupleDescription->GetNtuple() << G4endl;
|
|
auto result = ntupleDescription->GetNtuple()->end_fill(
|
|
*fImpi, ntupleDescription->GetMainNtupleRank(), kTAG_NTUPLE);
|
|
|
|
if (!result) {
|
|
G4ExceptionDescription description;
|
|
description << " "
|
|
<< " ntuple " << ntupleDescription->GetDescription().GetNtupleBooking().name()
|
|
<< "end fill has failed.";
|
|
G4Exception("G4RootMpiPNtupleManager::Merge()", "Analysis_W002", JustWarning, description);
|
|
}
|
|
|
|
delete ntupleDescription->GetNtuple();
|
|
ntupleDescription->SetNtuple(nullptr);
|
|
|
|
Message(kVL3, "merge", "pntuple",
|
|
ntupleDescription->GetDescription().GetNtupleBooking().name());
|
|
}
|
|
|
|
return finalResult;
|
|
}
|
|
|
|
//_____________________________________________________________________________
|
|
G4bool G4RootMpiPNtupleManager::Reset()
|
|
{
|
|
// Reset ntuple description, this will delete ntuple if present and
|
|
// we have its ownership.
|
|
// The ntuples will be recreated with new cycle or new open file.
|
|
|
|
for (auto ntupleDescription : fNtupleDescriptionVector) {
|
|
ntupleDescription->GetDescription().Reset();
|
|
}
|
|
|
|
fNtupleVector.clear();
|
|
|
|
return true;
|
|
}
|
|
|
|
//_____________________________________________________________________________
|
|
void G4RootMpiPNtupleManager::Clear()
|
|
{
|
|
for (auto ntupleDescription : fNtupleDescriptionVector) {
|
|
delete ntupleDescription->GetNtuple();
|
|
}
|
|
|
|
fNtupleDescriptionVector.clear();
|
|
fNtupleVector.clear();
|
|
|
|
Message(kVL2, "clear", "pntuples");
|
|
}
|
|
|
|
//_____________________________________________________________________________
|
|
G4bool G4RootMpiPNtupleManager::Delete(G4int id)
|
|
{
|
|
if (IsVerbose(G4Analysis::kVL4)) {
|
|
Message(G4Analysis::kVL4, "delete", "pntuple ntupleId " + to_string(id));
|
|
}
|
|
|
|
auto ntupleDescription = GetNtupleDescriptionInFunction(id, "Delete", true);
|
|
|
|
if (ntupleDescription == nullptr) return false;
|
|
|
|
// Delete/clear ntuple data
|
|
delete ntupleDescription->GetNtuple();
|
|
ntupleDescription->SetNtuple(nullptr);
|
|
ntupleDescription->SetBasePNtuple(nullptr);
|
|
ntupleDescription->GetMainBranches().clear();
|
|
|
|
// Update ntuple vector
|
|
auto index = id - GetFirstId();
|
|
fNtupleVector[index] = nullptr;
|
|
|
|
Message(G4Analysis::kVL2, "delete", "pntuple ntupleId " + to_string(id));
|
|
|
|
return true;
|
|
}
|
|
|
|
//_____________________________________________________________________________
|
|
|
|
void G4RootMpiPNtupleManager::SetActivation(G4bool activation)
|
|
{
|
|
for (auto ntupleDescription : fNtupleDescriptionVector) {
|
|
ntupleDescription->GetDescription().SetActivation(activation);
|
|
}
|
|
}
|
|
|
|
//_____________________________________________________________________________
|
|
|
|
void G4RootMpiPNtupleManager::SetActivation(G4int ntupleId, G4bool activation)
|
|
{
|
|
auto ntupleDescription = GetNtupleDescriptionInFunction(ntupleId, "SetActivation");
|
|
if (!ntupleDescription) return;
|
|
|
|
ntupleDescription->GetDescription().SetActivation(activation);
|
|
}
|
|
|
|
//_____________________________________________________________________________
|
|
G4bool G4RootMpiPNtupleManager::GetActivation(G4int ntupleId) const
|
|
{
|
|
auto ntupleDescription = GetNtupleDescriptionInFunction(ntupleId, "GetActivation");
|
|
if (!ntupleDescription) return false;
|
|
|
|
return ntupleDescription->GetDescription().GetActivation();
|
|
}
|
|
|
|
//_____________________________________________________________________________
|
|
void G4RootMpiPNtupleManager::SetNewCycle(G4bool value)
|
|
{
|
|
fNewCycle = value;
|
|
}
|
|
|
|
//_____________________________________________________________________________
|
|
G4bool G4RootMpiPNtupleManager::GetNewCycle() const
|
|
{
|
|
return fNewCycle;
|
|
}
|
|
|
|
//_____________________________________________________________________________
|
|
G4int G4RootMpiPNtupleManager::GetNofNtuples() const
|
|
{
|
|
return fNtupleVector.size();
|
|
}
|