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geant4/source/processes/electromagnetic/dna/management/include/G4ITFinder.icc
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2018-12-07 15:15:39 +01:00

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//
// ********************************************************************
// * License and Disclaimer *
// * *
// * The Geant4 software is copyright of the Copyright Holders of *
// * the Geant4 Collaboration. It is provided under the terms and *
// * conditions of the Geant4 Software License, included in the file *
// * LICENSE and available at http://cern.ch/geant4/license . These *
// * include a list of copyright holders. *
// * *
// * Neither the authors of this software system, nor their employing *
// * institutes,nor the agencies providing financial support for this *
// * work make any representation or warranty, express or implied, *
// * regarding this software system or assume any liability for its *
// * use. Please see the license in the file LICENSE and URL above *
// * for the full disclaimer and the limitation of liability. *
// * *
// * This code implementation is the result of the scientific and *
// * technical work of the GEANT4 collaboration. *
// * By using, copying, modifying or distributing the software (or *
// * any work based on the software) you agree to acknowledge its *
// * use in resulting scientific publications, and indicate your *
// * acceptance of all terms of the Geant4 Software license. *
// ********************************************************************
//
//
// Author: Mathieu Karamitros (kara (AT) cenbg . in2p3 . fr)
//
// WARNING : This class is released as a prototype.
// It might strongly evolve or even disapear in the next releases.
//
// History:
// -----------
// 10 Oct 2011 M.Karamitros created
//
// -------------------------------------------------------------------
TEMPLATE
G4ThreadLocal G4ITMANAGER * G4ITMANAGER::fInstance = 0;
TEMPLATE
G4ITMANAGER * G4ITMANAGER::Instance()
{
if (!fInstance) fInstance = new G4ITFinder();
return fInstance;
}
TEMPLATE G4ITMANAGER::G4ITFinder() : G4VITFinder()
{
fVerbose = 0;
G4AllITFinder::Instance()->RegisterManager(this);
}
TEMPLATE G4ITMANAGER::~G4ITFinder()
{
Clear();
fInstance = 0;
}
TEMPLATE
void G4ITMANAGER::Clear()
{
{
TreeMap::iterator it;
for (it = fTree.begin(); it != fTree.end(); it++)
{
if (it->second) delete it->second;
}
fTree.clear();
}
}
TEMPLATE
void G4ITMANAGER::iUpdatePositionMap()
{
fInstance->UpdatePositionMap();
}
TEMPLATE
void G4ITMANAGER::Push(G4Track* track)
{
/*
* If you want to use this class with another type than G4Molecule
* inheriting as well from G4IT, replace T::GetMolecule by GetIT
* and aIT->GetMoleculeID by GetSubITType
*/
T* aIT = T::GetMolecule(track);
aIT->RecordCurrentPositionNTime();
int key = aIT->GetMoleculeID();
if (!(aIT->GetNode()))
{
G4KDNode_Base* node = 0;
TreeMap::iterator it_fTree = fTree.find(key);
if (it_fTree != fTree.end())
{
node = it_fTree->second->Insert(aIT);
}
else
{
G4KDTree* aTree = new G4KDTree();
fTree.insert(std::make_pair(key, aTree));
node = aTree->Insert(aIT);
}
aIT->SetNode(node);
}
}
TEMPLATE
G4KDTreeResultHandle G4ITMANAGER::FindNearest(const G4ThreeVector& position,
int key)
{
TreeMap::iterator it = fTree.find(key);
if (it != fTree.end()) return it->second->Nearest(position);
else
{
return 0;
}
return 0;
}
TEMPLATE
G4KDTreeResultHandle G4ITMANAGER::FindNearest(const T* point0,
int key)
{
if (int(*point0) == key)
{
// DEBUG
// G4cout << "Equal keys !"<< G4endl;
G4KDNode_Base* node0 = point0->GetNode();
if (node0 == 0)
{
G4ExceptionDescription exceptionDescription(
"Bad request : no node found in the IT you are searching "
"closest neighbourg for");
G4Exception("G4ITManager::FindNearest", "ITManager002",
FatalErrorInArgument, exceptionDescription);
return 0; // coverity
}
TreeMap::iterator it = fTree.find(key);
if (it != fTree.end())
{
G4KDTreeResultHandle output(it->second->Nearest(node0));
if (!output)
{
/*
* G4cout << "NO OUTPUT "
* << point0->GetName()
* << " " << key -> GetName()
* << G4endl;
*/
return 0;
}
// G4cout << "OUTPUT" << G4endl;
return output;
}
else
{
// DEBUG
// G4cout << "Pas trouve dans la map"<< key->GetName() << G4endl;
return 0;
}
}
else
{
// DEBUG
// G4cout << "Not equal keys !"<< G4endl;
// const G4ThreeVector& position = point0->GetTrack()->GetPosition() ;
TreeMap::iterator it = fTree.find(key);
if (it != fTree.end())
{
G4KDTreeResultHandle output(it->second->Nearest(*point0));
if (!output)
{
// G4cout << "NO OUTPUT" << G4endl;
return 0;
}
// G4cout << "OUTPUT" << G4endl;
return output;
}
else
{
// DEBUG
// G4cout << "Pas trouve dans la map : "<< key->GetName() << G4endl;
return 0;
}
}
return 0;
}
TEMPLATE
G4KDTreeResultHandle
G4ITMANAGER::FindNearest(const T* source,
const T* type)
{
return FindNearest(source,
int(*type));
}
TEMPLATE
G4KDTreeResultHandle
G4ITMANAGER::FindNearestInRange(const G4ThreeVector& position,
int key,
G4double R)
{
TreeMap::iterator it = fTree.find(key);
if (it != fTree.end()) return it->second->NearestInRange(position, R);
else
{
return 0;
}
return 0;
}
TEMPLATE
G4KDTreeResultHandle G4ITMANAGER::FindNearestInRange(const T* point0,
int key,
G4double R)
{
if (point0->GetMoleculeID() == key)
{
G4KDNode_Base* node0 = point0->GetNode();
TreeMap::iterator it = fTree.find(key);
if (it != fTree.end()) return it->second->NearestInRange(node0, R);
else
{
return 0;
}
}
else
{
TreeMap::iterator it = fTree.find(key);
if (it != fTree.end()) return it->second->NearestInRange(*point0, R);
else
{
return 0;
}
}
return 0;
}
//#define DEBUG_MEM
#ifdef DEBUG_MEM
#include "G4MemStat.hh"
using namespace G4MemStat;
#endif
TEMPLATE
void G4ITMANAGER::UpdatePositionMap()
{
G4KDTree* currentTree = 0;
G4IT* currentIT = 0;
G4KDNode_Base* currentNode = 0;
#if defined (DEBUG_MEM)
MemStat mem_first, mem_second, mem_diff;
#endif
#if defined (DEBUG_MEM)
mem_first = MemoryUsage();
#endif
std::map<int,PriorityList*>& listMap = G4ITTrackHolder::Instance()->GetLists();
std::map<int,PriorityList*>::iterator it = listMap.begin();
std::map<int,PriorityList*>::iterator end = listMap.end();
TreeMap::iterator it_Tree;
for (; it!= end; it++)
{
currentTree = 0;
int key = it->first;
it_Tree = fTree.find(key);
// G4cout << "Box : " << it_Box->first.GetName() << G4endl;
// G4cout << "N tracks : " << currentBox->GetNTrack() << G4endl;
// G4cout << "Will update : " << it_Box->first.GetName() <<G4endl;
if (it_Tree != fTree.end())
{
currentTree = it_Tree->second;
if (currentTree)
{
currentTree->Clear();
//delete currentTree;
//currentTree = 0;
#if defined (DEBUG_MEM)
mem_second = MemoryUsage();
mem_diff = mem_second-mem_first;
G4cout << "\t || MEM || G4ITMANAGER::UpdatePositionMap || "
"after currentTree->Clear(), diff is : " << mem_diff << G4endl;
#endif
}
}
PriorityList* listUnion=it->second;
if(listUnion == 0 || listUnion->GetMainList() == 0
|| listUnion->GetMainList()->empty() )
{
#if defined (DEBUG_MEM)
mem_second = MemoryUsage();
mem_diff = mem_second-mem_first;
G4cout << "\t || MEM || G4ITMANAGER::UpdatePositionMap || "
"In if(currentBox->Empty()), diff is : " << mem_diff << G4endl;
#endif
continue;
}
else
{
if (currentTree == 0)
{
currentTree = new G4KDTree();
fTree[key] = currentTree;
// G4cout << "**** " << "Create new tree for : " << key.GetName()
// << G4endl;
#if defined (DEBUG_MEM)
mem_second = MemoryUsage();
mem_diff = mem_second-mem_first;
G4cout << "\t || MEM || G4ITMANAGER::UpdatePositionMap || "
"after creating tree, diff is : " << mem_diff << G4endl;
#endif
}
G4TrackList* trackList = listUnion->GetMainList();
G4TrackList::iterator __it = trackList->begin();
G4TrackList::iterator __end = trackList->end();
// int i = 0;
// G4cout << "Box : " << key.GetName() << G4endl;
// G4cout << "N tracks : " << currentBox->GetNTrack() << G4endl;
for (; __it != __end; __it++)//, i++)
{
// G4cout << i << G4endl;
// G4cout << "track "
// << currentIT->GetTrack()->GetTrackID()
// << G4endl;
currentIT = GetIT(*__it);
currentNode = currentTree->Insert(currentIT);
/*G4KDNode_Base* */
// currentNode = currentTree->InsertMap(currentIT);
// if(currentIT->GetNode())
// {
// delete currentIT->GetNode();
// No need: deleted when tree is cleared
// }
currentIT->SetNode(currentNode);
#if defined (DEBUG_MEM)
mem_second = MemoryUsage();
mem_diff = mem_second-mem_first;
G4cout << "\t || MEM || G4ITMANAGER::UpdatePositionMap || "
"after currentIT->SetNode(currentNode), diff is : "
<< mem_diff << G4endl;
#endif
}
#if defined (DEBUG_MEM)
mem_second = MemoryUsage();
mem_diff = mem_second-mem_first;
G4cout << "\t || MEM || G4ITMANAGER::UpdatePositionMap || "
"In else{...}, diff is : " << mem_diff << G4endl;
#endif
}
// currentTree->Build();
}
}