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geant4/examples/extended/medical/dna/neuron/include/RunAction.hh
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2018-12-07 15:15:39 +01:00

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//
// ********************************************************************
// * License and Disclaimer *
// * *
// * The Geant4 software is copyright of the Copyright Holders of *
// * the Geant4 Collaboration. It is provided under the terms and *
// * conditions of the Geant4 Software License, included in the file *
// * LICENSE and available at http://cern.ch/geant4/license . These *
// * include a list of copyright holders. *
// * *
// * Neither the authors of this software system, nor their employing *
// * institutes,nor the agencies providing financial support for this *
// * work make any representation or warranty, express or implied, *
// * regarding this software system or assume any liability for its *
// * use. Please see the license in the file LICENSE and URL above *
// * for the full disclaimer and the limitation of liability. *
// * *
// * This code implementation is the result of the scientific and *
// * technical work of the GEANT4 collaboration. *
// * By using, copying, modifying or distributing the software (or *
// * any work based on the software) you agree to acknowledge its *
// * use in resulting scientific publications, and indicate your *
// * acceptance of all terms of the Geant4 Software license. *
// ********************************************************************
//
// This example is provided by the Geant4-DNA collaboration
// Any report or published results obtained using the Geant4-DNA software
// shall cite the following Geant4-DNA collaboration publication:
// Med. Phys. 37 (2010) 4692-4708
// and papers
// M. Batmunkh et al. J Radiat Res Appl Sci 8 (2015) 498-507
// O. Belov et al. Physica Medica 32 (2016) 1510-1520
// The Geant4-DNA web site is available at http://geant4-dna.org
//
// -------------------------------------------------------------------
// November 2016
// -------------------------------------------------------------------
//
/// \file RunAction.hh
/// \brief Definition of the RunAction class
#ifndef RunAction_h
#define RunAction_h 1
#include "G4UserRunAction.hh"
#include "globals.hh"
#include <iostream>
#include "DetectorConstruction.hh"
//
#include "G4ThreeVector.hh"
//class NeuronHitCompartments;
//class NeuronLoadDataFile;
class PrimaryGeneratorAction;
class Run;
class G4Run;
class TrackingAction;
class RunAction : public G4UserRunAction
{
public:
RunAction(DetectorConstruction*, PrimaryGeneratorAction*);
virtual ~RunAction();
virtual void BeginOfRunAction(const G4Run*);
virtual void EndOfRunAction(const G4Run*);
//
void SetRndmFreq(G4int val) {fSaveRndm = val;}
G4int GetRndmFreq() {return fSaveRndm;}
virtual G4Run* GenerateRun();
// Edep in all volume
G4double GetEdepALL(){return fEdepAll;}
void SetEdepALL(G4double vall){ fEdepAll = vall;}
void AddEdepALL (G4double vall)
{
fEdepAll += vall;
fEdepAll_err += vall*vall;
}
// 0. Edep in homogeneous Medium
G4double GetEdepMedium(){return fEdepMedium;}
void SetEdepMedium(G4double vall){ fEdepMedium = vall;}
void AddEdepMedium (G4double vall)
{
fEdepMedium += vall;
fEdepMedium_err += vall*vall;
}
// 1. Edep in Bounding Slice Volume
G4double GetEdepSlice(){return fEdepSlice;}
void SetEdepSlice(G4double vall){ fEdepSlice = vall;}
void AddEdepSlice (G4double vall)
{
fEdepSlice += vall;
fEdepSlice_err += vall*vall;
}
// 2. Edep in Soma volume
G4double GetEdepSoma(){return fEdepSoma;}
void SetEdepSoma(G4double vall){ fEdepSoma = vall;}
void AddEdepSoma (G4double vall)
{
fEdepSoma += vall;
fEdepSoma_err += vall*vall;
}
// 3. Edep in Dendrites volume
G4double GetEdepDend(){return fEdepDend;}
void SetEdepDend(G4double vall){ fEdepDend = vall;}
void AddEdepDend (G4double vall)
{
fEdepDend += vall;
fEdepDend_err += vall*vall;
}
// 4. Edep in Axon volume
G4double GetEdepAxon(){return fEdepAxon;}
void SetEdepAxon(G4double vall){ fEdepAxon = vall;}
void AddEdepAxon (G4double vall)
{
fEdepAxon += vall;
fEdepAxon_err += vall*vall;
}
// 5. Edep in whole Neuron volume
G4double GetEdepNeuron(){return fEdepNeuron;}
void SetEdepNeuron(G4double vall){ fEdepNeuron = vall;}
void AddEdepNeuron (G4double vall)
{
fEdepNeuron += vall;
fEdepNeuron_err += vall*vall;
}
G4int GetNumEvent(){return fNumEvent;}
void SetNumEvent(G4int i){fNumEvent = i;}
private:
/////////////////
// Histogramming
//
void CreateHistogram();
void WriteHistogram();
/////////////////
// Print Info
//
void PrintRunInfo(const G4Run* run);
/////////////////
// Attributes
//
//TrackingAction* fpTrackingAction;
//bool fInitialized;
bool fDebug;
/////////////////////////////////////////////////////
DetectorConstruction* fDetector;
PrimaryGeneratorAction* fPrimary;
//NeuronLoadDataFile * fNeuronLoadParamz;
//NeuronHitCompartments* fCompart;
Run* fRun;
//
// phys
G4double fEdepAll, fEdepAll_err,fEdepMedium, fEdepMedium_err, fEdepSlice,
fEdepSlice_err,fEdepSoma,fEdepSoma_err, fEdepDend, fEdepDend_err,fEdepAxon,
fEdepAxon_err,fEdepNeuron, fEdepNeuron_err;
G4int fNumEvent;
G4int fSaveRndm;
};
#endif