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geant4/examples/extended/medical/dna/neuron/include/DetectorConstruction.hh
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//
// ********************************************************************
// * License and Disclaimer *
// * *
// * The Geant4 software is copyright of the Copyright Holders of *
// * the Geant4 Collaboration. It is provided under the terms and *
// * conditions of the Geant4 Software License, included in the file *
// * LICENSE and available at http://cern.ch/geant4/license . These *
// * include a list of copyright holders. *
// * *
// * Neither the authors of this software system, nor their employing *
// * institutes,nor the agencies providing financial support for this *
// * work make any representation or warranty, express or implied, *
// * regarding this software system or assume any liability for its *
// * use. Please see the license in the file LICENSE and URL above *
// * for the full disclaimer and the limitation of liability. *
// * *
// * This code implementation is the result of the scientific and *
// * technical work of the GEANT4 collaboration. *
// * By using, copying, modifying or distributing the software (or *
// * any work based on the software) you agree to acknowledge its *
// * use in resulting scientific publications, and indicate your *
// * acceptance of all terms of the Geant4 Software license. *
// ********************************************************************
//
// This example is provided by the Geant4-DNA collaboration
// Any report or published results obtained using the Geant4-DNA software
// shall cite the following Geant4-DNA collaboration publication:
// Med. Phys. 37 (2010) 4692-4708
// and papers
// M. Batmunkh et al. J Radiat Res Appl Sci 8 (2015) 498-507
// O. Belov et al. Physica Medica 32 (2016) 1510-1520
// The Geant4-DNA web site is available at http://geant4-dna.org
//
// -------------------------------------------------------------------
// November 2016
// -------------------------------------------------------------------
//
/// \file DetectorConstruction.hh
/// \brief Definition of the DetectorConstruction class
#ifndef DetectorConstruction_h
#define DetectorConstruction_h 1
#include "G4VUserDetectorConstruction.hh"
#include "G4VSolid.hh"
#include "G4UnionSolid.hh"
#include "G4VPhysicalVolume.hh"
#include "G4LogicalVolume.hh"
#include "G4Box.hh"
#include "G4Sphere.hh"
#include "G4Material.hh"
#include "G4NistManager.hh"
#include "G4PVPlacement.hh"
#include "G4UserLimits.hh"
#include "G4VisAttributes.hh"
//
#include "G4PVParameterised.hh"
#include "NeuronLoadDataFile.hh"
#include "G4Tubs.hh"
#include "G4Orb.hh"
#include "G4Ellipsoid.hh"
#include "G4LogicalVolumeStore.hh"
#include "G4PhysicalVolumeStore.hh"
#include "G4SolidStore.hh"
const G4int kMT = 100000;
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....
class G4Region;
class DetectorConstruction : public G4VUserDetectorConstruction
{
public:
DetectorConstruction();
virtual ~DetectorConstruction();
virtual G4VPhysicalVolume* Construct();
G4Region* GetTargetRegion() {return fpRegion;}
// For neuron constructions!
NeuronLoadDataFile * GetNeuronLoadParamz() {return fNeuronLoadParamz;};
const G4VPhysicalVolume* GetsomaPV(G4int i) {return fsomaPV[i];};
const G4VPhysicalVolume* GetdendritePV(G4int i) {return fdendritePV[i];};
const G4VPhysicalVolume* GetaxonPV(G4int i) {return faxonPV[i];};
G4Material* GetTargetMaterial() {return fpWaterMaterial;};
private:
G4Material* fpDefaultMaterial;
G4Material* fpWaterMaterial;
G4Region* fpRegion;
void DefineMaterials();
G4VPhysicalVolume* ConstructDetector();
// For neuron constructions!
NeuronLoadDataFile * fNeuronLoadParamz;
G4bool fCheckOverlaps; // option to activate checking of volumes overlaps
G4VSolid * fsomaS[kMT], *fdendriteS[kMT], *faxonS[kMT];
G4LogicalVolume * fsomaLV[kMT], *fdendriteLV[kMT], *faxonLV[kMT];
G4VPhysicalVolume * fsomaPV[kMT], *fdendritePV[kMT], *faxonPV[kMT];
G4VisAttributes * fSomaColour;
G4VisAttributes * fDendColour;
G4VisAttributes * fAxonColour;
G4VisAttributes * fSpineColour;
G4VisAttributes * fNeuronColour;
public:
G4int GetnbSomacomp() {return fnbSomacomp;} //
G4double GetMassSomacomp (G4int i) {return fMassSomacomp[i];} //
G4double GetMassSomaTot () {return fMassSomaTot;} //
G4ThreeVector GetPosSomacomp(G4int i) {return fPosSomacomp[i];} //
G4int GetnbDendritecomp() {return fnbDendritecomp;} //
G4double GetMassDendcomp (G4int i) {return fMassDendcomp[i];} //
G4double GetMassDendTot () {return fMassDendTot;} //
G4ThreeVector GetPosDendcomp(G4int i) {return fPosDendcomp[i];} //
G4double GetDistADendSoma (G4int i) {return fDistADendSoma[i];} //
G4double GetDistBDendSoma (G4int i) {return fDistBDendSoma[i];} //
G4int GetnbAxoncomp() {return fnbAxoncomp;} //
G4double GetMassAxoncomp (G4int i) {return fMassAxoncomp[i];} //
G4double GetMassAxonTot () {return fMassAxonTot;} //
G4ThreeVector GetPosAxoncomp(G4int i) {return fPosAxoncomp[i];} //
G4double GetDistAxonsoma (G4int i) {return fDistAxonsoma[i];} //
G4double GetTotVolNeuron() {return fTotVolNeuron;}
G4double GetTotSurfNeuron () {return fTotSurfNeuron;}
G4double GetTotMassNeuron () {return fTotMassNeuron;} //
G4double GetTotVolSlice() {return fTotVolSlice;}
G4double GetTotSurfSlice () {return fTotSurfSlice;}
G4double GetTotMassSlice() {return fTotMassSlice;} //
G4double GetTotVolMedium() {return fTotVolMedium;}
G4double GetTotSurfMedium() {return fTotSurfMedium;} //
G4double GetTotMassMedium() {return fTotMassMedium;} //
private:
G4int fnbSomacomp;
G4int fnbDendritecomp;
G4int fnbAxoncomp;
G4ThreeVector * fPosSomacomp ;
G4double * fMassSomacomp ;
G4double fMassSomaTot ;
G4double * fDistADendSoma ;
G4double * fDistBDendSoma ;
G4double * fMassDendcomp ;
G4double fMassDendTot ;
G4ThreeVector * fPosDendcomp ;
G4double * fDistAxonsoma ;
G4double * fMassAxoncomp ;
G4double fMassAxonTot ;
G4ThreeVector * fPosAxoncomp ;
G4double fTotVolNeuron ;
G4double fTotSurfNeuron ;
G4double fTotMassNeuron ;
G4double fTotVolSlice;
G4double fTotSurfSlice ;
G4double fTotMassSlice;
G4double fTotVolMedium ;
G4double fTotSurfMedium ;
G4double fTotMassMedium ;
};
#endif