173 lines
6.5 KiB
C++
173 lines
6.5 KiB
C++
//
|
|
// ********************************************************************
|
|
// * License and Disclaimer *
|
|
// * *
|
|
// * The Geant4 software is copyright of the Copyright Holders of *
|
|
// * the Geant4 Collaboration. It is provided under the terms and *
|
|
// * conditions of the Geant4 Software License, included in the file *
|
|
// * LICENSE and available at http://cern.ch/geant4/license . These *
|
|
// * include a list of copyright holders. *
|
|
// * *
|
|
// * Neither the authors of this software system, nor their employing *
|
|
// * institutes,nor the agencies providing financial support for this *
|
|
// * work make any representation or warranty, express or implied, *
|
|
// * regarding this software system or assume any liability for its *
|
|
// * use. Please see the license in the file LICENSE and URL above *
|
|
// * for the full disclaimer and the limitation of liability. *
|
|
// * *
|
|
// * This code implementation is the result of the scientific and *
|
|
// * technical work of the GEANT4 collaboration. *
|
|
// * By using, copying, modifying or distributing the software (or *
|
|
// * any work based on the software) you agree to acknowledge its *
|
|
// * use in resulting scientific publications, and indicate your *
|
|
// * acceptance of all terms of the Geant4 Software license. *
|
|
// ********************************************************************
|
|
//
|
|
// This example is provided by the Geant4-DNA collaboration
|
|
// Any report or published results obtained using the Geant4-DNA software
|
|
// shall cite the following Geant4-DNA collaboration publication:
|
|
// Med. Phys. 37 (2010) 4692-4708
|
|
// and papers
|
|
// M. Batmunkh et al. J Radiat Res Appl Sci 8 (2015) 498-507
|
|
// O. Belov et al. Physica Medica 32 (2016) 1510-1520
|
|
// The Geant4-DNA web site is available at http://geant4-dna.org
|
|
//
|
|
// -------------------------------------------------------------------
|
|
// November 2016
|
|
// -------------------------------------------------------------------
|
|
//
|
|
/// \file DetectorConstruction.hh
|
|
/// \brief Definition of the DetectorConstruction class
|
|
|
|
#ifndef DetectorConstruction_h
|
|
#define DetectorConstruction_h 1
|
|
|
|
#include "G4VUserDetectorConstruction.hh"
|
|
#include "G4VSolid.hh"
|
|
#include "G4UnionSolid.hh"
|
|
#include "G4VPhysicalVolume.hh"
|
|
#include "G4LogicalVolume.hh"
|
|
#include "G4Box.hh"
|
|
#include "G4Sphere.hh"
|
|
#include "G4Material.hh"
|
|
#include "G4NistManager.hh"
|
|
#include "G4PVPlacement.hh"
|
|
#include "G4UserLimits.hh"
|
|
#include "G4VisAttributes.hh"
|
|
//
|
|
#include "G4PVParameterised.hh"
|
|
#include "NeuronLoadDataFile.hh"
|
|
#include "G4Tubs.hh"
|
|
#include "G4Orb.hh"
|
|
#include "G4Ellipsoid.hh"
|
|
#include "G4LogicalVolumeStore.hh"
|
|
#include "G4PhysicalVolumeStore.hh"
|
|
#include "G4SolidStore.hh"
|
|
|
|
const G4int kMT = 100000;
|
|
|
|
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....
|
|
|
|
class G4Region;
|
|
|
|
class DetectorConstruction : public G4VUserDetectorConstruction
|
|
{
|
|
public:
|
|
|
|
DetectorConstruction();
|
|
virtual ~DetectorConstruction();
|
|
virtual G4VPhysicalVolume* Construct();
|
|
G4Region* GetTargetRegion() {return fpRegion;}
|
|
|
|
// For neuron constructions!
|
|
NeuronLoadDataFile * GetNeuronLoadParamz() {return fNeuronLoadParamz;};
|
|
const G4VPhysicalVolume* GetsomaPV(G4int i) {return fsomaPV[i];};
|
|
const G4VPhysicalVolume* GetdendritePV(G4int i) {return fdendritePV[i];};
|
|
const G4VPhysicalVolume* GetaxonPV(G4int i) {return faxonPV[i];};
|
|
G4Material* GetTargetMaterial() {return fpWaterMaterial;};
|
|
|
|
private:
|
|
G4Material* fpDefaultMaterial;
|
|
G4Material* fpWaterMaterial;
|
|
G4Region* fpRegion;
|
|
|
|
void DefineMaterials();
|
|
G4VPhysicalVolume* ConstructDetector();
|
|
|
|
// For neuron constructions!
|
|
NeuronLoadDataFile * fNeuronLoadParamz;
|
|
G4bool fCheckOverlaps; // option to activate checking of volumes overlaps
|
|
G4VSolid * fsomaS[kMT], *fdendriteS[kMT], *faxonS[kMT];
|
|
G4LogicalVolume * fsomaLV[kMT], *fdendriteLV[kMT], *faxonLV[kMT];
|
|
G4VPhysicalVolume * fsomaPV[kMT], *fdendritePV[kMT], *faxonPV[kMT];
|
|
|
|
G4VisAttributes * fSomaColour;
|
|
G4VisAttributes * fDendColour;
|
|
G4VisAttributes * fAxonColour;
|
|
G4VisAttributes * fSpineColour;
|
|
G4VisAttributes * fNeuronColour;
|
|
|
|
public:
|
|
|
|
G4int GetnbSomacomp() {return fnbSomacomp;} //
|
|
G4double GetMassSomacomp (G4int i) {return fMassSomacomp[i];} //
|
|
G4double GetMassSomaTot () {return fMassSomaTot;} //
|
|
G4ThreeVector GetPosSomacomp(G4int i) {return fPosSomacomp[i];} //
|
|
|
|
G4int GetnbDendritecomp() {return fnbDendritecomp;} //
|
|
G4double GetMassDendcomp (G4int i) {return fMassDendcomp[i];} //
|
|
G4double GetMassDendTot () {return fMassDendTot;} //
|
|
G4ThreeVector GetPosDendcomp(G4int i) {return fPosDendcomp[i];} //
|
|
G4double GetDistADendSoma (G4int i) {return fDistADendSoma[i];} //
|
|
G4double GetDistBDendSoma (G4int i) {return fDistBDendSoma[i];} //
|
|
|
|
G4int GetnbAxoncomp() {return fnbAxoncomp;} //
|
|
G4double GetMassAxoncomp (G4int i) {return fMassAxoncomp[i];} //
|
|
G4double GetMassAxonTot () {return fMassAxonTot;} //
|
|
G4ThreeVector GetPosAxoncomp(G4int i) {return fPosAxoncomp[i];} //
|
|
G4double GetDistAxonsoma (G4int i) {return fDistAxonsoma[i];} //
|
|
|
|
G4double GetTotVolNeuron() {return fTotVolNeuron;}
|
|
G4double GetTotSurfNeuron () {return fTotSurfNeuron;}
|
|
G4double GetTotMassNeuron () {return fTotMassNeuron;} //
|
|
G4double GetTotVolSlice() {return fTotVolSlice;}
|
|
G4double GetTotSurfSlice () {return fTotSurfSlice;}
|
|
G4double GetTotMassSlice() {return fTotMassSlice;} //
|
|
G4double GetTotVolMedium() {return fTotVolMedium;}
|
|
G4double GetTotSurfMedium() {return fTotSurfMedium;} //
|
|
G4double GetTotMassMedium() {return fTotMassMedium;} //
|
|
|
|
private:
|
|
|
|
G4int fnbSomacomp;
|
|
G4int fnbDendritecomp;
|
|
G4int fnbAxoncomp;
|
|
|
|
G4ThreeVector * fPosSomacomp ;
|
|
G4double * fMassSomacomp ;
|
|
G4double fMassSomaTot ;
|
|
|
|
G4double * fDistADendSoma ;
|
|
G4double * fDistBDendSoma ;
|
|
G4double * fMassDendcomp ;
|
|
G4double fMassDendTot ;
|
|
G4ThreeVector * fPosDendcomp ;
|
|
|
|
G4double * fDistAxonsoma ;
|
|
G4double * fMassAxoncomp ;
|
|
G4double fMassAxonTot ;
|
|
G4ThreeVector * fPosAxoncomp ;
|
|
|
|
G4double fTotVolNeuron ;
|
|
G4double fTotSurfNeuron ;
|
|
G4double fTotMassNeuron ;
|
|
G4double fTotVolSlice;
|
|
G4double fTotSurfSlice ;
|
|
G4double fTotMassSlice;
|
|
G4double fTotVolMedium ;
|
|
G4double fTotSurfMedium ;
|
|
G4double fTotMassMedium ;
|
|
|
|
};
|
|
#endif
|