Gabriele Cosmo
346 lines
12 KiB
C++
346 lines
12 KiB
C++
//
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// ********************************************************************
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// * License and Disclaimer *
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// * *
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// * The Geant4 software is copyright of the Copyright Holders of *
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// * the Geant4 Collaboration. It is provided under the terms and *
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// * conditions of the Geant4 Software License, included in the file *
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// * LICENSE and available at http://cern.ch/geant4/license . These *
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// * include a list of copyright holders. *
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// * *
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// * Neither the authors of this software system, nor their employing *
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// * institutes,nor the agencies providing financial support for this *
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// * work make any representation or warranty, express or implied, *
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// * regarding this software system or assume any liability for its *
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// * use. Please see the license in the file LICENSE and URL above *
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// * for the full disclaimer and the limitation of liability. *
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// * *
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// * This code implementation is the result of the scientific and *
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// * technical work of the GEANT4 collaboration. *
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// * By using, copying, modifying or distributing the software (or *
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// * any work based on the software) you agree to acknowledge its *
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// * use in resulting scientific publications, and indicate your *
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// * acceptance of all terms of the Geant4 Software license. *
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// ********************************************************************
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//
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// Previous authors: G. Guerrieri, S. Guatelli, and M. G. Pia, INFN Genova, Italy
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// Authors (since 2007): S. Guatelli, University of Wollongong, Australia
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//
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#include <map>
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#include "globals.hh"
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#include "G4HumanPhantomConstruction.hh"
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#include "G4SystemOfUnits.hh"
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#include "G4HumanPhantomSD.hh"
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#include "G4SDManager.hh"
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//#include "G4VBodyFactory.hh"
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//#include "G4MIRDBodyFactory.hh"
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//#include "G4ORNLBodyFactory.hh"
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#include "G4PhantomBuilder.hh"
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#include "G4FemaleBuilder.hh"
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#include "G4MaleBuilder.hh"
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#include "G4PhantomHeadBuilder.hh"
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#include "G4CustomFemaleBuilder.hh"
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#include "G4RunManager.hh"
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#include "G4HumanPhantomMaterial.hh"
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#include "G4Box.hh"
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#include "G4LogicalVolume.hh"
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#include "G4VPhysicalVolume.hh"
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#include "G4VisAttributes.hh"
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#include "G4Colour.hh"
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#include "G4PVPlacement.hh"
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G4HumanPhantomConstruction::G4HumanPhantomConstruction()
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{
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messenger = new G4HumanPhantomMessenger(this);
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material = new G4HumanPhantomMaterial();
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}
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G4HumanPhantomConstruction::~G4HumanPhantomConstruction()
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{
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delete material;
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delete messenger;
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}
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G4VPhysicalVolume* G4HumanPhantomConstruction::Construct()
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{
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material -> DefineMaterials();
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G4BasePhantomBuilder* builder = 0;
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if (model == "MIRDHead" || model == "ORNLHead")
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{
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G4cout << "HeadBuilder instantiated" << G4endl;
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builder = new G4PhantomHeadBuilder;
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if (model == "MIRDHead") builder->SetModel("MIRD");
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else if (model == "ORNLHead") builder->SetModel("ORNLMale");
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}
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else
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{
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if (sex =="Female")
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{
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if (model == "MIX") builder = new G4CustomFemaleBuilder;
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else {builder = new G4FemaleBuilder;}
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builder->SetModel(model);
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G4cout <<model << " "<< sex << G4endl;
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}
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else if (sex == "Male")
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{
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builder = new G4MaleBuilder;
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builder->SetModel(model);
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if (model == "MIX")
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{
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G4cout<< "Custom Male is not available!!! MIRD model is selected !"
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<< G4endl;
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model = "MIRD";
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builder->SetModel(model);}
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}
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}
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builder->SetMotherVolume(ConstructWorld());
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// the argument indicates the sensitivity of the volume
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builder->BuildHead("black", false, sensitivities["Head"]);
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builder->BuildSkull("orange", false,sensitivities["Skull"]);
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builder->BuildBrain("yellow", true,sensitivities["Brain"]);
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if (model != "MIRDHead" && model != "ORNLHead")
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{
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// builder->SetModel(model);
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builder->BuildTrunk("yellow", false, sensitivities["Trunk"]);
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builder->BuildLeftLeg("yellow", false,sensitivities["LeftLeg"]);
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builder->BuildRightLeg("yellow", false,sensitivities["RightLeg"]);
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builder->BuildLeftArmBone("grey", true,sensitivities["LeftArmBone"]);
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builder->BuildRightArmBone("grey", true, sensitivities["RightArmBone"]);
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builder->BuildLeftLegBone("grey", true,sensitivities["LeftLegBone"]);
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builder ->BuildRightLegBone("grey", true,sensitivities["RightLegBone"]);
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builder->BuildUpperSpine("yellow", true,sensitivities["UpperSpine"]);
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if (model == "MIRD" || model == "MIX")
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{
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builder->BuildLeftScapula("grey", true, sensitivities["LeftScapula"]);
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builder->BuildRightScapula("grey", true, sensitivities["RightScapula"]);
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builder->BuildLeftAdrenal("yellow", true, sensitivities["LeftAdrenal"]);
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builder->BuildRightAdrenal("yellow", true, sensitivities["RightAdrenal"]);
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builder->BuildThymus("orange", true,sensitivities["Thymus"]);
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builder->BuildLeftClavicle("grey", true,sensitivities["LeftClavicle"]);
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builder->BuildRightClavicle("grey", true,sensitivities["RightClavicle"]);
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builder->BuildSmallIntestine("orange", true,sensitivities["SmallIntestine"]);
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builder->BuildRibCage("grey", true,sensitivities["RibCage"]);
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}
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builder->BuildMiddleLowerSpine("yellow", true,sensitivities["MiddleLowerSpine"]);
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builder->BuildPelvis("grey", true,sensitivities["Pelvis"]);
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builder->BuildStomach("orange", true,sensitivities["Stomach"]);
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builder->BuildUpperLargeIntestine("lightBlue", true,sensitivities["UpperLargeIntestine"]);
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builder->BuildLowerLargeIntestine("lightBlue", true,sensitivities["LowerLargeIntestine"]);
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builder->BuildSpleen("green", true,sensitivities["Spleen"]);
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builder->BuildPancreas("purple", true,sensitivities["Pancreas"]);
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//builder->BuildLiver("orange", true,sensitivities["Liver"]);
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builder->BuildLeftKidney("green", true,sensitivities["LeftKidney"]);
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builder->BuildRightKidney("green", true,sensitivities["RightKidney"]);
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builder->BuildUrinaryBladder("green", true,sensitivities["UrinaryBladder"]);
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//builder->BuildHeart("red", true,sensitivities["Hearth"]);// to do MIRD
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// builder->BuildLeftLung("blue", true,sensitivities["LeftLung"]);
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//builder->BuildRightLung("blue", true,sensitivities["RightLung"]);
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// builder->BuildThyroid("orange", true,sensitivities["Thyroid"]);
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if(sex=="Female"){
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builder->BuildLeftOvary("purple", true,sensitivities["LeftOvary"]);
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builder->BuildRightOvary("purple", true,sensitivities["RightOvary"]);
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builder->BuildUterus("purple", true,sensitivities["Uterus"]);
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if (model == "ORNLFemale" || model == "MIRD")
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{
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builder->BuildLeftBreast("purple", true,sensitivities["LeftBreast"]);
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builder->BuildRightBreast("purple", true,sensitivities["RightBreast"]);
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}
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else if (model == "MIX")
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{
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builder->BuildVoxelLeftBreast("purple",false, sensitivities["LeftBreast"]);
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builder->BuildVoxelRightBreast("purple", false, sensitivities["RightBreast"]);
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}
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}
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if(sex=="Male"){
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if (model == "MIRD"){
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builder -> BuildMaleGenitalia("yellow",false,sensitivities["MaleGenitalia"]);
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builder -> BuildLeftTeste("purple",true,sensitivities["LeftTeste"]);
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builder -> BuildRightTeste("purple",true,sensitivities["RightTeste"]);
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}
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else G4cout << "ORNL does not have model for male genitalia and testes yet" << G4endl;
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}
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}
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G4VPhysicalVolume* result=builder->GetPhantom();
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delete builder;
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return result;
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}
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void G4HumanPhantomConstruction::SetBodyPartSensitivity(G4String, G4bool)
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{
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G4cout << "This method is not currently working !!!!" << G4endl;
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}
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G4VPhysicalVolume* G4HumanPhantomConstruction::ConstructWorld()
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{
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G4Material* air = material -> GetMaterial("Air");
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// World Volume
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// G4double worldSize = 1.*m ;
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G4double worldSize = 1.5 *m ;
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G4Box* world = new G4Box("world", worldSize, worldSize, worldSize);
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G4LogicalVolume* logicWorld = new G4LogicalVolume(world,
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air,
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"logicalWorld", 0, 0,0);
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G4VPhysicalVolume* motherVolume = new G4PVPlacement(0,G4ThreeVector(),
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"physicalWorld",
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logicWorld,
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0,
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false,
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0);
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// Visualization Attributes
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G4VisAttributes* WorldVisAtt = new G4VisAttributes(G4Colour(0.94,0.5,0.5));
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WorldVisAtt->SetForceSolid(false);
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logicWorld->SetVisAttributes(G4VisAttributes::GetInvisible());
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return motherVolume;
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}
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void G4HumanPhantomConstruction::SetPhantomSex(G4String newSex)
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{
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sex=newSex;
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if (sex == "Male")
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{
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G4cout << ">> Male Phantom will be built." << G4endl;
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}
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if (sex == "Female")
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{
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G4cout << ">> Female Phantom will be built." << G4endl;
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}
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if ((sex != "Female") && (sex != "Male"))
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G4cout << sex << " can not be defined!" << G4endl;
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}
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void G4HumanPhantomConstruction::SetPhantomModel(G4String newModel)
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{
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model = newModel;
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if (model == "MIRD")
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{
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G4cout<<" >> Phantom " << model << " will be built."<<G4endl;
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}
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if (model == "ORNLFemale")
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{
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G4cout<<" >> Phantom " << model << " will be built."<<G4endl;
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}
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if (model == "ORNLMale")
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{
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G4cout<<" >> Phantom " << model << " will be built."<<G4endl;
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}
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if (model == "MIX")
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{
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G4cout<<" >> Phantom " << model << " will be built."<<G4endl;
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}
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if (model == "MIRDHead")
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{
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G4cout<<" >> Phantom " << model << " will be built."<<G4endl;
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}
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if (model == "ORNLHead")
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{
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G4cout<<" >> Phantom " << model << " will be built."<<G4endl;
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}
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}
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void G4HumanPhantomConstruction::ConstructSDandField()
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{
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G4HumanPhantomSD* SD = new G4HumanPhantomSD("SD", "HumanPhantomCollection");
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G4SDManager::GetSDMpointer()->AddNewDetector(SD);
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if (model != "ORNLMale" && model != "ORNLFemale" && model!= "ORNLHead")
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{
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SetSensitiveDetector("logicalHead",SD);
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SetSensitiveDetector("logicalSkull",SD);
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SetSensitiveDetector("logicalBrain",SD);
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if (model != "MIRDHead")
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{
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SetSensitiveDetector("logicalTrunk",SD);
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SetSensitiveDetector("logicalLeftLeg",SD);
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SetSensitiveDetector("logicalRightLeg",SD);
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SetSensitiveDetector("logicalLeftArmBone",SD);
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SetSensitiveDetector("logicalRightArmBone",SD);
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SetSensitiveDetector("logicalLeftLegBone",SD);
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SetSensitiveDetector("logicalRightLegBone",SD);
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SetSensitiveDetector("logicalUpperSpine",SD);
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SetSensitiveDetector("logicalLeftScapula",SD);
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SetSensitiveDetector("logicalRightScapula",SD);
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SetSensitiveDetector("logicalLeftAdrenal",SD);
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SetSensitiveDetector("logicalRightAdrenal",SD); SetSensitiveDetector("logicalThymus",SD); SetSensitiveDetector("logicalLeftClavicle",SD);
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SetSensitiveDetector("logicalRightClavicle",SD);
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SetSensitiveDetector("logicalSmallIntestine",SD);
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SetSensitiveDetector("logicalRibCage",SD); SetSensitiveDetector("logicalMiddleLowerSpine",SD);
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SetSensitiveDetector("logicalStomach",SD);
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SetSensitiveDetector("logicalUpperLargeIntestine",SD);
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SetSensitiveDetector("logicalLowerLargeIntestine",SD);
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SetSensitiveDetector("logicalSpleen",SD);
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SetSensitiveDetector("logicalPancreas",SD);
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SetSensitiveDetector("logicalLeftKidney",SD);
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SetSensitiveDetector("logicalRightKidney",SD);
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SetSensitiveDetector("logicalUrinaryBladder",SD);
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if(sex=="Female"){
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SetSensitiveDetector("logicalLeftOvary",SD);
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SetSensitiveDetector("logicalRightOvary",SD);
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SetSensitiveDetector("logicalUterus",SD);
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SetSensitiveDetector("logicalLeftBreast",SD);
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SetSensitiveDetector("logicalRightBreast",SD);
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}
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if(sex=="Male"){
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SetSensitiveDetector("logicalMaleGenitalia",SD);
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SetSensitiveDetector("logicalLeftTeste",SD);
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SetSensitiveDetector("logicalRightTeste",SD);
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}
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}
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}else
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{
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SetSensitiveDetector("HeadVolume",SD);
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SetSensitiveDetector("SkullVolume",SD);
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SetSensitiveDetector("BrainVolume",SD);
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G4cout << "Work in progress!!!! " << G4endl;
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G4cout <<"ORNL model!!!! Head is sensitive only!!!" << G4endl;
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}
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}
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