104 lines
4.4 KiB
C++
104 lines
4.4 KiB
C++
//
|
|
// ********************************************************************
|
|
// * License and Disclaimer *
|
|
// * *
|
|
// * The Geant4 software is copyright of the Copyright Holders of *
|
|
// * the Geant4 Collaboration. It is provided under the terms and *
|
|
// * conditions of the Geant4 Software License, included in the file *
|
|
// * LICENSE and available at http://cern.ch/geant4/license . These *
|
|
// * include a list of copyright holders. *
|
|
// * *
|
|
// * Neither the authors of this software system, nor their employing *
|
|
// * institutes,nor the agencies providing financial support for this *
|
|
// * work make any representation or warranty, express or implied, *
|
|
// * regarding this software system or assume any liability for its *
|
|
// * use. Please see the license in the file LICENSE and URL above *
|
|
// * for the full disclaimer and the limitation of liability. *
|
|
// * *
|
|
// * This code implementation is the result of the scientific and *
|
|
// * technical work of the GEANT4 collaboration. *
|
|
// * By using, copying, modifying or distributing the software (or *
|
|
// * any work based on the software) you agree to acknowledge its *
|
|
// * use in resulting scientific publications, and indicate your *
|
|
// * acceptance of all terms of the Geant4 Software license. *
|
|
// ********************************************************************
|
|
//
|
|
/// \file TimeStepAction.cc
|
|
/// \brief Implementation of the TimeStepAction class
|
|
|
|
// This example is provided by the Geant4-DNA collaboration
|
|
// dnadamage3 example is derived from the chem6 example
|
|
// chem6 example authors: W. G. Shin and S. Incerti (CENBG, France)
|
|
//
|
|
// Any report or published results obtained using the Geant4-DNA software
|
|
// shall cite the following Geant4-DNA collaboration publication:
|
|
// J. Appl. Phys. 125 (2019) 104301
|
|
// Med. Phys. 45 (2018) e722-e739
|
|
// J. Comput. Phys. 274 (2014) 841-882
|
|
// Med. Phys. 37 (2010) 4692-4708
|
|
// Int. J. Model. Simul. Sci. Comput. 1 (2010) 157-178
|
|
// The Geant4-DNA web site is available at http://geant4-dna.org
|
|
//
|
|
// Authors: J. Naoki D. Kondo (UCSF, US)
|
|
// J. Ramos-Mendez and B. Faddegon (UCSF, US)
|
|
//
|
|
//
|
|
/// Filtering of molecules by material at the beggining of the chemical stage
|
|
|
|
#include "TimeStepAction.hh"
|
|
|
|
#include "G4Molecule.hh"
|
|
#include "G4Scheduler.hh"
|
|
#include "G4SystemOfUnits.hh"
|
|
#include "G4Track.hh"
|
|
#include "G4UnitsTable.hh"
|
|
|
|
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
|
|
|
|
TimeStepAction::TimeStepAction() : G4UserTimeStepAction() {}
|
|
|
|
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
|
|
|
|
TimeStepAction::TimeStepAction(const TimeStepAction& other) : G4UserTimeStepAction(other) {}
|
|
|
|
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
|
|
|
|
TimeStepAction& TimeStepAction::operator=(const TimeStepAction& rhs)
|
|
{
|
|
if (this == &rhs) return *this; // handle self assignment
|
|
// assignment operator
|
|
return *this;
|
|
}
|
|
|
|
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
|
|
void TimeStepAction::UserPreTimeStepAction()
|
|
{
|
|
G4int Steps = G4Scheduler::Instance()->GetNbSteps();
|
|
|
|
if (Steps == 1) {
|
|
G4TrackManyList* trackList = G4ITTrackHolder::Instance()->GetMainList();
|
|
G4ManyFastLists<G4Track>::iterator it_begin = trackList->begin();
|
|
G4ManyFastLists<G4Track>::iterator it_end = trackList->end();
|
|
|
|
for (; it_begin != it_end; ++it_begin) {
|
|
G4String Material = it_begin->GetStep()->GetPreStepPoint()->GetMaterial()->GetName();
|
|
G4String MoleculeName = GetMolecule(*it_begin)->GetName();
|
|
if (Material != "G4_WATER" && !G4StrUtil::contains(MoleculeName, "DNA")) {
|
|
it_begin->SetTrackStatus(fStopAndKill);
|
|
}
|
|
}
|
|
}
|
|
}
|
|
|
|
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
|
|
|
|
void TimeStepAction::UserPostTimeStepAction() {}
|
|
|
|
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
|
|
|
|
void TimeStepAction::UserReactionAction(const G4Track& /*trackA*/, const G4Track& /*trackB*/,
|
|
const std::vector<G4Track*>* /*products*/)
|
|
{}
|
|
|
|
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
|