83 lines
3.6 KiB
C++
83 lines
3.6 KiB
C++
//
|
|
// ********************************************************************
|
|
// * License and Disclaimer *
|
|
// * *
|
|
// * The Geant4 software is copyright of the Copyright Holders of *
|
|
// * the Geant4 Collaboration. It is provided under the terms and *
|
|
// * conditions of the Geant4 Software License, included in the file *
|
|
// * LICENSE and available at http://cern.ch/geant4/license . These *
|
|
// * include a list of copyright holders. *
|
|
// * *
|
|
// * Neither the authors of this software system, nor their employing *
|
|
// * institutes,nor the agencies providing financial support for this *
|
|
// * work make any representation or warranty, express or implied, *
|
|
// * regarding this software system or assume any liability for its *
|
|
// * use. Please see the license in the file LICENSE and URL above *
|
|
// * for the full disclaimer and the limitation of liability. *
|
|
// * *
|
|
// * This code implementation is the result of the scientific and *
|
|
// * technical work of the GEANT4 collaboration. *
|
|
// * By using, copying, modifying or distributing the software (or *
|
|
// * any work based on the software) you agree to acknowledge its *
|
|
// * use in resulting scientific publications, and indicate your *
|
|
// * acceptance of all terms of the Geant4 Software license. *
|
|
// ********************************************************************
|
|
//
|
|
//
|
|
// Author: Mathieu Karamitros (kara (AT) cenbg . in2p3 . fr)
|
|
//
|
|
// WARNING : This class is released as a prototype.
|
|
// It might strongly evolve or even disapear in the next releases.
|
|
//
|
|
// History:
|
|
// -----------
|
|
// 10 Oct 2011 M.Karamitros created
|
|
//
|
|
// -------------------------------------------------------------------
|
|
|
|
#ifndef G4DiffControlledReactionRadius_
|
|
#define G4DiffControlledReactionRadius_
|
|
|
|
#include "AddClone_def.hh"
|
|
#include "G4VDNAReactionModel.hh"
|
|
#include <vector>
|
|
|
|
class G4DNAMolecularReactionData;
|
|
|
|
/**
|
|
* G4DNADiffusionControlledModel should be used
|
|
* for very fast reactions : the reactions between
|
|
* reactants occuring at encounter.
|
|
* When the time step is constrained this model
|
|
* uses brownian bridge : "Absorbing (Smoluchowski) boundary condition"
|
|
* Reference : On the simulation of diffusion processes close to boundaries,
|
|
* N. J. B. Green, Molecular Physics, 65: 6, 1399 — 1408(1988)
|
|
*/
|
|
|
|
class G4DNADiffusionControlledModel : public G4VDNAReactionModel
|
|
{
|
|
public :
|
|
G4DNADiffusionControlledModel();
|
|
virtual ~G4DNADiffusionControlledModel();
|
|
|
|
G4DNADiffusionControlledModel(const G4DNADiffusionControlledModel&);
|
|
|
|
G4IT_ADD_CLONE(G4VDNAReactionModel, G4DNADiffusionControlledModel)
|
|
|
|
virtual void Initialise(const G4Molecule*, const G4Track&) ;
|
|
virtual void InitialiseToPrint(const G4Molecule*) ;
|
|
virtual G4double GetReactionRadius(const G4Molecule*, const G4Molecule*);
|
|
virtual G4double GetReactionRadius(const G4int);
|
|
|
|
virtual G4bool FindReaction(const G4Track&,
|
|
const G4Track&,
|
|
const G4double /*reactionRadius*/,
|
|
G4double& /*separationDistance*/,
|
|
const G4bool /*alongStepInteraction*/) ;
|
|
|
|
private :
|
|
const std::vector<const G4DNAMolecularReactionData*>* fReactionData ;
|
|
G4DNADiffusionControlledModel& operator=(const G4DNADiffusionControlledModel&);
|
|
};
|
|
#endif
|