Gabriele Cosmo
130 lines
4.1 KiB
C++
130 lines
4.1 KiB
C++
//
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// ********************************************************************
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// * License and Disclaimer *
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// * *
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// * The Geant4 software is copyright of the Copyright Holders of *
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// * the Geant4 Collaboration. It is provided under the terms and *
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// * conditions of the Geant4 Software License, included in the file *
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// * LICENSE and available at http://cern.ch/geant4/license . These *
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// * include a list of copyright holders. *
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// * *
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// * Neither the authors of this software system, nor their employing *
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// * institutes,nor the agencies providing financial support for this *
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// * work make any representation or warranty, express or implied, *
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// * regarding this software system or assume any liability for its *
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// * use. Please see the license in the file LICENSE and URL above *
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// * for the full disclaimer and the limitation of liability. *
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// * *
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// * This code implementation is the result of the scientific and *
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// * technical work of the GEANT4 collaboration. *
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// * By using, copying, modifying or distributing the software (or *
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// * any work based on the software) you agree to acknowledge its *
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// * use in resulting scientific publications, and indicate your *
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// * acceptance of all terms of the Geant4 Software license. *
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// ********************************************************************
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//
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#ifndef DicomFileMgr__HH
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#define DicomFileMgr__HH
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#include <vector>
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#include <map>
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#include "globals.hh"
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#include "dcmtk/dcmdata/dcfilefo.h"
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class DicomVFile;
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class DicomFileCT;
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class DicomFileStructure;
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class DicomFilePlan;
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class DicomFilePET;
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class DcmDataset;
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//typedef std::multimap<OFString,DicomVFile*> msd;
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typedef std::map<G4double,DicomFileCT*> mdct;
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typedef std::map<G4double,DicomFilePET*> mdpet;
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enum VerbLevel {silentVerb = -1, errorVerb = 0, warningVerb = 1, infoVerb=2, debugVerb=3,
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testVerb=4};
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class DicomFileMgr
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{
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public:
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static DicomFileMgr* GetInstance();
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~DicomFileMgr(){};
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private:
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DicomFileMgr();
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public:
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std::vector<DicomFileStructure*> GetStructFiles() const {
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return theStructFiles;
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}
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void SetCompression( G4String fComp );
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void AddFile( G4String fComp );
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void AddMaterial( std::vector<G4String> data );
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void AddMaterialDensity( std::vector<G4String> data );
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void AddCT2Density( std::vector<G4String> data );
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void Convert( G4String fFileName );
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void CheckNColumns(std::vector<G4String> wl, size_t vsizeTh );
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void ProcessFiles();
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void CheckCTSlices();
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G4double Hounsfield2density(Uint32 Hval);
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size_t GetMaterialIndex( G4double Hval );
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size_t GetMaterialIndexByDensity( G4double density );
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void BuildCTMaterials();
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void MergeCTFiles();
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void CheckPETSlices();
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void BuildPETActivities();
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void MergePETFiles();
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void DumpToTextFile();
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void SetStructureNCheck( G4int nsc ){
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theStructureNCheck = nsc;
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}
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G4int GetStructureNCheck() const {
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return theStructureNCheck;
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}
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void SetStructureNMaxROI( G4int nsc ){
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theStructureNMaxROI = nsc;
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}
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G4int GetStructureNMaxROI() const {
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return theStructureNMaxROI;
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}
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G4int GetCompression() const {
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return fCompression;
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}
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G4String GetFileOutName() const {
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return theFileOutName;
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}
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void SetControlPointMetersets();
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G4bool IsMaterialsDensity() const {
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return bMaterialsDensity;
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}
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protected:
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G4int fCompression;
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private:
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static DicomFileMgr* theInstance;
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G4String theFileOutName;
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// msd theFiles;
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mdct theCTFiles;
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std::vector<DicomFileStructure*> theStructFiles;
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std::vector<DicomFilePlan*> thePlanFiles;
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mdpet thePETFiles;
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std::map<G4double,G4String> theMaterials;
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std::map<G4double,G4String> theMaterialsDensity;
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std::map<G4int,G4double> theCT2Density;
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DicomFileCT* theCTFileAll;
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DicomFilePET* thePETFileAll;
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G4int theStructureNCheck;
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G4int theStructureNMaxROI;
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public:
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static int verbose;
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G4bool bMaterialsDensity;
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};
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#endif
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