Gabriele Cosmo
190 lines
6.3 KiB
C++
190 lines
6.3 KiB
C++
//
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// ********************************************************************
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// * License and Disclaimer *
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// * *
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// * The Geant4 software is copyright of the Copyright Holders of *
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// * the Geant4 Collaboration. It is provided under the terms and *
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// * conditions of the Geant4 Software License, included in the file *
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// * LICENSE and available at http://cern.ch/geant4/license . These *
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// * include a list of copyright holders. *
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// * *
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// * Neither the authors of this software system, nor their employing *
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// * institutes,nor the agencies providing financial support for this *
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// * work make any representation or warranty, express or implied, *
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// * regarding this software system or assume any liability for its *
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// * use. Please see the license in the file LICENSE and URL above *
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// * for the full disclaimer and the limitation of liability. *
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// * *
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// * This code implementation is the result of the scientific and *
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// * technical work of the GEANT4 collaboration. *
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// * By using, copying, modifying or distributing the software (or *
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// * any work based on the software) you agree to acknowledge its *
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// * use in resulting scientific publications, and indicate your *
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// * acceptance of all terms of the Geant4 Software license. *
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// ********************************************************************
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//
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// The code was written by :
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// *Louis Archambault louis.archambault@phy.ulaval.ca,
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// *Luc Beaulieu beaulieu@phy.ulaval.ca
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// +Vincent Hubert-Tremblay at tigre.2@sympatico.ca
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//
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//
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// *Centre Hospitalier Universitaire de Quebec (CHUQ),
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// Hotel-Dieu de Quebec, departement de Radio-oncologie
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// 11 cote du palais. Quebec, QC, Canada, G1R 2J6
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// tel (418) 525-4444 #6720
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// fax (418) 691 5268
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//
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// + Université Laval, Québec (QC) Canada
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//*******************************************************//
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#ifndef DicomPatientParameterisation_h
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#define DicomPatientParameterisation_h 1
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#include "globals.hh"
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#include "G4VPVParameterisation.hh"
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#include <vector>
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class G4VPhysicalVolume;
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class G4LogicalVolume;
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class G4Box;
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class G4Material;
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class G4VisAttributes;
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class DicomConfiguration;
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class DicomPatientParameterisation : public G4VPVParameterisation
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{
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public:
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DicomPatientParameterisation(G4int NoVoxels,
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G4double maxDensity,
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G4double minDensity ,
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G4Material* lunginhale,
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G4Material* lungexhale,
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G4Material* adipose,
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G4Material* breast,
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G4Material* phantom,
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G4Material* muscle,
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G4Material* liver,
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G4Material* denseBone,
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G4Material* trabecularBone);
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virtual ~DicomPatientParameterisation();
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void ComputeTransformation (const G4int copyNo, G4VPhysicalVolume* physVol) const;
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void ComputeDimensions(G4Box&,
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const G4int,
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const G4VPhysicalVolume* ) const;
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void ComputeDimensions(G4Tubs &,
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const G4int,
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const G4VPhysicalVolume *) const {}
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void ComputeDimensions(G4Trd &,
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const G4int,
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const G4VPhysicalVolume *) const {}
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void ComputeDimensions(G4Trap &,
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const G4int,
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const G4VPhysicalVolume *) const {}
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void ComputeDimensions(G4Cons &,
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const G4int,
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const G4VPhysicalVolume *) const {}
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void ComputeDimensions(G4Sphere &,
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const G4int,
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const G4VPhysicalVolume *) const {}
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void ComputeDimensions(G4Orb &,
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const G4int,
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const G4VPhysicalVolume *) const {}
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void ComputeDimensions(G4Torus &,
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const G4int,
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const G4VPhysicalVolume *) const {}
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void ComputeDimensions(G4Para &,
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const G4int,
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const G4VPhysicalVolume *) const {}
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void ComputeDimensions(G4Polycone &,
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const G4int,
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const G4VPhysicalVolume *) const {}
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void ComputeDimensions(G4Polyhedra &,
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const G4int,
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const G4VPhysicalVolume *) const {}
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void ComputeDimensions(G4Hype &,
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const G4int,
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const G4VPhysicalVolume *) const {}
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G4Material* ComputeMaterial(const G4int copyNo,
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G4VPhysicalVolume* physVol,
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const G4VTouchable*);
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void GetDensity( G4double maxDensity, G4double minDensity );
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private:
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//materials ...
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G4Material* lungExhale;
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G4Material* lungInhale;
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G4Material* adiposeTissue;
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G4Material* breastTissue;
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G4Material* phantomTissue;
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G4Material* muscleTissue;
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G4Material* liverTissue;
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G4Material* denseBoneTissue;
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G4Material* trabecularBoneTissue;
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G4VisAttributes* attributeAir;
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G4VisAttributes* attributeLungINhale;
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G4VisAttributes* attributeLungEXhale;
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G4VisAttributes* attributeAdipose;
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G4VisAttributes* attributeBreast;
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G4VisAttributes* attributePhantom;
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G4VisAttributes* attributeMuscle;
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G4VisAttributes* attributeLiver;
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G4VisAttributes* attributeTrabecularBone;
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G4VisAttributes* attributeDenseBone;
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G4int max;
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short compression;
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FILE* readData;
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short columns,rows;
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G4double pixelSpacingX;
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G4double pixelSpacingY;
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G4double sliceThickness;
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G4double sliceLocation;
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std::vector<G4double> density;
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std::vector<G4double> patientPlacementX;
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std::vector<G4double> patientPlacementY;
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std::vector<G4double> patientPlacementZ;
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//G4LogicalVolume* LogicalVolumeParam;
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G4double middleLocationValue;
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private:
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void readColorChart();
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class ColorChart {
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public:
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G4double density;
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G4double color[3];
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G4double alpha;
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enum {CRED, CGREEN, CBLUE};
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};
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std::vector<ColorChart> colorChart;
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G4int numColorChart;
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G4double getChartColor(G4int, G4double density);
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};
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#endif
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