Gabriele Cosmo
111 lines
3.9 KiB
C++
111 lines
3.9 KiB
C++
//
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// ********************************************************************
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// * License and Disclaimer *
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// * *
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// * The Geant4 software is copyright of the Copyright Holders of *
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// * the Geant4 Collaboration. It is provided under the terms and *
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// * conditions of the Geant4 Software License, included in the file *
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// * LICENSE and available at http://cern.ch/geant4/license . These *
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// * include a list of copyright holders. *
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// * *
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// * Neither the authors of this software system, nor their employing *
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// * institutes,nor the agencies providing financial support for this *
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// * work make any representation or warranty, express or implied, *
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// * regarding this software system or assume any liability for its *
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// * use. Please see the license in the file LICENSE and URL above *
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// * for the full disclaimer and the limitation of liability. *
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// * *
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// * This code implementation is the result of the scientific and *
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// * technical work of the GEANT4 collaboration. *
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// * By using, copying, modifying or distributing the software (or *
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// * any work based on the software) you agree to acknowledge its *
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// * use in resulting scientific publications, and indicate your *
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// * acceptance of all terms of the Geant4 Software license. *
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// ********************************************************************
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//
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/*
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* G4DNAIRT.hh
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*
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* Created on: Jul 23, 2019
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* Author: W. G. Shin
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* J. Ramos-Mendez and B. Faddegon
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*/
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#ifndef G4DNAIRT_HH_
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#define G4DNAIRT_HH_
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#include "G4DNAMolecularReaction.hh"
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#include "G4DNAMolecularReactionTable.hh"
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#include "G4ITReaction.hh"
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#include "G4ITReactionTable.hh"
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#include "G4ITTrackHolder.hh"
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#include "G4Molecule.hh"
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#include "G4MoleculeTable.hh"
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#include "G4ParticleChange.hh"
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#include "G4ThreeVector.hh"
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#include "G4VDNAReactionModel.hh"
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#include "G4VITReactionProcess.hh"
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#include "globals.hh"
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#include "AddClone_def.hh"
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#include <map>
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#include <vector>
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class G4DNAMolecularReactionTable;
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class G4VDNAReactionModel;
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class G4ErrorFunction;
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class G4DNAIRT : public G4VITReactionProcess
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{
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public:
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G4DNAIRT();
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explicit G4DNAIRT(G4VDNAReactionModel*);
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~G4DNAIRT() override;
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G4DNAIRT(const G4DNAIRT& other) = delete;
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G4DNAIRT& operator=(const G4DNAIRT& other) = delete;
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G4bool TestReactibility(const G4Track&,
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const G4Track&,
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G4double ,
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G4bool ) override;
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std::vector<std::unique_ptr<G4ITReactionChange>> FindReaction(G4ITReactionSet*, const G4double, const G4double, const G4bool) override;
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std::unique_ptr<G4ITReactionChange> MakeReaction(const G4Track&, const G4Track&) override;
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void SetReactionModel(G4VDNAReactionModel*);
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void Initialize() override;
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void SpaceBinning();
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void IRTSampling();
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void Sampling(G4Track*);
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G4double GetIndependentReactionTime(const G4MolecularConfiguration*, const G4MolecularConfiguration*, G4double);
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G4int FindBin(G4int, G4double, G4double, G4double);
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G4double SamplePDC(G4double , G4double );
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protected:
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const G4DNAMolecularReactionTable*& fMolReactionTable;
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G4VDNAReactionModel* fpReactionModel;
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private:
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G4ITTrackHolder* fTrackHolder;
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G4ITReactionSet* fReactionSet;
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G4ErrorFunction* erfc;
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std::map<G4int,std::map<G4int,std::map<G4int,std::vector<G4Track*>>>> spaceBinned;
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G4double fRCutOff;
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G4double timeMin;
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G4double timeMax;
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G4double fXMin, fYMin, fZMin;
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G4double fXMax, fYMax, fZMax;
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G4int fNx, fNy, fNz;
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G4int xiniIndex, yiniIndex, ziniIndex;
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G4int xendIndex, yendIndex, zendIndex;
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};
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#endif /* G4DNAIRT_HH_ */
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