Gabriele Cosmo
132 lines
4.8 KiB
C++
132 lines
4.8 KiB
C++
//
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// ********************************************************************
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// * License and Disclaimer *
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// * *
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// * The Geant4 software is copyright of the Copyright Holders of *
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// * the Geant4 Collaboration. It is provided under the terms and *
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// * conditions of the Geant4 Software License, included in the file *
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// * LICENSE and available at http://cern.ch/geant4/license . These *
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// * include a list of copyright holders. *
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// * *
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// * Neither the authors of this software system, nor their employing *
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// * institutes,nor the agencies providing financial support for this *
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// * work make any representation or warranty, express or implied, *
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// * regarding this software system or assume any liability for its *
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// * use. Please see the license in the file LICENSE and URL above *
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// * for the full disclaimer and the limitation of liability. *
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// * *
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// * This code implementation is the result of the scientific and *
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// * technical work of the GEANT4 collaboration. *
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// * By using, copying, modifying or distributing the software (or *
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// * any work based on the software) you agree to acknowledge its *
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// * use in resulting scientific publications, and indicate your *
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// * acceptance of all terms of the Geant4 Software license. *
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// ********************************************************************
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//
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//
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#ifndef G4DNAEventScheduler_hh
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#define G4DNAEventScheduler_hh 1
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#include <G4VScheduler.hh>
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#include <vector>
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#include <map>
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#include <memory>
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#include "globals.hh"
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#include "G4ITModelHandler.hh"
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#include "G4ITStepStatus.hh"
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#include "G4ITTrackHolder.hh"
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#include "G4VStateDependent.hh"
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#include "G4ITReaction.hh"
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#include "G4DNAEventSet.hh"
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#include "G4DNAUpdateSystemModel.hh"
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#include "G4H2O2.hh"
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#include <CLHEP/Units/SystemOfUnits.h>
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class G4VITStepModel;
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class G4DNAGillespieDirectMethod;
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class G4UserMeshAction;
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class IEventScheduler
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{
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public:
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IEventScheduler() = default;
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virtual ~IEventScheduler() = default;
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};
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class G4DNAEventScheduler : public IEventScheduler
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{
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public:
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using MolType = const G4MolecularConfiguration*;
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using MapList = std::map<MolType, size_t>;
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using MapCounter = std::map<MolType, G4int>;
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G4DNAEventScheduler();
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~G4DNAEventScheduler() override;
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G4DNAEventScheduler(const G4DNAEventScheduler&) = delete;
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G4DNAEventScheduler& operator=(const G4DNAEventScheduler& right) = delete;
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void Initialize(const G4DNABoundingBox& boundingBox, G4int pixel);
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void InitializeInMesh();
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void Voxelizing(const G4DNABoundingBox& boundingBox);
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void ReVoxelizing(G4int);
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void SetEndTime(const G4double&);
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G4double GetStartTime() const;
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G4double GetEndTime() const;
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G4double GetTimeStep() const;
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G4double GetGlobalTime() const;
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void SetStartTime(G4double time);
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inline void SetVerbose(G4int verbose) { fVerbose = verbose; }
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inline G4int GetVerbose() const;
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void Stepping();
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void SetChangeMesh(G4bool change) { fSetChangeMesh = change; }
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void Reset();
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void ResetInMesh();
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void RunInMesh();
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void Run();
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void AddTimeToRecord(const G4double& time);
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void RecordTime();
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void ClearAndReChargeCounter();
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void PrintRecordTime();
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void Stop();
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void SetMaxNbSteps(G4int);
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std::map<G4double /*time*/, MapCounter> GetCounterMap() const;
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G4DNAMesh* GetMesh() const;
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G4int GetPixels() const;
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void SetUserMeshAction(std::unique_ptr<G4UserMeshAction>);
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static G4bool CheckingReactionRadius(G4double resolution);
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void ParticleBasedCounter();
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void ResetCounter();
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private:
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G4int fVerbose = 0;
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G4bool fInitialized = false;
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G4double fStartTime = 1 * CLHEP::picosecond;
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G4double fEndTime = 10000 * CLHEP::second;
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G4int fStepNumber = 0;
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G4int fMaxStep = INT_MAX;
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G4bool fRunning = true;
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G4double fTimeStep = DBL_MAX;
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G4double fGlobalTime = 1 * CLHEP::picosecond;
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G4double fJumpingNumber = 0;
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G4double fReactionNumber = 0;
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G4int fPixel = 0;
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G4bool fIsChangeMesh = false;
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G4bool fSetChangeMesh = true;
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G4int fStepNumberInMesh = 0;
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G4double fTransferTime = 0.;
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const G4double C = 20;
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const G4double D = G4H2O2::Definition()->GetDiffusionCoefficient(); // this is the biggest D
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std::unique_ptr<G4DNAMesh> fpMesh;
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std::unique_ptr<G4DNAGillespieDirectMethod> fpGillespieReaction;
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std::unique_ptr<G4DNAEventSet> fpEventSet;
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std::unique_ptr<G4DNAUpdateSystemModel> fpUpdateSystem;
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std::unique_ptr<G4UserMeshAction> fpUserMeshAction;
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// an aternative Counter
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std::map<G4double /*time*/, MapCounter> fCounterMap;
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std::set<G4double> fTimeToRecord;
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std::set<G4double>::iterator fLastRecoredTime;
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void ResetEventSet();
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void LastRegisterForCounter();
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};
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#endif
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