226 lines
6.6 KiB
Plaintext
226 lines
6.6 KiB
Plaintext
// Copyright (C) 2010, Guy Barrand. All rights reserved.
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// See the file tools.license for terms.
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#ifndef toolx_hdf5_pages
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#define toolx_hdf5_pages
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#include "T_tools"
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#include "tools"
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#include <tools/S_STRING>
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#include <ostream>
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namespace toolx {
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namespace hdf5 {
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TOOLS_GLOBAL_STRING(pages)
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TOOLS_GLOBAL_STRING(entries)
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TOOLS_GLOBAL_STRING(columns)
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TOOLS_GLOBAL_STRING(names)
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TOOLS_GLOBAL_STRING(forms)
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class pages {
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TOOLS_SCLASS(toolx::hdf5::pages)
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public:
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pages(std::ostream& a_out,
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hid_t a_group,const std::string& a_name,const std::string& a_form,
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bool a_write,unsigned int a_compress)
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:m_out(a_out),m_name(a_name),m_form(a_form)
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//,m_type(0),m_size(0)
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,m_group(-1),m_dataset(-1),m_write(a_write),m_compress(a_compress),m_entries(0),m_pos(0){
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if(m_write) {
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m_group = toolx_H5Gcreate(a_group,m_name.c_str(),0);
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if(m_group<0) {
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m_out << "pages::pages : can't create group for column " << m_name << "." << std::endl;
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m_group = -1;
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return;
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}
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if(!write_atb(m_group,"class",s_class())) {
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m_out << "pages::pages : write_atb(class) failed." << std::endl;
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::H5Gclose(m_group);
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m_group = -1;
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return;
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}
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int v = 1;
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if (!write_scalar_atb<int>(m_group,"version",v)) {
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m_out << "pages::pages : write_scalar_atb(version) failed." << std::endl;
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::H5Gclose(m_group);
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m_group = -1;
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return;
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}
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} else {
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m_group = toolx_H5Gopen(a_group,m_name.c_str());
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if(m_group<0) {
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m_out << "pages::pages : can't open group for column " << m_name << "." << std::endl;
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m_group = -1;
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return;
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}
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if(!read_scalar<tools::uint64>(m_group,s_entries(),m_entries)) {
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m_out << "pages::pages : read_scalar(entries) failed." << std::endl;
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::H5Gclose(m_group);
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m_group = -1;
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return;
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}
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}
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}
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virtual ~pages(){
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if(m_write) {
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if(!write_scalar<tools::uint64>(m_group,s_entries(),m_entries)) {
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m_out << "pages::~pages : write_scalar(entries) failed." << std::endl;
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}
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if(m_dataset>=0) ::H5Dclose(m_dataset);
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}
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::H5Gclose(m_group);
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}
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protected:
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pages(const pages& a_from):m_out(a_from.m_out){
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}
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pages& operator=(const pages&){return *this;}
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public:
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bool is_valid() const {return m_group<0?false:true;}
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const std::string& name() const {return m_name;}
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const std::string& form() const {return m_form;}
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tools::uint64 entries() const {return m_entries;}
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tools::uint64 pos() const {return m_pos;}
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void reset_pos() {m_pos = 0;}
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template <class TYPE>
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bool write_page(size_t a_size,const TYPE* a_array) {
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if(!m_pos) {
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if(!write_array<TYPE>(m_group,s_pages(),a_size,a_array,a_size?a_size:32,m_compress)) {
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m_out << "pages::write_page : write_array<TYPE>() failed. Pos " << m_pos << std::endl;
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return false;
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}
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m_dataset = toolx_H5Dopen(m_group,s_pages().c_str());
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if(m_dataset<0) {
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m_out << "pages::write_page : H5Dopen failed. Pos " << m_pos << std::endl;
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return false;
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}
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} else {
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if(!write_append_array_dataset<TYPE>(m_dataset,a_size,a_array)) {
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m_out << "pages::write_page : write_append_array_dataset<TYPE>() failed. Pos " << m_pos << std::endl;
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return false;
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}
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}
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m_pos += a_size;
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m_entries = m_pos;
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return true;
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}
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template <class TYPE>
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bool read_page(size_t a_size,TYPE* a_array) {
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//it is assumed that a_array can contain a_size*sizeof(TYPE) bytes.
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unsigned int _size = a_size;
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unsigned int n = 0;
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TYPE* array = 0;
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if(!read_sub_array<TYPE>(m_group,s_pages(),(unsigned int)m_pos,(unsigned int)_size,n,array)) {
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m_out << "pages::read_page : read_sub_array<TYPE>() failed." << std::endl;
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return false;
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}
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if(n!=_size) {
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m_out << "pages::read_page : size mismatch. Requested " << _size << ", got "<< n << "." << std::endl;
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delete [] array;
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return false;
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}
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{TYPE* rpos = (TYPE*)array;
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TYPE* wpos = (TYPE*)a_array;
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for(size_t i=0;i<n;i++,rpos++,wpos++) *wpos = *rpos;
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for(size_t i=n;i<_size;i++,rpos++,wpos++) *wpos = TYPE();}
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delete [] array;
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m_pos += n;
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return true;
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}
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template <class TYPE>
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bool write_vlen(size_t a_size,const TYPE* a_array) {
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if(!m_pos) {
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if(!hdf5::write_vlen<TYPE>(m_group,s_pages(),a_size,a_array,a_size?a_size:32,m_compress)) {
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m_out << "pages::write_vlen : write_vlen<TYPE>() failed. Pos " << m_pos << std::endl;
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return false;
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}
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m_dataset = toolx_H5Dopen(m_group,s_pages().c_str());
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if(m_dataset<0) {
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m_out << "pages::write_vlen : H5Dopen failed. Pos " << m_pos << std::endl;
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return false;
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}
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} else {
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if(!write_append_vlen_dataset<TYPE>(m_dataset,a_size,a_array)) {
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m_out << "pages::write_vlen : write_append_vlen_dataset<TYPE>() failed. Pos " << m_pos << std::endl;
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return false;
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}
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}
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m_pos++;
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m_entries++;
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return true;
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}
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template <class TYPE>
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bool read_vlen(size_t& a_size,TYPE*& a_array) {
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//it is assumed that a_array can contain a_size*sizeof(TYPE) bytes.
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unsigned int sz;
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if(!read_sub_vlen<TYPE>(m_group,s_pages(),(unsigned int)m_pos,sz,a_array)) {
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m_out << "pages::read_vlen : read_sub_vlen<TYPE>() failed." << std::endl;
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a_size = 0;
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a_array = 0;
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return false;
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}
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a_size = sz;
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m_pos++;
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m_entries++;
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return true;
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}
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bool write_string(const std::string& a_string) {
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if(!m_pos) {
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if(!hdf5::write_string_dataset(m_group,s_pages(),a_string,128,m_compress)) { //32=>enforce extendable.
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m_out << "pages::write_string : hdf5::write_string() failed. Pos " << m_pos << std::endl;
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return false;
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}
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m_dataset = toolx_H5Dopen(m_group,s_pages().c_str());
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if(m_dataset<0) {
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m_out << "pages::write_string : H5Dopen failed. Pos " << m_pos << std::endl;
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return false;
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}
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} else {
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if(!write_append_string_dataset(m_dataset,a_string)) {
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m_out << "pages::write_string : write_append_string_dataset() failed. Pos " << m_pos << std::endl;
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return false;
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}
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}
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m_pos++;
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m_entries++;
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return true;
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}
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bool read_string(std::string& a_string) {
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if(!read_sub_string(m_group,s_pages(),(unsigned int)m_pos,a_string)) {
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m_out << "pages::read_string : read_sub_string() failed." << std::endl;
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a_string.clear();
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return false;
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}
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m_pos++;
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m_entries++;
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return true;
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}
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protected:
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std::ostream& m_out;
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std::string m_name;
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std::string m_form;
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hid_t m_group;
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hid_t m_dataset;
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bool m_write;
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unsigned int m_compress; //if write.
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tools::uint64 m_entries;
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tools::uint64 m_pos;
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};
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}}
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#endif
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