Gabriele Cosmo
120 lines
4.4 KiB
C++
120 lines
4.4 KiB
C++
//
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// ********************************************************************
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// * License and Disclaimer *
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// * *
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// * The Geant4 software is copyright of the Copyright Holders of *
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// * the Geant4 Collaboration. It is provided under the terms and *
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// * conditions of the Geant4 Software License, included in the file *
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// * LICENSE and available at http://cern.ch/geant4/license . These *
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// * include a list of copyright holders. *
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// * *
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// * Neither the authors of this software system, nor their employing *
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// * institutes,nor the agencies providing financial support for this *
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// * work make any representation or warranty, express or implied, *
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// * regarding this software system or assume any liability for its *
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// * use. Please see the license in the file LICENSE and URL above *
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// * for the full disclaimer and the limitation of liability. *
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// * *
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// * This code implementation is the result of the scientific and *
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// * technical work of the GEANT4 collaboration. *
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// * By using, copying, modifying or distributing the software (or *
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// * any work based on the software) you agree to acknowledge its *
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// * use in resulting scientific publications, and indicate your *
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// * acceptance of all terms of the Geant4 Software license. *
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// ********************************************************************
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//
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/// \file DetectorConstruction.hh
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/// \brief Definition of the DetectorConstruction class
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// This example is provided by the Geant4-DNA collaboration
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// Any report or published results obtained using the Geant4-DNA software
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// shall cite the following Geant4-DNA collaboration publication:
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// Med. Phys. 37 (2010) 4692-4708
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// Delage et al. PDB4DNA: implementation of DNA geometry from the Protein Data
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// Bank (PDB) description for Geant4-DNA Monte-Carlo
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// simulations (submitted to Comput. Phys. Commun.)
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// The Geant4-DNA web site is available at http://geant4-dna.org
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//
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// --------------------------------------------------------------
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// Authors: E. Delage
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// november 2013
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// --------------------------------------------------------------
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//
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//
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//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
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#ifndef DetectorConstruction_h
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#define DetectorConstruction_h 1
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#include "G4Material.hh"
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#include "G4VUserDetectorConstruction.hh"
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#include "globals.hh"
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class DetectorMessenger;
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class G4LogicalVolume;
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class G4VPhysicalVolume;
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#include "PDBlib.hh"
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/// Detector construction class to define materials and geometry.
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class DetectorConstruction : public G4VUserDetectorConstruction
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{
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public:
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DetectorConstruction();
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virtual ~DetectorConstruction();
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virtual G4VPhysicalVolume* Construct();
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private:
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//! PDB filename
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G4String fPdbFileName;
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//! Option for the visualisation
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unsigned short int fChosenOption;
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//! Check if PDB file loaded
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unsigned short int fPdbFileStatus;
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PDBlib fPDBlib;
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Molecule* fpMoleculeList;
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Barycenter* fpBarycenterList;
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G4Material* fpDefaultMaterial;
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G4Material* fpWaterMaterial;
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void ConstructMaterials();
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void CheckMaterials();
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G4VPhysicalVolume* ConstructWorld();
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G4VPhysicalVolume* DefineVolumes(G4String filename, unsigned short int option);
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void AtomisticView(G4LogicalVolume*, Molecule*, double atomSizeFactor);
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void BarycenterView(G4LogicalVolume*, Barycenter*);
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void ResiduesView(G4LogicalVolume*, Barycenter*);
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void DrawBoundingVolume(G4LogicalVolume*, Molecule*);
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DetectorMessenger* fpMessenger; // messenger
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G4bool fCheckOverlaps; // option to activate checking of volumes overlaps
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public:
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// accessed by steppingAction.cc :
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Barycenter* GetBarycenterList();
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PDBlib GetPDBlib();
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Molecule* GetMoleculeList();
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// accessed by DetectorConstruction.cc :
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void LoadPDBfile(G4String fileName);
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void DrawAtoms_();
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void DrawNucleotides_();
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void DrawResidues_();
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void BuildBoundingVolume();
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void DrawAtomsWithBounding_();
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void DrawNucleotidesWithBounding_();
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void DrawResiduesWithBounding_();
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};
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//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
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#endif
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