Gabriele Cosmo
177 lines
7.0 KiB
C++
177 lines
7.0 KiB
C++
//
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// ********************************************************************
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// * License and Disclaimer *
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// * *
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// * The Geant4 software is copyright of the Copyright Holders of *
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// * the Geant4 Collaboration. It is provided under the terms and *
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// * conditions of the Geant4 Software License, included in the file *
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// * LICENSE and available at http://cern.ch/geant4/license . These *
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// * include a list of copyright holders. *
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// * *
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// * Neither the authors of this software system, nor their employing *
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// * institutes,nor the agencies providing financial support for this *
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// * work make any representation or warranty, express or implied, *
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// * regarding this software system or assume any liability for its *
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// * use. Please see the license in the file LICENSE and URL above *
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// * for the full disclaimer and the limitation of liability. *
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// * *
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// * This code implementation is the result of the scientific and *
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// * technical work of the GEANT4 collaboration. *
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// * By using, copying, modifying or distributing the software (or *
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// * any work based on the software) you agree to acknowledge its *
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// * use in resulting scientific publications, and indicate your *
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// * acceptance of all terms of the Geant4 Software license. *
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// ********************************************************************
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//
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/// \file DetectorConstruction.hh
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/// \brief Definition of the DetectorConstruction class
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// This example is provided by the Geant4-DNA collaboration
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// Any report or published results obtained using the Geant4-DNA software
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// shall cite the following Geant4-DNA collaboration publication:
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// Med. Phys. 37 (2010) 4692-4708
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// and papers
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// M. Batmunkh et al. J Radiat Res Appl Sci 8 (2015) 498-507
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// O. Belov et al. Physica Medica 32 (2016) 1510-1520
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// The Geant4-DNA web site is available at http://geant4-dna.org
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//
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// -------------------------------------------------------------------
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// November 2016
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// -------------------------------------------------------------------
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//
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#ifndef DetectorConstruction_h
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#define DetectorConstruction_h 1
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#include "G4Box.hh"
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#include "G4LogicalVolume.hh"
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#include "G4Material.hh"
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#include "G4NistManager.hh"
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#include "G4PVPlacement.hh"
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#include "G4Sphere.hh"
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#include "G4UnionSolid.hh"
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#include "G4UserLimits.hh"
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#include "G4VPhysicalVolume.hh"
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#include "G4VSolid.hh"
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#include "G4VUserDetectorConstruction.hh"
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#include "G4VisAttributes.hh"
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//
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#include "NeuronLoadDataFile.hh"
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#include "G4Ellipsoid.hh"
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#include "G4LogicalVolumeStore.hh"
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#include "G4Orb.hh"
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#include "G4PVParameterised.hh"
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#include "G4PhysicalVolumeStore.hh"
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#include "G4SolidStore.hh"
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#include "G4Tubs.hh"
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#include <vector>
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//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo....
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class G4Region;
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class DetectorConstruction : public G4VUserDetectorConstruction
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{
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public:
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DetectorConstruction();
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~DetectorConstruction() override;
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G4VPhysicalVolume* Construct() override;
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G4Region* GetTargetRegion() const { return fpRegion; }
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NeuronLoadDataFile* GetNeuronLoadParamz() const { return fNeuronLoadParamz; };
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const G4VPhysicalVolume* GetsomaPV(G4int i) const { return fsomaPV[i]; };
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const G4VPhysicalVolume* GetdendritePV(G4int i) const { return fdendritePV[i]; };
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const G4VPhysicalVolume* GetaxonPV(G4int i) const { return faxonPV[i]; };
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G4Material* GetTargetMaterial() const { return fpWaterMaterial; };
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G4int GetnbSomacomp() const { return fnbSomacomp; } //
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G4double GetMassSomacomp(G4int i) const { return fMassSomacomp[i]; } //
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G4double GetMassSomaTot() const { return fMassSomaTot; } //
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G4ThreeVector GetPosSomacomp(G4int i) const { return fPosSomacomp[i]; } //
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G4int GetnbDendritecomp() const { return fnbDendritecomp; } //
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G4double GetMassDendcomp(G4int i) const { return fMassDendcomp[i]; } //
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G4double GetMassDendTot() const { return fMassDendTot; } //
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G4ThreeVector GetPosDendcomp(G4int i) const { return fPosDendcomp[i]; } //
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G4double GetDistADendSoma(G4int i) const { return fDistADendSoma[i]; } //
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G4double GetDistBDendSoma(G4int i) const { return fDistBDendSoma[i]; } //
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G4int GetnbAxoncomp() const { return fnbAxoncomp; } //
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G4double GetMassAxoncomp(G4int i) const { return fMassAxoncomp[i]; } //
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G4double GetMassAxonTot() const { return fMassAxonTot; } //
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G4ThreeVector GetPosAxoncomp(G4int i) const { return fPosAxoncomp[i]; } //
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G4double GetDistAxonsoma(G4int i) const { return fDistAxonsoma[i]; } //
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G4double GetTotVolNeuron() const { return fTotVolNeuron; }
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G4double GetTotSurfNeuron() const { return fTotSurfNeuron; }
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G4double GetTotMassNeuron() const { return fTotMassNeuron; } //
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G4double GetTotVolSlice() const { return fTotVolSlice; }
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G4double GetTotSurfSlice() const { return fTotSurfSlice; }
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G4double GetTotMassSlice() const { return fTotMassSlice; } //
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G4double GetTotVolMedium() const { return fTotVolMedium; }
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G4double GetTotSurfMedium() const { return fTotSurfMedium; } //
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G4double GetTotMassMedium() const { return fTotMassMedium; } //
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private:
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void DefineMaterials();
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G4Material* fpWaterMaterial{nullptr};
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G4Material* fpWorldMaterial{nullptr};
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G4Region* fpRegion{nullptr};
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// For neuron constructions!
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NeuronLoadDataFile* fNeuronLoadParamz;
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G4bool fCheckOverlaps{false};
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std::vector<G4VSolid*> fsomaS;
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std::vector<G4VSolid*> fdendriteS;
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std::vector<G4VSolid*> faxonS;
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std::vector<G4LogicalVolume*> fsomaLV;
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std::vector<G4LogicalVolume*> fdendriteLV;
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std::vector<G4LogicalVolume*> faxonLV;
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std::vector<G4VPhysicalVolume*> fsomaPV;
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std::vector<G4VPhysicalVolume*> fdendritePV;
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std::vector<G4VPhysicalVolume*> faxonPV;
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G4VisAttributes* fSomaColour{nullptr};
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G4VisAttributes* fDendColour{nullptr};
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G4VisAttributes* fAxonColour{nullptr};
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G4VisAttributes* fSpineColour{nullptr};
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G4VisAttributes* fNeuronColour{nullptr};
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G4int fnbSomacomp{0};
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G4int fnbDendritecomp{0};
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G4int fnbAxoncomp{0};
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std::vector<G4ThreeVector> fPosSomacomp;
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std::vector<G4double> fMassSomacomp;
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std::vector<G4double> fDistADendSoma;
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std::vector<G4double> fDistBDendSoma;
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std::vector<G4double> fMassDendcomp;
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std::vector<G4ThreeVector> fPosDendcomp;
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std::vector<G4double> fDistAxonsoma;
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std::vector<G4double> fMassAxoncomp;
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std::vector<G4ThreeVector> fPosAxoncomp;
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G4double fMassSomaTot{0.0};
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G4double fMassDendTot{0.0};
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G4double fMassAxonTot{0.0};
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G4double fTotVolNeuron{0.0};
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G4double fTotSurfNeuron{0.0};
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G4double fTotMassNeuron{0.0};
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G4double fTotVolSlice{0.0};
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G4double fTotSurfSlice{0.0};
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G4double fTotMassSlice{0.0};
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G4double fTotVolMedium{0.0};
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G4double fTotSurfMedium{0.0};
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G4double fTotMassMedium{0.0};
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};
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#endif
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