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//
// ********************************************************************
// * License and Disclaimer *
// * *
// * The Geant4 software is copyright of the Copyright Holders of *
// * the Geant4 Collaboration. It is provided under the terms and *
// * conditions of the Geant4 Software License, included in the file *
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// * Neither the authors of this software system, nor their employing *
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// * work make any representation or warranty, express or implied, *
// * regarding this software system or assume any liability for its *
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// * *
// * This code implementation is the result of the scientific and *
// * technical work of the GEANT4 collaboration. *
// * By using, copying, modifying or distributing the software (or *
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//
/// \file DNAParser.hh
/// \brief Definition of the DNAParser class
// Authors: S. Meylan and C. Villagrasa (IRSN, France)
// Update: H. Tran (IRSN, France) :20/12/2018
//
#pragma once
#include "DNAVolumeType.hh"
#include "G4MoleculeGun.hh"
#include "G4String.hh"
#include "G4ThreeVector.hh"
#include <map>
#include <memory>
#include <unordered_map>
#include <vector>
class G4MoleculeGun;
class G4VPhysicalVolume;
class G4VSolid;
class G4Material;
class G4LogicalVolume;
class G4Orb;
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
class DNAParser
{
public:
using GeoData = std::unordered_map<const G4VPhysicalVolume*, DNAVolumeType>;
DNAParser();
~DNAParser();
G4LogicalVolume* CreateLogicVolume();
G4double GetVoxelSize();
std::unique_ptr<G4MoleculeGun> ReleaseMoleculeGun() { return std::move(fpGun); }
GeoData ReleaseGeoData() { return std::move(fGeometryMap); }
struct Molecule;
void ParseFile(const std::string&);
private:
G4double fSize;
std::string fGeoName;
std::map<G4String, G4double> fRadiusMap;
std::map<G4String, G4double> fWaterRadiusMap;
std::vector<Molecule> fMolecules;
G4Material* fpWater;
std::unique_ptr<G4MoleculeGun> fpGun;
std::map<std::string, DNAVolumeType> fEnumMap;
GeoData fGeometryMap;
void EnumParser();
G4VSolid* CreateCutSolid(G4Orb*, Molecule&, std::vector<Molecule>&, G4bool);
};