# Set Number of Threads
/run/numberOfThreads 1

# Set electron solvation process: "Meesungnoen2002", "Ritchie1994", "Terrisol1990"
/process/dna/e-SolvationSubType Ritchie1994

# Chemistry Scavenger Settings
/chem/scavenger/DMSO   5e-4
/chem/scavenger/Oxygen 0.27e-3

# Register Physics and Chemistries
/physics/SetPhysics   G4EmDNAPhysics_option4
/physics/SetChemistry G4EmDNAChemistry_ForPlasmids

# Plasmid DNA Settings (Befor Initialize)
/det/PlasmidFile  pUC19.xyz
/det/OffSetFile   PlasmidOffsets.txt
/det/UseDNAVolumes True
/det/NbOfPlasmids 1

/run/initialize

# World Size Settings
/det/setSize 1 um

# Spectrum source settings
/fpGun/SourceFile CaesiumSource.src

# Number of primaries per event 
# Correlates with Dose per Event.
/fpGun/PrimariesPerEvent 1

# Chemistry Scheduler Settings
/scheduler/endTime 100 microsecond
/scorer/species/nOfTimeBins 100
/scorer/species/addTimeToRecord 1 microsecond
/scorer/species/addTimeToRecord 10 microsecond

# GValues: Output Options
/scorer/species/OutputFile SpeciesInfo
/scorer/species/OutputFormat ASCII 

# SB: Output Options
/scorer/StrandBreak/OutputFile StrandBreakInfo
/scorer/StrandBreak/OutputFormat ASCII
/scorer/StrandBreak/BreakEnergy 17.5 eV

# Verbose Settings
/tracking/verbose 0
/scheduler/verbose 0

# Print Chemistry
/chem/reaction/print

/control/execute vis.in

# Run
/run/printProgress 1
/run/beamOn 0