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//
/// \file DNAGeometryMessenger.hh

#ifndef MOLECULAR_DNA_MESSENGER_HH
#define MOLECULAR_DNA_MESSENGER_HH

#include "G4UIcmdWith3VectorAndUnit.hh"
#include "G4UIcmdWithABool.hh"
#include "G4UIcmdWithADouble.hh"
#include "G4UIcmdWithADoubleAndUnit.hh"
#include "G4UIcmdWithAString.hh"
#include "G4UIcmdWithAnInteger.hh"
#include "G4UIcmdWithoutParameter.hh"
#include "G4UIdirectory.hh"
#include "G4UImessenger.hh"
#include "globals.hh"

#include <memory>

class DNAGeometry;

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......

class DNAGeometryMessenger : public G4UImessenger
{
  public:
    explicit DNAGeometryMessenger(DNAGeometry*);

    ~DNAGeometryMessenger() override = default;

    void SetNewValue(G4UIcommand*, G4String) override;

  protected:
  private:
    DNAGeometry* fpDNAGeometry;

    // Related to "voxel" placements
    std::unique_ptr<G4UIdirectory> fpDNADirectory;
    std::unique_ptr<G4UIcmdWithAString> fpNewPlacementVolumeFile;  // specifies molecule locations
    std::unique_ptr<G4UIcmdWithAString> fpVoxelPlacementsFile;  // specifies voxel locations
    std::unique_ptr<G4UIcmdWith3VectorAndUnit> fpVoxelSideLength;  // voxel size
    std::unique_ptr<G4UIcmdWith3VectorAndUnit>
      fpFractalScaling;  // multiplier for de-dimensionalised voxel locations
    std::unique_ptr<G4UIcmdWithABool>
      fpAnglesAsPi;  // take voxel placement angles as multiples of pi
    std::unique_ptr<G4UIcmdWithABool>
      fpCustomMoleculeSizes;  // turn off default molecule sizes and use custom
    std::unique_ptr<G4UIcmdWithAString> fpAddMoleculeSize;  // set a molecule size

    // Related to processing
    std::unique_ptr<G4UIcmdWithABool> fpCheckDNAOverlaps;
    std::unique_ptr<G4UIcmdWithAnInteger> fpVerbosity;
    std::unique_ptr<G4UIcmdWithAnInteger> fpSmartless;

    // damage-like
    std::unique_ptr<G4UIcmdWithADoubleAndUnit> fpIntRangeDirect;
    std::unique_ptr<G4UIcmdWithADoubleAndUnit> fpRadicalKillDistance;
    std::unique_ptr<G4UIcmdWithABool> fpUseHistoneScav;

    // vis
    std::unique_ptr<G4UIcmdWithABool> fpDrawCellVolumes;
    // testing
    std::unique_ptr<G4UIdirectory> fpTestDirectory;
    std::unique_ptr<G4UIcmdWithoutParameter> fpChromosomeTest;
    std::unique_ptr<G4UIcmdWithoutParameter> fpBasePairTest;
    std::unique_ptr<G4UIcmdWithoutParameter> fpUniqueIDTest;
};

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......

#endif  // MOLECULAR_DNA_MESSENGER_HH