Import Geant4 10.5.0 source tree
This commit is contained in:
Gabriele Cosmo
@@ -0,0 +1,66 @@
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//
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// ********************************************************************
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// * License and Disclaimer *
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||||
// * *
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||||
// * The Geant4 software is copyright of the Copyright Holders of *
|
||||
// * the Geant4 Collaboration. It is provided under the terms and *
|
||||
// * conditions of the Geant4 Software License, included in the file *
|
||||
// * LICENSE and available at http://cern.ch/geant4/license . These *
|
||||
// * include a list of copyright holders. *
|
||||
// * *
|
||||
// * Neither the authors of this software system, nor their employing *
|
||||
// * institutes,nor the agencies providing financial support for this *
|
||||
// * work make any representation or warranty, express or implied, *
|
||||
// * regarding this software system or assume any liability for its *
|
||||
// * use. Please see the license in the file LICENSE and URL above *
|
||||
// * for the full disclaimer and the limitation of liability. *
|
||||
// * *
|
||||
// * This code implementation is the result of the scientific and *
|
||||
// * technical work of the GEANT4 collaboration. *
|
||||
// * By using, copying, modifying or distributing the software (or *
|
||||
// * any work based on the software) you agree to acknowledge its *
|
||||
// * use in resulting scientific publications, and indicate your *
|
||||
// * acceptance of all terms of the Geant4 Software license. *
|
||||
// ********************************************************************
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//GEANT4 - Depth-of-Interaction enabled Positron emission tomography (PET) advanced example
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//Authors and contributors
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// Author list to be updated, with names of co-authors and contributors from National Institute of Radiological Sciences (NIRS)
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// Abdella M. Ahmed (1, 2), Andrew Chacon (1, 2), Harley Rutherford (1, 2),
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// Hideaki Tashima (3), Go Akamatsu (3), Akram Mohammadi (3), Taiga Yamaya (3)
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// Susanna Guatelli (2), and Mitra Safavi-Naeini (1, 2)
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// (1) Australian Nuclear Science and Technology Organisation, Australia
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// (2) University of Wollongong, Australia
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// (3) National Institute of Radiological Sciences, Japan
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#ifndef doiPETActionInitialization_h
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#define doiPETActionInitialization_h 1
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#include "G4VUserActionInitialization.hh"
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//
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class doiPETActionInitialization : public G4VUserActionInitialization
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{
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public:
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doiPETActionInitialization();
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virtual ~doiPETActionInitialization();
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virtual void BuildForMaster() const;
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virtual void Build() const;
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//virtual G4VSteppingVerbose* InitializeSteppingVerbose() const;
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private:
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// doiPETDetectorConstruction* fDetector;
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};
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//
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//////////////////////////////////////////////////////////////
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#endif
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@@ -0,0 +1,295 @@
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//
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// ********************************************************************
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||||
// * License and Disclaimer *
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||||
// * *
|
||||
// * The Geant4 software is copyright of the Copyright Holders of *
|
||||
// * the Geant4 Collaboration. It is provided under the terms and *
|
||||
// * conditions of the Geant4 Software License, included in the file *
|
||||
// * LICENSE and available at http://cern.ch/geant4/license . These *
|
||||
// * include a list of copyright holders. *
|
||||
// * *
|
||||
// * Neither the authors of this software system, nor their employing *
|
||||
// * institutes,nor the agencies providing financial support for this *
|
||||
// * work make any representation or warranty, express or implied, *
|
||||
// * regarding this software system or assume any liability for its *
|
||||
// * use. Please see the license in the file LICENSE and URL above *
|
||||
// * for the full disclaimer and the limitation of liability. *
|
||||
// * *
|
||||
// * This code implementation is the result of the scientific and *
|
||||
// * technical work of the GEANT4 collaboration. *
|
||||
// * By using, copying, modifying or distributing the software (or *
|
||||
// * any work based on the software) you agree to acknowledge its *
|
||||
// * use in resulting scientific publications, and indicate your *
|
||||
// * acceptance of all terms of the Geant4 Software license. *
|
||||
// ********************************************************************
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||||
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//GEANT4 - Depth-of-Interaction enabled Positron emission tomography (PET) advanced example
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//Authors and contributors
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// Author list to be updated, with names of co-authors and contributors from National Institute of Radiological Sciences (NIRS)
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// Abdella M. Ahmed (1, 2), Andrew Chacon (1, 2), Harley Rutherford (1, 2),
|
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// Hideaki Tashima (3), Go Akamatsu (3), Akram Mohammadi (3), Eiji Yoshida (3), Taiga Yamaya (3)
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// Susanna Guatelli (2), and Mitra Safavi-Naeini (1, 2)
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// (1) Australian Nuclear Science and Technology Organisation, Australia
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// (2) University of Wollongong, Australia
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// (3) National Institute of Radiological Sciences, Japan
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#ifndef doiPETAnalysis_h
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#define doiPETAnalysis_h 1
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#include "doiPETGlobalParameters.hh"
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#include "globals.hh"
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#include <vector>
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#include <time.h>
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#include <map>
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#include <set>
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#include "G4ThreeVector.hh"
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#include <iostream>
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#include <fstream>
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#include <sstream>
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#include <iterator>
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#include <vector>
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#include <algorithm>
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#ifdef USEROOT
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#pragma GCC diagnostic push
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#pragma GCC diagnostic ignored "-Wshadow"
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#include "TRandom3.h"
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#include "TFile.h"
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#include "TNtuple.h"
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#include "g4root.hh"
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#include "TROOT.h"
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#include "TFile.h"
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#include "TH1.h"
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#include "TH2.h"
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#include "TTree.h"
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#include "TLeaf.h"
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#include "TSystem.h"
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#pragma GCC diagnostic pop
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#endif
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class doiPETAnalysisMessenger;
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//class InteractionInformation;
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class doiPETAnalysis
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{
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private:
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doiPETAnalysis();
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public:
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~doiPETAnalysis();
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static doiPETAnalysis* GetInstance();
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void FindInteractingCrystal();
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void Open(G4String);
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void Close();
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void Delete();
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void ResetNumberOfHits();
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void Write(/*G4int, G4int, G4int, G4double*/);
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void WriteOutput();
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//void GetIntractionInfomation(InteractionInformation*);
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void GetParentParticleName(G4String);
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void GetSizeOfDetector (G4double, G4double, G4double);
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void GetScatterIndexInPhantom(G4double);
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void SetSourcePosition(G4ThreeVector);//
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void SetEventID(G4int);
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void BlurringParameters();
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void GetTimeOfAnnihilation(G4double);
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void PMTPosition();
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void AngerLogic(G4int, G4int, G4int, G4double, G4double, G4double, G4double);
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void ReadReflectorPattern();
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void SetActivity(G4double);
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void SetIsotopeHalfLife(G4double);
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void CrystalIDAfterAngerLogic(G4int, G4int, G4int);
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void TypeOfOutput(G4String);//Single or coincidence list-mode data
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void CalulateAcquisitionTime();
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//G4double QuantumEffifciency(G4double);
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G4double QuantumEffifciency(G4double, G4int, G4int);
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void ReadOut(G4int, G4int, G4double, G4double, G4ThreeVector, G4double);
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private:
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static doiPETAnalysis* instance;
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doiPETAnalysisMessenger* fAnalysisMessenger;
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//std::multimap< G4int, InteractionInformation* > mapBlockInteraction;
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std::set<G4int> setBlockInteraction;
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G4double upperThreshold, lowerThreshold;
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//G4ThreeVector sourcePosition;
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//
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G4int scatterIndex;
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G4String parentParticleName;//
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//
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G4int numberofInteractions;
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G4int countCoincidence;
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G4int numberOfBlocks_total;
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G4double sizeOfDetector_DOI,sizeOfDetector_axial,sizeOfDetector_tangential;
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//Virtual position of the PMT
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G4double signalPMT1, signalPMT2, signalPMT3, signalPMT4;
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G4double posPMT1x, posPMT2x, posPMT3x, posPMT4x;
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G4double posPMT1y, posPMT2y, posPMT3y, posPMT4y;
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G4double posPMT1z, posPMT2z, posPMT3z, posPMT4z;
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//
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G4double signalPMT1z, signalPMT2z, signalPMT3z, signalPMT4z;
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G4double signalPMT1y, signalPMT2y, signalPMT3y, signalPMT4y;
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//
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G4double signalZplus, signalZminus;
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G4double signalYplus, signalYminus;
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//
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G4double dist1z, dist2z, dist3z, dist4z, distz;
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G4double dist1y, dist2y, dist3y, dist4y, disty;
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G4double shiftCoeff;
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G4double PositionAngerZ, PositionAngerY;
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//reflector pattern
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std::vector<G4int> ireflectorLayer1_Tangential;
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std::vector<G4int> ireflectorLayer1_Axial;
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std::vector<G4int> ireflectorLayer2_Tangential;
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std::vector<G4int> ireflectorLayer2_Axial;
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std::vector<G4int> ireflectorLayer3_Tangential;
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std::vector<G4int> ireflectorLayer3_Axial;
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std::vector<G4int> ireflectorLayer4_Tangential;
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std::vector<G4int> ireflectorLayer4_Axial;
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std::vector<G4int> doi_table;
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//
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//The number of pixes for the 2D position histogram after Anger Logic calculation
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G4int numberOfPixel_axial;
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G4int numberOfPixel_tan;
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//source position
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G4double spositionX;
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G4double spositionY;
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G4double spositionZ;
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//interaction position with respect to the crystal axis
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G4ThreeVector interactionPos;
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G4double interactionTime;
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G4int crystalID;//contineous crystal ID in 3D
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G4int crystalID_2D;
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G4int prev_eventID;
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//Single output
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G4int eventID;
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G4int blockID;
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G4int crystalID_axial;
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G4int crystalID_tangential;
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G4int DOI_ID;
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G4double timeStamp;
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G4double totalEdep;
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//coincidence output
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G4int eventID0, eventID1;
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G4int blockID0, blockID1;
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G4int crystalID_axial0, crystalID_axial1;
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G4int crystalID_tangential0, crystalID_tangential1;
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G4int DOI_ID0, DOI_ID1;
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G4double timeStamp0, timeStamp1;
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G4double totalEdep0, totalEdep1;
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//choice for the user
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G4bool getSinglesData;
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G4bool getCoincidenceData;
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G4String outputData;
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G4int numberOfHit;
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std::vector<G4int> eventID_coin;
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std::vector<G4double> edep_coin;
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std::vector<G4int>blockID_coin;
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std::vector<G4int> cryID_axial_coin;
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std::vector<G4int> cryID_tan_coin;
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std::vector<G4int> cryDOI_coin;
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std::vector<G4double> time_coin;
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//Crystal IDs after Anger Logic calculation
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G4int crystalIDNew_DOI, crystalIDNew_tan, crystalIDNew_axial;
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//Crystal ID in the 2D position histogram along the axial and tangetial direction
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G4int crystalID_in2D_posHist_axial, crystalID_in2D_posHist_tan;
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//continous crystal ID after after Anger Logic.
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G4int crystalID_in2D_posHist;
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//Crystal blurring
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G4double crystalResolution;
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G4double crystalResolutionMin;//
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G4double crystalResolutionMax;//
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//G4bool variableResolution;
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G4bool fixedResolution;
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G4double energyResolution_fixed;
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std::vector<std::vector<G4double>> energyResolution_cryDependent;
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G4double crystalEnergyRef;//This 511 keV
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G4double crystalQuantumEfficiency;//
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G4double edep_AfterCrystalBlurring;
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G4double crystalCoeff;
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G4double sigma_energyResolution;
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G4double totalTime;
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G4double prev_totalTime;
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G4double timeInterval;
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G4double time_annihil;
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G4double time_tof;
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G4double block_DeadTime;
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G4double module_DeadTime;
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G4double *blockTime;
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G4double *moduleTime;
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//
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G4double activityNow;
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G4double InitialActivity;
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G4double halfLife;
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G4String simulationType;
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//
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//for output file to write results
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std::ofstream ofs;
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G4String asciiFileName;
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G4String rootFileName;
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#ifdef USEROOT
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TTree* tSingles;
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TTree* tCoincidence;
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//TH1F*hb;
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#endif
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//input file to read reflector pattern
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std::ifstream ifs;
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};
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#endif
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@@ -0,0 +1,77 @@
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// ********************************************************************
|
||||
// * License and Disclaimer *
|
||||
// * *
|
||||
// * The Geant4 software is copyright of the Copyright Holders of *
|
||||
// * the Geant4 Collaboration. It is provided under the terms and *
|
||||
// * conditions of the Geant4 Software License, included in the file *
|
||||
// * LICENSE and available at http://cern.ch/geant4/license . These *
|
||||
// * include a list of copyright holders. *
|
||||
// * *
|
||||
// * Neither the authors of this software system, nor their employing *
|
||||
// * institutes,nor the agencies providing financial support for this *
|
||||
// * work make any representation or warranty, express or implied, *
|
||||
// * regarding this software system or assume any liability for its *
|
||||
// * use. Please see the license in the file LICENSE and URL above *
|
||||
// * for the full disclaimer and the limitation of liability. *
|
||||
// * *
|
||||
// * This code implementation is the result of the scientific and *
|
||||
// * technical work of the GEANT4 collaboration. *
|
||||
// * By using, copying, modifying or distributing the software (or *
|
||||
// * any work based on the software) you agree to acknowledge its *
|
||||
// * use in resulting scientific publications, and indicate your *
|
||||
// * acceptance of all terms of the Geant4 Software license. *
|
||||
// ********************************************************************
|
||||
|
||||
//GEANT4 - Depth-of-Interaction enabled Positron emission tomography (PET) advanced example
|
||||
|
||||
//Contributors
|
||||
|
||||
// Abdella M. Ahmed (1, 2), Andrew Chacon (1, 2), Harley Rutherford (1, 2),
|
||||
// Hideaki Tashima (3), Go Akamatsu (3), Akram Mohammadi (3), Eiji Yoshida (3), Taiga Yamaya (3)
|
||||
// Susanna Guatelli (2), and Mitra Safavi-Naeini (1, 2)
|
||||
|
||||
// (1) Australian Nuclear Science and Technology Organisation, Australia
|
||||
// (2) University of Wollongong, Australia
|
||||
// (3) National Institute of Radiological Sciences, Japan
|
||||
|
||||
|
||||
#ifndef doiPETAnalysisMessenger_h
|
||||
#define doiPETAnalysisMessenger_h 1
|
||||
|
||||
#include "globals.hh"
|
||||
#include "G4UImessenger.hh"
|
||||
|
||||
class doiPETDetectorConstruction;
|
||||
class G4UIdirectory;
|
||||
class G4UIcmdWithAString;
|
||||
class G4UIcmdWithAnInteger;
|
||||
class G4UIcmdWithADouble;
|
||||
class G4UIcmdWithoutParameter;
|
||||
class G4UIcmdWithADoubleAndUnit;
|
||||
class G4UIcmdWith3VectorAndUnit;
|
||||
|
||||
|
||||
|
||||
class doiPETAnalysisMessenger : public G4UImessenger
|
||||
{
|
||||
public:
|
||||
|
||||
doiPETAnalysisMessenger(doiPETAnalysis* );
|
||||
~doiPETAnalysisMessenger();
|
||||
|
||||
void SetNewValue(G4UIcommand* ,G4String );
|
||||
|
||||
|
||||
private:
|
||||
|
||||
doiPETAnalysis* ptrAnalysis;
|
||||
G4UIdirectory *Dir;
|
||||
G4UIcmdWithADoubleAndUnit* changeActivityCmd;
|
||||
G4UIcmdWithADoubleAndUnit* changeHalfLifeCmd;
|
||||
//G4UIcmdWithAString* ChooseOutputTypeCmd;
|
||||
|
||||
};
|
||||
|
||||
#endif
|
||||
|
||||
|
||||
@@ -0,0 +1,300 @@
|
||||
// ********************************************************************
|
||||
// * License and Disclaimer *
|
||||
// * *
|
||||
// * The Geant4 software is copyright of the Copyright Holders of *
|
||||
// * the Geant4 Collaboration. It is provided under the terms and *
|
||||
// * conditions of the Geant4 Software License, included in the file *
|
||||
// * LICENSE and available at http://cern.ch/geant4/license . These *
|
||||
// * include a list of copyright holders. *
|
||||
// * *
|
||||
// * Neither the authors of this software system, nor their employing *
|
||||
// * institutes,nor the agencies providing financial support for this *
|
||||
// * work make any representation or warranty, express or implied, *
|
||||
// * regarding this software system or assume any liability for its *
|
||||
// * use. Please see the license in the file LICENSE and URL above *
|
||||
// * for the full disclaimer and the limitation of liability. *
|
||||
// * *
|
||||
// * This code implementation is the result of the scientific and *
|
||||
// * technical work of the GEANT4 collaboration. *
|
||||
// * By using, copying, modifying or distributing the software (or *
|
||||
// * any work based on the software) you agree to acknowledge its *
|
||||
// * use in resulting scientific publications, and indicate your *
|
||||
// * acceptance of all terms of the Geant4 Software license. *
|
||||
// ********************************************************************
|
||||
|
||||
//GEANT4 - Depth-of-Interaction enabled Positron emission tomography (PET) advanced example
|
||||
|
||||
//Contributors
|
||||
|
||||
// Abdella M. Ahmed (1, 2), Andrew Chacon (1, 2), Harley Rutherford (1, 2),
|
||||
// Hideaki Tashima (3), Go Akamatsu (3), Akram Mohammadi (3), Eiji Yoshida (3), Taiga Yamaya (3)
|
||||
// Susanna Guatelli (2), and Mitra Safavi-Naeini (1, 2)
|
||||
|
||||
// (1) Australian Nuclear Science and Technology Organisation, Australia
|
||||
// (2) University of Wollongong, Australia
|
||||
// (3) National Institute of Radiological Sciences, Japan
|
||||
|
||||
|
||||
|
||||
#ifndef doiPETDetectorConstruction_h
|
||||
#define doiPETDetectorConstruction_h 1
|
||||
|
||||
#include "G4VUserDetectorConstruction.hh"
|
||||
#include "globals.hh"
|
||||
#include "G4UnitsTable.hh"
|
||||
#include "G4Element.hh"
|
||||
#include "doiPETGlobalParameters.hh"
|
||||
|
||||
class G4Material;
|
||||
class G4VPhysicalVolume;
|
||||
class G4LogicalVolume;
|
||||
//
|
||||
class doiPETAnalysis;
|
||||
class doiPETDetectorConstructionMessenger;
|
||||
|
||||
/// Detector construction class to define materials and geometry.
|
||||
///
|
||||
/// Crystals are positioned in Ring, with an appropriate rotation matrix.
|
||||
/// Several copies of Ring are placed in the full detector.
|
||||
|
||||
class doiPETDetectorConstruction : public G4VUserDetectorConstruction
|
||||
{
|
||||
public:
|
||||
doiPETDetectorConstruction();
|
||||
virtual ~doiPETDetectorConstruction();
|
||||
|
||||
public:
|
||||
virtual G4VPhysicalVolume* Construct();
|
||||
|
||||
void ConstructPhantom(G4LogicalVolume*);
|
||||
void ChangePhantom(G4String choice);
|
||||
void SetPhantomPosition(G4ThreeVector);
|
||||
void SetPhantomRadius(G4double);
|
||||
void SetPhantomLength(G4double);
|
||||
|
||||
|
||||
private:
|
||||
void DefineMaterials();
|
||||
doiPETDetectorConstructionMessenger* fDetectorMessenger;
|
||||
doiPETAnalysis* pAnalysis;
|
||||
|
||||
G4LogicalVolume* phantom_logicalV;
|
||||
G4VPhysicalVolume* phantom_physicalV;
|
||||
G4LogicalVolume* gelatin_logicalV;
|
||||
G4VPhysicalVolume* gelatin_physicalV;
|
||||
|
||||
//wolrd
|
||||
G4LogicalVolume* world_logicalV;
|
||||
G4VPhysicalVolume* world_physicalV;
|
||||
|
||||
//detector block
|
||||
G4LogicalVolume* blockDetector_logicalV;
|
||||
G4VPhysicalVolume* blockDetector_physicalV;
|
||||
|
||||
//air volume to fill the detector block
|
||||
G4LogicalVolume* airBox_logicalV;
|
||||
G4VPhysicalVolume* airBox_physicalV;
|
||||
|
||||
//crystals
|
||||
G4LogicalVolume* crystal_logicalV;
|
||||
G4VPhysicalVolume* crystal_physicalV;
|
||||
|
||||
|
||||
//water
|
||||
G4LogicalVolume* water_logicalV;
|
||||
G4VPhysicalVolume* water_physicalV;
|
||||
|
||||
//lung
|
||||
G4LogicalVolume* lung_logicalV;
|
||||
G4VPhysicalVolume* lung_physicalV;
|
||||
|
||||
//test line phantom
|
||||
G4LogicalVolume* test_logicalV;
|
||||
G4VPhysicalVolume* test_physicalV;
|
||||
|
||||
G4LogicalVolume* lung_logicalV_PMMA;
|
||||
G4VPhysicalVolume* lung_physicalVPMMA;
|
||||
|
||||
//cold regions
|
||||
G4LogicalVolume* coldRegion_logicalV;
|
||||
G4VPhysicalVolume* coldRegion_physicalV;
|
||||
|
||||
//
|
||||
//Surrounding PMMA for hot sphere
|
||||
G4LogicalVolume* hotSpherePMMA_logicalV;
|
||||
G4VPhysicalVolume* hotSpherePMMA_physicalV;
|
||||
|
||||
//hot water phantom (activity is distributed)
|
||||
G4LogicalVolume* hotSphereWater_logicalV;
|
||||
G4VPhysicalVolume* hotSphereWater_physicalV;
|
||||
|
||||
//surrounding PMMA cold sphere
|
||||
G4LogicalVolume* coldSpherePMMA_logicalV;
|
||||
G4VPhysicalVolume* coldSpherePMMA_physicalV;
|
||||
|
||||
//cold Water phantom in the cold PMMA sphere
|
||||
G4LogicalVolume* coldSphereWater_logicalV;
|
||||
G4VPhysicalVolume* coldSphereWater_physicalV;
|
||||
|
||||
//fillable polyethylene phantom for sensitivity
|
||||
G4LogicalVolume* phantomPE_logicalV;
|
||||
G4VPhysicalVolume* phantomPE_physicalV;
|
||||
|
||||
//Image quality phantom for small animal NEMA NU-4
|
||||
G4LogicalVolume* waterPhantom_logicalV;
|
||||
G4VPhysicalVolume* WaterPhantom_physicalV;
|
||||
|
||||
G4LogicalVolume* rod_phantom_logicalV;
|
||||
G4VPhysicalVolume* rod_phantom_physicalV;
|
||||
|
||||
G4LogicalVolume* chamberPMMA_logicalV;
|
||||
G4VPhysicalVolume* chamberPMMA_physicalV;
|
||||
|
||||
//
|
||||
G4LogicalVolume* chamberWater_logicalV;
|
||||
G4VPhysicalVolume* chamberWater_physicalV;
|
||||
|
||||
//
|
||||
G4LogicalVolume* chamberAir_logicalV;
|
||||
G4VPhysicalVolume* chamberAir_physicalV;
|
||||
|
||||
|
||||
//Dimension of the sphere
|
||||
G4double spherePositionX, spherePositionY, spherePositionZ;
|
||||
G4double sphereDiameter;
|
||||
G4double distanceFromCenter;
|
||||
G4int numberOfSpheres;
|
||||
G4double sphereWallThickness;
|
||||
G4double zOffsetSpherePhantom;
|
||||
|
||||
G4String PhantomType;
|
||||
|
||||
//materials
|
||||
G4Material* air;
|
||||
G4Material* pmma;
|
||||
G4Material* water;
|
||||
G4Material* polyethylene;
|
||||
G4Material* polyethylene_NEMA;
|
||||
G4Material* inflatedLung;
|
||||
G4Material* polystyrene;
|
||||
G4Material* Aluminum;
|
||||
|
||||
//elements for GSO
|
||||
G4Element* O;
|
||||
G4Element* Si;
|
||||
G4Element* Gd;
|
||||
G4Material* GSO;
|
||||
|
||||
G4Material* crystalMaterial;
|
||||
//G4Material* phantomMaterial;
|
||||
|
||||
G4bool fCheckOverlaps;
|
||||
G4bool isotopes;
|
||||
|
||||
|
||||
//size of world
|
||||
G4double worldSizeX;
|
||||
G4double worldSizeY;
|
||||
G4double worldSizeZ;
|
||||
|
||||
|
||||
//The following is moved to doiPETGlobalParameters.hh
|
||||
//G4int numberOfCrystal_DOI;
|
||||
//G4int numberOfCrystal_tangential;
|
||||
//G4int numberOfCrystal_axial;
|
||||
|
||||
////
|
||||
//G4double sizeOfCrystal_DOI;
|
||||
//G4double sizeOfCrystal_tangential;
|
||||
//G4double sizeOfCrystal_axial;
|
||||
|
||||
////
|
||||
//G4double crystalGap_DOI;
|
||||
//G4double crystalGap_tangential;
|
||||
//G4double crystalGap_axial;
|
||||
|
||||
G4double sizeOfAirBox_DOI;
|
||||
G4double sizeOfAirBox_axial;
|
||||
G4double sizeOfAirBox_tangential;
|
||||
|
||||
|
||||
G4double sizeOfBlockDetector_DOI;
|
||||
G4double sizeOfBlockDetector_axial;
|
||||
G4double sizeOfBlockDetector_tangential;
|
||||
|
||||
//G4double AluminumCoverThickness;
|
||||
|
||||
|
||||
//G4int numberOfPETDetector;
|
||||
//G4int numberOfRings;
|
||||
|
||||
|
||||
//G4double scannerRadius;
|
||||
G4double thetaDetector; //The azimuthal angle for arranging the detector in the PET ring
|
||||
//G4double ringGap;
|
||||
G4int blockIndex;
|
||||
G4int AlCase_Index;
|
||||
G4int crystalIndex;
|
||||
|
||||
//detector position
|
||||
G4double detectorPositionX;
|
||||
G4double detectorPositionY;
|
||||
G4double detectorPositionZ;
|
||||
|
||||
//crystal position
|
||||
G4double crystalPositionX;
|
||||
G4double crystalPositionY;
|
||||
G4double crystalPositionZ;
|
||||
|
||||
|
||||
|
||||
G4ThreeVector phantomPosition;
|
||||
|
||||
//
|
||||
G4double phantomRadius;
|
||||
G4double phantomLength;
|
||||
|
||||
//Phantom dimension for rectangular box (placed for therapy study)
|
||||
G4double phantomSizeX, phantomSizeY, phantomSizeZ;
|
||||
|
||||
//the following is to make the body phantom
|
||||
G4double yOffsetBodyPhantom;
|
||||
G4double zOffsetBodyPhantom;
|
||||
G4double lengthOfBodyPhantom; //Interior length ( = 180m mm) + wallthickness (= 3mm)
|
||||
G4double radiusOfBodyPhantom;
|
||||
G4double wallThicknessOfBodyPhantom;
|
||||
G4double radiusOfLungPhantom;
|
||||
|
||||
//Test phantom defnition. The phantom has the same as that that of NECR phantom except
|
||||
G4double hieghtOfTestPhantom;
|
||||
G4double diameterOfTestPhantom;
|
||||
|
||||
//To the cylindrical phantom to make the body phantom
|
||||
G4double radiusOfSmallcyl;
|
||||
G4double boxWidth;
|
||||
G4double boxHeight;
|
||||
|
||||
|
||||
//Image quality phantom for small animals
|
||||
G4double waterPhantomRadius;
|
||||
G4double waterPhantomLength;
|
||||
|
||||
G4double rodPhantomLength;
|
||||
G4double rodDiameter;
|
||||
G4int numberOfRods;
|
||||
|
||||
//Declare position for the rod phantoms
|
||||
G4double rodPositionX, rodPositionY, rodPositionZ;
|
||||
|
||||
//Declare position for cold region chanmbers
|
||||
G4double chamberPositionX, chamberPositionY, chamberPositionZ;
|
||||
G4double chamberPhantomLength;
|
||||
G4double chamberDiameter;
|
||||
G4double wallThicknessOfChamber;
|
||||
|
||||
|
||||
};
|
||||
|
||||
/////////////////////////////////////////////////////////////////////////////////////////
|
||||
|
||||
#endif
|
||||
@@ -0,0 +1,82 @@
|
||||
//
|
||||
// ********************************************************************
|
||||
// * License and Disclaimer *
|
||||
// * *
|
||||
// * The Geant4 software is copyright of the Copyright Holders of *
|
||||
// * the Geant4 Collaboration. It is provided under the terms and *
|
||||
// * conditions of the Geant4 Software License, included in the file *
|
||||
// * LICENSE and available at http://cern.ch/geant4/license . These *
|
||||
// * include a list of copyright holders. *
|
||||
// * *
|
||||
// * Neither the authors of this software system, nor their employing *
|
||||
// * institutes,nor the agencies providing financial support for this *
|
||||
// * work make any representation or warranty, express or implied, *
|
||||
// * regarding this software system or assume any liability for its *
|
||||
// * use. Please see the license in the file LICENSE and URL above *
|
||||
// * for the full disclaimer and the limitation of liability. *
|
||||
// * *
|
||||
// * This code implementation is the result of the scientific and *
|
||||
// * technical work of the GEANT4 collaboration. *
|
||||
// * By using, copying, modifying or distributing the software (or *
|
||||
// * any work based on the software) you agree to acknowledge its *
|
||||
// * use in resulting scientific publications, and indicate your *
|
||||
// * acceptance of all terms of the Geant4 Software license. *
|
||||
// ********************************************************************
|
||||
|
||||
//GEANT4 - Depth-of-Interaction enabled Positron emission tomography (PET) advanced example
|
||||
|
||||
//Authors and contributors
|
||||
|
||||
// Author list to be updated, with names of co-authors and contributors from National Institute of Radiological Sciences (NIRS)
|
||||
|
||||
// Abdella M. Ahmed (1, 2), Andrew Chacon (1, 2), Harley Rutherford (1, 2),
|
||||
// Hideaki Tashima (3), Go Akamatsu (3), Akram Mohammadi (3), Eiji Yoshida (3), Taiga Yamaya (3)
|
||||
// Susanna Guatelli (2), and Mitra Safavi-Naeini (1, 2)
|
||||
|
||||
// (1) Australian Nuclear Science and Technology Organisation, Australia
|
||||
// (2) University of Wollongong, Australia
|
||||
// (3) National Institute of Radiological Sciences, Japan
|
||||
|
||||
|
||||
|
||||
#ifndef doiPETDetectorConstructionMessenger_h
|
||||
#define doiPETDetectorConstructionMessenger_h 1
|
||||
|
||||
#include "globals.hh"
|
||||
#include "G4UImessenger.hh"
|
||||
|
||||
class doiPETDetectorConstruction;
|
||||
class G4UIdirectory;
|
||||
class G4UIcmdWithAString;
|
||||
class G4UIcmdWithAnInteger;
|
||||
class G4UIcmdWithADouble;
|
||||
class G4UIcmdWithoutParameter;
|
||||
class G4UIcmdWithADoubleAndUnit;
|
||||
class G4UIcmdWith3VectorAndUnit;
|
||||
|
||||
|
||||
|
||||
class doiPETDetectorConstructionMessenger : public G4UImessenger
|
||||
{
|
||||
public:
|
||||
|
||||
doiPETDetectorConstructionMessenger(doiPETDetectorConstruction* );
|
||||
~doiPETDetectorConstructionMessenger();
|
||||
|
||||
void SetNewValue(G4UIcommand* ,G4String );
|
||||
|
||||
private:
|
||||
|
||||
doiPETDetectorConstruction* Detector;
|
||||
|
||||
G4UIdirectory *Dir;
|
||||
G4UIcmdWithAString* ChoosePhantomCmd;
|
||||
|
||||
G4UIcmdWith3VectorAndUnit *changeThePhantomPositionCmd;
|
||||
G4UIcmdWithADoubleAndUnit* changePhantomRadiusCmd;
|
||||
G4UIcmdWithADoubleAndUnit* changePhantomLengthCmd;
|
||||
};
|
||||
|
||||
#endif
|
||||
|
||||
|
||||
@@ -0,0 +1,68 @@
|
||||
//
|
||||
// ********************************************************************
|
||||
// * License and Disclaimer *
|
||||
// * *
|
||||
// * The Geant4 software is copyright of the Copyright Holders of *
|
||||
// * the Geant4 Collaboration. It is provided under the terms and *
|
||||
// * conditions of the Geant4 Software License, included in the file *
|
||||
// * LICENSE and available at http://cern.ch/geant4/license . These *
|
||||
// * include a list of copyright holders. *
|
||||
// * *
|
||||
// * Neither the authors of this software system, nor their employing *
|
||||
// * institutes,nor the agencies providing financial support for this *
|
||||
// * work make any representation or warranty, express or implied, *
|
||||
// * regarding this software system or assume any liability for its *
|
||||
// * use. Please see the license in the file LICENSE and URL above *
|
||||
// * for the full disclaimer and the limitation of liability. *
|
||||
// * *
|
||||
// * This code implementation is the result of the scientific and *
|
||||
// * technical work of the GEANT4 collaboration. *
|
||||
// * By using, copying, modifying or distributing the software (or *
|
||||
// * any work based on the software) you agree to acknowledge its *
|
||||
// * use in resulting scientific publications, and indicate your *
|
||||
// * acceptance of all terms of the Geant4 Software license. *
|
||||
// ********************************************************************
|
||||
|
||||
//GEANT4 - Depth-of-Interaction enabled Positron emission tomography (PET) advanced example
|
||||
|
||||
//Authors and contributors
|
||||
|
||||
// Author list to be updated, with names of co-authors and contributors from National Institute of Radiological Sciences (NIRS)
|
||||
|
||||
// Abdella M. Ahmed (1, 2), Andrew Chacon (1, 2), Harley Rutherford (1, 2),
|
||||
// Hideaki Tashima (3), Go Akamatsu (3), Akram Mohammadi (3), Eiji Yoshida (3), Taiga Yamaya (3)
|
||||
// Susanna Guatelli (2), and Mitra Safavi-Naeini (1, 2)
|
||||
|
||||
// (1) Australian Nuclear Science and Technology Organisation, Australia
|
||||
// (2) University of Wollongong, Australia
|
||||
// (3) National Institute of Radiological Sciences, Japan
|
||||
|
||||
|
||||
|
||||
#ifndef doiPETEventAction_h
|
||||
#define doiPETEventAction_h 1
|
||||
|
||||
#include "G4UserEventAction.hh"
|
||||
#include "globals.hh"
|
||||
#include <map>
|
||||
#include <set>
|
||||
|
||||
/// Event action class
|
||||
class doiPETEventAction : public G4UserEventAction
|
||||
{
|
||||
public:
|
||||
doiPETEventAction();
|
||||
virtual ~doiPETEventAction();
|
||||
|
||||
virtual void BeginOfEventAction(const G4Event*);
|
||||
virtual void EndOfEventAction(const G4Event*);
|
||||
|
||||
private:
|
||||
G4int eventID;
|
||||
G4int printModulo;
|
||||
};
|
||||
|
||||
#endif
|
||||
|
||||
|
||||
|
||||
@@ -0,0 +1,72 @@
|
||||
//
|
||||
// ********************************************************************
|
||||
// * License and Disclaimer *
|
||||
// * *
|
||||
// * The Geant4 software is copyright of the Copyright Holders of *
|
||||
// * the Geant4 Collaboration. It is provided under the terms and *
|
||||
// * conditions of the Geant4 Software License, included in the file *
|
||||
// * LICENSE and available at http://cern.ch/geant4/license . These *
|
||||
// * include a list of copyright holders. *
|
||||
// * *
|
||||
// * Neither the authors of this software system, nor their employing *
|
||||
// * institutes,nor the agencies providing financial support for this *
|
||||
// * work make any representation or warranty, express or implied, *
|
||||
// * regarding this software system or assume any liability for its *
|
||||
// * use. Please see the license in the file LICENSE and URL above *
|
||||
// * for the full disclaimer and the limitation of liability. *
|
||||
// * *
|
||||
// * This code implementation is the result of the scientific and *
|
||||
// * technical work of the GEANT4 collaboration. *
|
||||
// * By using, copying, modifying or distributing the software (or *
|
||||
// * any work based on the software) you agree to acknowledge its *
|
||||
// * use in resulting scientific publications, and indicate your *
|
||||
// * acceptance of all terms of the Geant4 Software license. *
|
||||
// ********************************************************************
|
||||
|
||||
//GEANT4 - Depth-of-Interaction enabled Positron emission tomography (PET) advanced example
|
||||
|
||||
//Authors and contributors
|
||||
|
||||
// Author list to be updated, with names of co-authors and contributors from National Institute of Radiological Sciences (NIRS)
|
||||
|
||||
// Abdella M. Ahmed (1, 2), Andrew Chacon (1, 2), Harley Rutherford (1, 2),
|
||||
// Hideaki Tashima (3), Go Akamatsu (3), Akram Mohammadi (3), Eiji Yoshida (3), Taiga Yamaya (3)
|
||||
// Susanna Guatelli (2), and Mitra Safavi-Naeini (1, 2)
|
||||
|
||||
// (1) Australian Nuclear Science and Technology Organisation, Australia
|
||||
// (2) University of Wollongong, Australia
|
||||
// (3) National Institute of Radiological Sciences, Japan
|
||||
|
||||
//The header file consists of specification if the scanner geometry
|
||||
|
||||
//Number of crystals (scintillators) in the DOI (x), tangential (y) and axial (z) direction.
|
||||
#define numberOfCrystal_DOI 4
|
||||
#define numberOfCrystal_tangential 16
|
||||
#define numberOfCrystal_axial 16
|
||||
|
||||
//size of the crystals in the DOI (x), tangential (y) and axial (z) direction.
|
||||
#define sizeOfCrystal_DOI 7.5*mm
|
||||
#define sizeOfCrystal_tangential 2.8*mm
|
||||
#define sizeOfCrystal_axial 2.8*mm
|
||||
|
||||
//Inter crystal gap between crystals.
|
||||
#define crystalGap_DOI 0.0*mm
|
||||
#define crystalGap_tangential 0.08*mm
|
||||
#define crystalGap_axial 0.08*mm
|
||||
|
||||
|
||||
|
||||
//Define Aluminum thickness cover for the detector
|
||||
#define AluminumCoverThickness 0.3 * mm
|
||||
|
||||
//Number of PET detectors per ring
|
||||
#define numberOfDetector_perRing 40
|
||||
|
||||
//Number of rings in the PET system
|
||||
#define numberOfRings 4
|
||||
|
||||
//Radius of the PET system. Note that the radius is defined between to opposing sensitive detectors (It does not include detector block cover).
|
||||
#define scannerRadius 330 * mm
|
||||
|
||||
//Gap between two adjacent rings. There are three gaps in four ring PET system
|
||||
#define ringGap 10.4 * mm
|
||||
@@ -0,0 +1,72 @@
|
||||
//
|
||||
// ********************************************************************
|
||||
// * License and Disclaimer *
|
||||
// * *
|
||||
// * The Geant4 software is copyright of the Copyright Holders of *
|
||||
// * the Geant4 Collaboration. It is provided under the terms and *
|
||||
// * conditions of the Geant4 Software License, included in the file *
|
||||
// * LICENSE and available at http://cern.ch/geant4/license . These *
|
||||
// * include a list of copyright holders. *
|
||||
// * *
|
||||
// * Neither the authors of this software system, nor their employing *
|
||||
// * institutes,nor the agencies providing financial support for this *
|
||||
// * work make any representation or warranty, express or implied, *
|
||||
// * regarding this software system or assume any liability for its *
|
||||
// * use. Please see the license in the file LICENSE and URL above *
|
||||
// * for the full disclaimer and the limitation of liability. *
|
||||
// * *
|
||||
// * This code implementation is the result of the scientific and *
|
||||
// * technical work of the GEANT4 collaboration. *
|
||||
// * By using, copying, modifying or distributing the software (or *
|
||||
// * any work based on the software) you agree to acknowledge its *
|
||||
// * use in resulting scientific publications, and indicate your *
|
||||
// * acceptance of all terms of the Geant4 Software license. *
|
||||
// ********************************************************************
|
||||
|
||||
//GEANT4 - Depth-of-Interaction enabled Positron emission tomography (PET) advanced example
|
||||
|
||||
//Authors and contributors
|
||||
|
||||
// Author list to be updated, with names of co-authors and contributors from National Institute of Radiological Sciences (NIRS)
|
||||
|
||||
// Abdella M. Ahmed (1, 2), Andrew Chacon (1, 2), Harley Rutherford (1, 2),
|
||||
// Hideaki Tashima (3), Go Akamatsu (3), Akram Mohammadi (3), Eiji Yoshida (3), Taiga Yamaya (3)
|
||||
// Susanna Guatelli (2), and Mitra Safavi-Naeini (1, 2)
|
||||
|
||||
// (1) Australian Nuclear Science and Technology Organisation, Australia
|
||||
// (2) University of Wollongong, Australia
|
||||
// (3) National Institute of Radiological Sciences, Japan
|
||||
|
||||
|
||||
|
||||
#ifndef doiPETPhysicsList_h
|
||||
#define doiPETPhysicsList_h 1
|
||||
|
||||
#include "G4VUserPhysicsList.hh"
|
||||
#include "G4VModularPhysicsList.hh"
|
||||
#include "G4EmConfigurator.hh"
|
||||
#include "globals.hh"
|
||||
|
||||
class doiPETPhysicsList: public G4VModularPhysicsList
|
||||
{
|
||||
public:
|
||||
doiPETPhysicsList();
|
||||
~doiPETPhysicsList();
|
||||
void ConstructParticle();
|
||||
void ConstructProcess();
|
||||
void SelectModel(G4String val);
|
||||
|
||||
protected:
|
||||
void SetCuts();
|
||||
|
||||
|
||||
private:
|
||||
G4VPhysicsConstructor* emPhysicsList;
|
||||
G4VPhysicsConstructor* decayPhysicsList;
|
||||
G4VPhysicsConstructor* raddecayList;
|
||||
};
|
||||
|
||||
#endif
|
||||
|
||||
|
||||
|
||||
@@ -0,0 +1,74 @@
|
||||
//
|
||||
// ********************************************************************
|
||||
// * License and Disclaimer *
|
||||
// * *
|
||||
// * The Geant4 software is copyright of the Copyright Holders of *
|
||||
// * the Geant4 Collaboration. It is provided under the terms and *
|
||||
// * conditions of the Geant4 Software License, included in the file *
|
||||
// * LICENSE and available at http://cern.ch/geant4/license . These *
|
||||
// * include a list of copyright holders. *
|
||||
// * *
|
||||
// * Neither the authors of this software system, nor their employing *
|
||||
// * institutes,nor the agencies providing financial support for this *
|
||||
// * work make any representation or warranty, express or implied, *
|
||||
// * regarding this software system or assume any liability for its *
|
||||
// * use. Please see the license in the file LICENSE and URL above *
|
||||
// * for the full disclaimer and the limitation of liability. *
|
||||
// * *
|
||||
// * This code implementation is the result of the scientific and *
|
||||
// * technical work of the GEANT4 collaboration. *
|
||||
// * By using, copying, modifying or distributing the software (or *
|
||||
// * any work based on the software) you agree to acknowledge its *
|
||||
// * use in resulting scientific publications, and indicate your *
|
||||
// * acceptance of all terms of the Geant4 Software license. *
|
||||
// ********************************************************************
|
||||
|
||||
//GEANT4 - Depth-of-Interaction enabled Positron emission tomography (PET) advanced example
|
||||
|
||||
//Authors and contributors
|
||||
|
||||
// Author list to be updated, with names of co-authors and contributors from National Institute of Radiological Sciences (NIRS)
|
||||
|
||||
// Abdella M. Ahmed (1, 2), Andrew Chacon (1, 2), Harley Rutherford (1, 2),
|
||||
// Hideaki Tashima (3), Go Akamatsu (3), Akram Mohammadi (3), Eiji Yoshida (3), Taiga Yamaya (3)
|
||||
// Susanna Guatelli (2), and Mitra Safavi-Naeini (1, 2)
|
||||
|
||||
// (1) Australian Nuclear Science and Technology Organisation, Australia
|
||||
// (2) University of Wollongong, Australia
|
||||
// (3) National Institute of Radiological Sciences, Japan
|
||||
|
||||
|
||||
|
||||
#ifndef doiPETPrimaryGeneratorAction_h
|
||||
#define doiPETPrimaryGeneratorAction_h 1
|
||||
|
||||
#include "G4VUserPrimaryGeneratorAction.hh"
|
||||
#include "G4ParticleGun.hh"
|
||||
#include "globals.hh"
|
||||
|
||||
class G4ParticleGun;
|
||||
class G4GeneralParticleSource;
|
||||
class G4Event;
|
||||
|
||||
/// The primary generator action class
|
||||
|
||||
class doiPETPrimaryGeneratorAction : public G4VUserPrimaryGeneratorAction
|
||||
{
|
||||
public:
|
||||
doiPETPrimaryGeneratorAction();
|
||||
void ActivityValue();
|
||||
virtual ~doiPETPrimaryGeneratorAction();
|
||||
|
||||
virtual void GeneratePrimaries(G4Event*);
|
||||
|
||||
const G4GeneralParticleSource* GetParticleGun() const { return fParticleGun; }
|
||||
|
||||
|
||||
|
||||
private:
|
||||
G4GeneralParticleSource* fParticleGun;
|
||||
};
|
||||
|
||||
|
||||
#endif
|
||||
|
||||
@@ -0,0 +1,149 @@
|
||||
//
|
||||
// ********************************************************************
|
||||
// * License and Disclaimer *
|
||||
// * *
|
||||
// * The Geant4 software is copyright of the Copyright Holders of *
|
||||
// * the Geant4 Collaboration. It is provided under the terms and *
|
||||
// * conditions of the Geant4 Software License, included in the file *
|
||||
// * LICENSE and available at http://cern.ch/geant4/license . These *
|
||||
// * include a list of copyright holders. *
|
||||
// * *
|
||||
// * Neither the authors of this software system, nor their employing *
|
||||
// * institutes,nor the agencies providing financial support for this *
|
||||
// * work make any representation or warranty, express or implied, *
|
||||
// * regarding this software system or assume any liability for its *
|
||||
// * use. Please see the license in the file LICENSE and URL above *
|
||||
// * for the full disclaimer and the limitation of liability. *
|
||||
// * *
|
||||
// * This code implementation is the result of the scientific and *
|
||||
// * technical work of the GEANT4 collaboration. *
|
||||
// * By using, copying, modifying or distributing the software (or *
|
||||
// * any work based on the software) you agree to acknowledge its *
|
||||
// * use in resulting scientific publications, and indicate your *
|
||||
// * acceptance of all terms of the Geant4 Software license. *
|
||||
// ********************************************************************
|
||||
//
|
||||
/// \file electromagnetic/TestEm11/include/doiPETRun.hh
|
||||
/// \brief Definition of the doiPETRun class
|
||||
//
|
||||
//
|
||||
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
|
||||
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
|
||||
|
||||
#ifndef doiPETRun_h
|
||||
#define doiPETRun_h 1
|
||||
|
||||
#include "G4Run.hh"
|
||||
#include "G4VProcess.hh"
|
||||
#include "globals.hh"
|
||||
|
||||
#include <iostream>
|
||||
#include <fstream>
|
||||
#include <sstream>
|
||||
#include <map>
|
||||
#include <set>
|
||||
class doiPETDetectorConstruction;
|
||||
class G4ParticleDefinition;
|
||||
class doiPETRunAction;
|
||||
|
||||
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
|
||||
class InteractionInformation;
|
||||
class doiPETAnalysis;
|
||||
class doiPETRun : public G4Run
|
||||
{
|
||||
public:
|
||||
doiPETRun(/*doiPETDetectorConstruction**/);
|
||||
~doiPETRun();
|
||||
|
||||
public:
|
||||
//
|
||||
void GetIntractionInfomation(InteractionInformation*);
|
||||
void FindInteractingCrystal();
|
||||
void Clear();
|
||||
void OpenRun(G4String);
|
||||
void GetEventIDRun(G4int);
|
||||
void CalulateAcquisitionTime();
|
||||
void SetAnnihilationTime(G4double);
|
||||
void SetEventID(G4int);
|
||||
virtual void Merge(const G4Run*);
|
||||
// void EndOfRun();
|
||||
|
||||
private:
|
||||
|
||||
std::multimap< G4int, InteractionInformation* > mapBlockInteraction;
|
||||
std::set<G4int> setBlockInteraction;
|
||||
std::ofstream ofs;
|
||||
G4int eventID;
|
||||
doiPETRunAction* fRunAction;
|
||||
doiPETAnalysis* fAnalysis;
|
||||
G4double totalEdep;
|
||||
G4int blockID, crystalID;
|
||||
|
||||
//
|
||||
G4double activityNow;
|
||||
G4double InitialActivity;
|
||||
G4double halfLife;
|
||||
|
||||
G4double totalTime;
|
||||
G4double prev_totalTime;
|
||||
G4double timeInterval;
|
||||
|
||||
G4ThreeVector interactionPos;
|
||||
//
|
||||
G4double interactionTime;
|
||||
G4double timeOfAnnihil;
|
||||
|
||||
G4int numberofInteractions;
|
||||
G4double edep;
|
||||
G4double edepMax;
|
||||
G4double edep_AfterCrystalBlurring;
|
||||
|
||||
};
|
||||
|
||||
|
||||
//The following is to get interaction information
|
||||
class InteractionInformation
|
||||
{
|
||||
|
||||
public:
|
||||
InteractionInformation(){;};
|
||||
~InteractionInformation(){;};
|
||||
|
||||
//set energy deposition
|
||||
void SetEdep(G4double e) {edep=e;};
|
||||
|
||||
//set block number
|
||||
void SetBlockNo(G4int n) {blockNo=n;};
|
||||
|
||||
//set crystal ID (this is continuous numbering of crystals)
|
||||
void SetCrystalNo(G4int n) {crystalNo=n;};
|
||||
|
||||
//set global time
|
||||
void SetGlobalTime(G4double t){globalTime=t;};
|
||||
|
||||
//set interaction position with respect to the crystal axis (local position)
|
||||
void SetInteractionPositionInCrystal(G4ThreeVector pos){crystalPosition = pos;};
|
||||
|
||||
|
||||
G4double GetEdep() {return edep;};
|
||||
G4int GetBlockNo() {return blockNo;};
|
||||
G4int GetCrystalNo() {return crystalNo;};
|
||||
G4double GetGlobalTime() {return globalTime;};
|
||||
|
||||
//Interaction position in the detector
|
||||
G4ThreeVector GetInteractionPositionInCrystal(){return crystalPosition;};
|
||||
|
||||
|
||||
private:
|
||||
G4double edep;
|
||||
G4double globalTime;
|
||||
G4int blockNo;
|
||||
G4int crystalNo;
|
||||
G4ThreeVector crystalPosition;
|
||||
|
||||
};
|
||||
|
||||
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
|
||||
|
||||
#endif
|
||||
|
||||
@@ -0,0 +1,72 @@
|
||||
//
|
||||
// ********************************************************************
|
||||
// * License and Disclaimer *
|
||||
// * *
|
||||
// * The Geant4 software is copyright of the Copyright Holders of *
|
||||
// * the Geant4 Collaboration. It is provided under the terms and *
|
||||
// * conditions of the Geant4 Software License, included in the file *
|
||||
// * LICENSE and available at http://cern.ch/geant4/license . These *
|
||||
// * include a list of copyright holders. *
|
||||
// * *
|
||||
// * Neither the authors of this software system, nor their employing *
|
||||
// * institutes,nor the agencies providing financial support for this *
|
||||
// * work make any representation or warranty, express or implied, *
|
||||
// * regarding this software system or assume any liability for its *
|
||||
// * use. Please see the license in the file LICENSE and URL above *
|
||||
// * for the full disclaimer and the limitation of liability. *
|
||||
// * *
|
||||
// * This code implementation is the result of the scientific and *
|
||||
// * technical work of the GEANT4 collaboration. *
|
||||
// * By using, copying, modifying or distributing the software (or *
|
||||
// * any work based on the software) you agree to acknowledge its *
|
||||
// * use in resulting scientific publications, and indicate your *
|
||||
// * acceptance of all terms of the Geant4 Software license. *
|
||||
// ********************************************************************
|
||||
|
||||
//GEANT4 - Depth-of-Interaction enabled Positron emission tomography (PET) advanced example
|
||||
|
||||
//Authors and contributors
|
||||
|
||||
// Author list to be updated, with names of co-authors and contributors from National Institute of Radiological Sciences (NIRS)
|
||||
|
||||
// Abdella M. Ahmed (1, 2), Andrew Chacon (1, 2), Harley Rutherford (1, 2),
|
||||
// Hideaki Tashima (3), Go Akamatsu (3), Akram Mohammadi (3), Eiji Yoshida (3), Taiga Yamaya (3)
|
||||
// Susanna Guatelli (2), and Mitra Safavi-Naeini (1, 2)
|
||||
|
||||
// (1) Australian Nuclear Science and Technology Organisation, Australia
|
||||
// (2) University of Wollongong, Australia
|
||||
// (3) National Institute of Radiological Sciences, Japan
|
||||
|
||||
|
||||
#ifndef doiPETRunAction_h
|
||||
#define doiPETRunAction_h 1
|
||||
|
||||
#include "G4UserRunAction.hh"
|
||||
#include "globals.hh"
|
||||
|
||||
class doiPETDetectorConstruction;
|
||||
class doiPETRun;
|
||||
class doiPETPrimaryGeneratorAction;
|
||||
//class HistoManager;
|
||||
|
||||
/// doiPETRun action class
|
||||
|
||||
class doiPETRunAction : public G4UserRunAction
|
||||
{
|
||||
public:
|
||||
//doiPETRunAction();
|
||||
doiPETRunAction(/*doiPETDetectorConstruction*, doiPETPrimaryGeneratorAction**/);
|
||||
virtual ~doiPETRunAction();
|
||||
virtual G4Run* GenerateRun();
|
||||
|
||||
virtual void BeginOfRunAction(const G4Run*);
|
||||
virtual void EndOfRunAction(const G4Run*);
|
||||
|
||||
private:
|
||||
doiPETRun* fRun;
|
||||
//HistoManager* fHistoManager;
|
||||
|
||||
};
|
||||
#endif
|
||||
|
||||
|
||||
@@ -0,0 +1,60 @@
|
||||
//
|
||||
// ********************************************************************
|
||||
// * License and Disclaimer *
|
||||
// * *
|
||||
// * The Geant4 software is copyright of the Copyright Holders of *
|
||||
// * the Geant4 Collaboration. It is provided under the terms and *
|
||||
// * conditions of the Geant4 Software License, included in the file *
|
||||
// * LICENSE and available at http://cern.ch/geant4/license . These *
|
||||
// * include a list of copyright holders. *
|
||||
// * *
|
||||
// * Neither the authors of this software system, nor their employing *
|
||||
// * institutes,nor the agencies providing financial support for this *
|
||||
// * work make any representation or warranty, express or implied, *
|
||||
// * regarding this software system or assume any liability for its *
|
||||
// * use. Please see the license in the file LICENSE and URL above *
|
||||
// * for the full disclaimer and the limitation of liability. *
|
||||
// * *
|
||||
// * This code implementation is the result of the scientific and *
|
||||
// * technical work of the GEANT4 collaboration. *
|
||||
// * By using, copying, modifying or distributing the software (or *
|
||||
// * any work based on the software) you agree to acknowledge its *
|
||||
// * use in resulting scientific publications, and indicate your *
|
||||
// * acceptance of all terms of the Geant4 Software license. *
|
||||
// ********************************************************************
|
||||
|
||||
//GEANT4 - Depth-of-Interaction enabled Positron emission tomography (PET) advanced example
|
||||
|
||||
//Authors and contributors
|
||||
|
||||
// Author list to be updated, with names of co-authors and contributors from National Institute of Radiological Sciences (NIRS)
|
||||
|
||||
// Abdella M. Ahmed (1, 2), Andrew Chacon (1, 2), Harley Rutherford (1, 2),
|
||||
// Hideaki Tashima (3), Go Akamatsu (3), Akram Mohammadi (3), Eiji Yoshida (3), Taiga Yamaya (3)
|
||||
// Susanna Guatelli (2), and Mitra Safavi-Naeini (1, 2)
|
||||
|
||||
// (1) Australian Nuclear Science and Technology Organisation, Australia
|
||||
// (2) University of Wollongong, Australia
|
||||
// (3) National Institute of Radiological Sciences, Japan
|
||||
|
||||
|
||||
#ifndef doiPETSteppingAction_h
|
||||
#define doiPETSteppingAction_h 1
|
||||
|
||||
#include "G4UserSteppingAction.hh"
|
||||
#include "globals.hh"
|
||||
|
||||
class doiPETEventAction;
|
||||
class doiPETSteppingAction : public G4UserSteppingAction
|
||||
{
|
||||
public:
|
||||
doiPETSteppingAction();
|
||||
virtual ~doiPETSteppingAction();
|
||||
virtual void UserSteppingAction(const G4Step*);
|
||||
|
||||
private:
|
||||
//
|
||||
};
|
||||
|
||||
#endif
|
||||
|
||||
Reference in New Issue
Block a user