Import Geant4 10.5.0 source tree

examples/advanced/doiPET/doiPET.cc

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+// ********************************************************************
+// * License and Disclaimer                                           *
+// *                                                                  *
+// * The  Geant4 software  is  copyright of the Copyright Holders  of *
+// * the Geant4 Collaboration.  It is provided  under  the terms  and *
+// * conditions of the Geant4 Software License,  included in the file *
+// * LICENSE and available at  http://cern.ch/geant4/license .  These *
+// * include a list of copyright holders.                             *
+// *                                                                  *
+// * Neither the authors of this software system, nor their employing *
+// * institutes,nor the agencies providing financial support for this *
+// * work  make  any representation or  warranty, express or implied, *
+// * regarding  this  software system or assume any liability for its *
+// * use.  Please see the license in the file  LICENSE  and URL above *
+// * for the full disclaimer and the limitation of liability.         *
+// *                                                                  *
+// * This  code  implementation is the result of  the  scientific and *
+// * technical work of the GEANT4 collaboration.                      *
+// * By using,  copying,  modifying or  distributing the software (or *
+// * any work based  on the software)  you  agree  to acknowledge its *
+// * use  in  resulting  scientific  publications,  and indicate your *
+// * acceptance of all terms of the Geant4 Software license.          *
+// ********************************************************************
+
+//GEANT4 - Depth-of-Interaction enabled Positron emission tomography (PET) advanced example 
+
+//Authors and contributors
+
+// Author list to be updated, with names of co-authors and contributors from National Institute of Radiological Sciences (NIRS)
+
+// Abdella M. Ahmed (1, 2), Andrew Chacon (1, 2), Harley Rutherford (1, 2),
+// Hideaki Tashima (3), Go Akamatsu (3), Akram Mohammadi (3), Eiji Yoshida (3), Taiga Yamaya (3)
+// Susanna Guatelli (2), and Mitra Safavi-Naeini (1, 2)
+
+// (1) Australian Nuclear Science and Technology Organisation, Australia
+// (2) University of Wollongong, Australia
+// (3) National Institute of Radiological Sciences, Japan
+
+
+
+//#include "doiPETGlobalParameters.hh"
+#include "doiPETDetectorConstruction.hh"
+#include "doiPETPhysicsList.hh"
+#include "doiPETAnalysis.hh"
+#include "doiPETActionInitialization.hh"
+
+#include "Randomize.hh"
+#include "G4UImanager.hh"
+#include "G4VisExecutive.hh"
+#include "G4UIExecutive.hh"
+#include "G4SystemOfUnits.hh"
+
+#ifdef G4MULTITHREADED
+#include "G4MTRunManager.hh"
+#else
+#include "G4RunManager.hh"
+#endif
+
+//
+#ifdef G4VIS_USE
+#include "G4VisExecutive.hh"
+#endif
+
+#ifdef G4UI_USE
+#include "G4UIExecutive.hh"
+#endif
+//
+//////////////////////////////////////////////////////////////////////////////
+
+int main(int argc,char** argv)
+{
+	// Choose the Random engine
+	G4Random::setTheEngine(new CLHEP::RanecuEngine);
+
+#ifdef G4MULTITHREADED
+
+	G4MTRunManager* runManager = new G4MTRunManager;
+	runManager->SetNumberOfThreads(4); // Is equal to 2 by default
+#else
+
+	G4RunManager* runManager = new G4RunManager;
+#endif
+
+	runManager->SetUserInitialization(new doiPETDetectorConstruction);
+
+	runManager->SetUserInitialization(new doiPETPhysicsList);
+
+	// Set user action initialization
+	runManager->SetUserInitialization(new doiPETActionInitialization());
+
+	//Initialize analysis
+	doiPETAnalysis* ptrAnalysis = doiPETAnalysis::GetInstance();
+
+
+	G4double act  = 1000000 * becquerel;//Activity is set via run.mac file
+	ptrAnalysis->SetActivity(act);
+
+	G4double halfLife = 109.771 * 60 * s; //Halflife of F-18 as a default
+	ptrAnalysis -> SetIsotopeHalfLife(halfLife);
+
+	//Blurring specification of the scanner. see inputParameter.txt
+	ptrAnalysis -> BlurringParameters();
+
+	//Open file to write the output of the simulation
+	ptrAnalysis->Open("result"); //file extention is affixed based on the type of the output (.root for root or .data for ascii)
+
+
+	//
+	ptrAnalysis -> PMTPosition();
+	//Read reflector pattern from the inputParameter.txt file
+	ptrAnalysis->ReadReflectorPattern();
+
+	// Get the pointer to the User Interface manager
+	G4UImanager* UI = G4UImanager::GetUIpointer();
+
+
+
+	// Process macro or start UI session
+	if (argc!=1)   // batch mode  
+	{
+		G4String command = "/control/execute ";
+		G4String fileName = argv[1];
+		UI->ApplyCommand(command+fileName);
+	}
+
+	else           //define visualization and UI terminal for interactive mode
+	{ 
+#ifdef G4VIS_USE
+		G4VisManager* visManager = new G4VisExecutive;
+		visManager->Initialize();
+#endif    
+
+#ifdef G4UI_USE
+		G4UIExecutive * ui = new G4UIExecutive(argc,argv);      
+		ui->SessionStart();
+		delete ui;
+#endif
+
+		//
+#ifdef G4VIS_USE
+		delete visManager;
+#endif     
+	}
+
+	//close the file
+	ptrAnalysis->Close();
+	ptrAnalysis->Delete();
+	
+	delete runManager;
+	return 0;
+
+}
+
+//////////////////////////////////////////////////////////////////////////////
+