Import Geant4 9.2.0 source tree

examples/advanced/hadrontherapy/macro/modulatorMacro.mac

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+
+# ---------------------------------------------------------
+# THIS MACRO PERMIT TO RECONSTRUCT THE SPREAD OUT BRAGG PEAK
+# MODULATING THE PROTON BEAM ENERGY BY MEANS OF A ROTATING
+# MODULATOR WHEEL.
+# HERE THE WHEEL IS ROTATED OF 1 DEGREE AT EACH RUN AND 
+# ONE THOUSAND PROTON HYSTORIES ARE SIMULATED IN EACH 
+# RUN
+# IN ORDER TO INCREASE THE RESOLUTION MORE EVENT CAN ADDED
+# OR A SMALLER ANGLE CAN BE CHOSEN.
+# 
+# NOTE THAT THE MODULATOR MATERIAL IS POLTMETHYLMETHACRILATE 
+# (PMMA) FOR DEFAULT. IF ONE WANT CARRY OUT A SIMULATION WITHOUT 
+# THE MODULATOR HE/SHE MUST SET "Air" the <<ModMater>> in the
+# <<GetMater>> function of the HadrontherapyModulator.cc class
+#
+# USERS SHOULD GIVE A LOOK TO THE HELP OF THE IDLE TO KNOW
+# THE ACTIVATED MESSSENGERS FOR THE GEOMETRY
+#
+# ADDITIONAL INFORMATIONS ON THE MESSENGER AVAILABLE CAN BE FOUND
+# INSIDE THE HADRONTHERAPY DOCUMENTATION (http://www.ge.infn.it/geant4/examples/).
+# 
+# ANYWAY SEND ME AN E-MAIL FOR ANY QUESTION: cirrone@lns.infn.it.   
+# --------------------------------------------------------------------------------  
+
+/control/verbose 1
+/tracking/verbose 0
+/run/verbose 0
+/event/verbose 0
+
+
+# SETTING FOR THE PHYSICS MODELS
+/physics/addPhysics Decay
+/physics/addPhysics EM-Photon-EPDL
+/physics/addPhysics EM-Electron-EEDL
+/physics/addPhysics EM-Positron-Standard
+/physics/addPhysics EM-HadronIon-LowE
+/physics/addPhysics EM-Muon-Standard
+/physics/addPhysics HadronicEl-HadronIon-LElastic
+/physics/addPhysics HadronicInel-ProtonNeutron-LEP
+/physics/addPhysics HadronicInel-Ion-LEP
+/physics/addPhysics HadronicInel-Pion-LEP
+/physics/addPhysics HadronicAtRest-MuonMinus-Capture
+
+/run/initialize	
+
+# SET OF THE VISUALISATION CHARACTERISTICS
+/vis/scene/create
+/vis/open OGLIX
+/vis/viewer/zoom 3.5
+/vis/viewer/set/viewpointThetaPhi  50 130 deg
+/vis/viewer/pan -60 40 cm
+/tracking/storeTrajectory 1
+/vis/scene/endOfEventAction accumulate
+
+# IF YOU WANT A RANGE SHIFTER PLEASE CHANGE
+# THE FOLLOWIG PARAMETERS
+# SETTING FOR THE RANGE SHIFTER
+
+/beamLine/RangeShifter/RSMat Air
+/beamLine/RangeShifter/thickness 1 cm
+
+
+# START OF THE MODULATOR ROTATION
+# IT CONSISTS IN A COMPLETE ROTATION 
+# OF THE WHHEEL (360 DEG)
+
+/run/beamOn 10
+/vis/viewer/flush
+
+/modulator/angle 1 deg
+/run/beamOn 10
+/vis/viewer/flush
+
+/modulator/angle 1 deg
+/run/beamOn 10
+/vis/viewer/flush
+

examples/advanced/hadrontherapy/macro/packageQGSP_BIC.mac

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+############################################################################
+#
+# PHYSICS LIST:
+# ============= 
+#
+#  Geant4 Physics List: 
+#  
+#   - QGSP_BIC 3.3
+#
+##############################################################################
+
+
+####################
+# VERBOSITY LEVELS #
+####################
+
+/control/verbose 1
+/tracking/verbose 0
+/run/verbose 0
+/event/verbose 0
+
+
+###########
+# PHYSICS #
+###########
+
+/physics/addPackage QGSP_BIC
+
+
+##############################
+# BEAM LINE SETTINGS AND RUN #
+##############################
+
+/run/initialize
+
+###  IF YOU WANT A RANGE SHIFTER PLEASE CHANGE
+###  THE FOLLOWIG PARAMETERS
+###  SETTING FOR THE RANGE SHIFTER
+
+#/beamLine/RangeShifter/thickness 4 cm
+#/beamLine/RangeShifter/RSMat Water
+
+/run/beamOn 200
+
+
+

examples/advanced/hadrontherapy/macro/physicsAllOptions.mac

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+############################################################################
+#
+#  This example macro file provides an overview of all possible physics
+#  options available in the Hadrontherapy advanced example. A user can 
+#  create his own physics list by combining different physics constructors. 
+#
+############################################################################
+#
+#  Summary of available physics options and associated macro commands: 
+#
+#  Commands are arranged by the type of interactions and the different
+#  particles.
+#
+#  NOTE: For a given type of physics processes and a given particle ONLY ONE
+#  physics constructor should be activated (the different options are
+#  indicated by "Option X", where in some cases only one option exists).
+#
+#  To create a complete physics list, a physics constructor must be
+#  activated for each subpoint (A,B,C,...) of each of the different physics
+#  interactions (I-V).
+#  
+#  Below the overview one can find an example set of macro commands for 
+#  activating physics constructors, where alternative options are also
+#  specified (as comments).
+#
+#
+#  I) Decay:
+#  ---------
+#    A. Unstable particles
+#        Option 1: Decay model
+#                  Macro command: /physics/addPhysics Decay
+#
+#
+#  II) Electromagnetic Physics
+#  ---------------------------
+#    A. Photons
+#        Option 1: Livermore-based models (Low-energy package)
+#                  Macro command: /physics/addPhysics EM-Photon-EPDL
+#        Option 2: Penelope-like models (Low-energy package)
+#                  Macro command: /physics/addPhysics EM-Photon-Penelope
+#        Option 3: Standard models (Standard package)
+#                  Macro command: /physics/addPhysics EM-Photon-Standard
+#
+#    B. Electrons
+#        Option 1: Livermore-based models (Low-energy package)
+#                  Macro command: /physics/addPhysics EM-Electron-EEDL
+#        Option 2: Penelope-like models (Low-energy package)
+#                  Macro command: /physics/addPhysics EM-Electron-Penelope
+#        Option 3: Standard models (Standard package)
+#                  Macro command: /physics/addPhysics EM-Electron-Standard
+#
+#    C. Charged hadrons, ions 
+#        Option 1: ICRU49-based models (Low-energy package)
+#                  Macro command: /physics/addPhysics EM-HadronIon-LowE
+#        Option 2: Ziegler77-based models (Low-energy package)
+#                  Macro command: /physics/addPhysics EM-HadronIon-LowEZiegler1977
+#        Option 3: Ziegler85-based models (Low-energy package)
+#                  Macro command: /physics/addPhysics EM-HadronIon-LowEZiegler1985
+#        Option 4: Standard models (Standard package)
+#                  Macro command: /physics/addPhysics EM-HadronIon-Standard
+#
+#    D. Positrons
+#        Option 1: Penelope-like models (Low-energy package)
+#                  Macro command: /physics/addPhysics EM-Positron-Penelope
+#        Option 2: Standard models (Standard package)
+#                  Macro command: /physics/addPhysics EM-Positron-Standard
+#
+#    E. Muons
+#        Option 1: Standard models (Standard package)
+#                  Macro command: /physics/addPhysics EM-Muon-Standard
+# 
+#
+#  III) Hadronic Physics (elastic)
+#  -------------------------------
+#    A. Hadrons (protons, neutrons, pions), ions (deuterons, tritons, alphas)
+#        Option 1: LEP elastic scattering model 
+#                  Macro command: /physics/addPhysics HadronicEl-HadronIon-LElastic
+#        Option 2: Bertini model (hadrons), LEP model (ions)
+#                  Macro command: /physics/addPhysics HadronicEl-HadronIon-Bert
+#        Option 3: UHadronElasticProcess
+#                  Macro command: /physics/addPhysics HadronicEl-HadronIon-UElastic
+#        Option 4: CHIPS (protons, neutrons), LEP model (other hadrons, ions)
+#                  Macro command: /physics/addPhysics HadronicEl-HadronIon-QElastic
+#
+#
+#  IV) Hadronic Physics (inelastic)
+#  --------------------------------
+#    A. Protons, neutrons
+#        Option 1: LEP model
+#                  Macro command: /physics/addPhysics HadronicInel-ProtonNeutron-LEP       
+#        Option 2: Precompound model (default evaporation)
+#                  Macro command: /physics/addPhysics HadronicInel-ProtonNeutron-Prec          
+#        Option 3: Precompound model (GEM evaporation)
+#                  Macro command: /physics/addPhysics HadronicInel-ProtonNeutron-PrecGEM          
+#        Option 4: Precompound model (default evaporation, Fermi break-up)
+#                  Macro command: /physics/addPhysics HadronicInel-ProtonNeutron-PrecFermi         
+#        Option 5: Precompound model (GEM evaporation, Fermi break-up)
+#                  Macro command: /physics/addPhysics HadronicInel-ProtonNeutron-PrecGEMFermi         
+#        Option 6: Bertini model
+#                  Macro command: /physics/addPhysics HadronicInel-ProtonNeutron-Bert         
+#        Option 7: Binary cascade model
+#                  Macro command: /physics/addPhysics HadronicInel-ProtonNeutron-Bin        
+#
+#    B. Pions
+#        Option 1: LEP model
+#                  Macro command: /physics/addPhysics HadronicInel-Pion-LEP       
+#        Option 2: Bertini model
+#                  Macro command: /physics/addPhysics HadronicInel-Pion-Bert       
+#        
+#    C. Ions (deuterons, tritons, alphas)
+#        Option 1: LEP model
+#                  Macro command: /physics/addPhysics HadronicInel-Ion-LEP       
+#
+#
+#  V) Hadronic Physics (at rest)
+#  -----------------------------
+#    A. Muons-
+#        Option 1: Muon Minus Capture model
+#                  Macro command: /physics/addPhysics HadronicAtRest-MuonMinus-Capture 
+#
+#
+#
+##############################################################################
+
+
+####################
+# VERBOSITY LEVELS #
+####################
+
+/control/verbose 1
+/tracking/verbose 0
+/run/verbose 0
+/event/verbose 0
+
+
+###########
+# PHYSICS #
+###########
+
+/physics/addPhysics Decay
+
+/physics/addPhysics EM-Photon-EPDL
+### Alternatively:
+### /physics/addPhysics EM-Photon-Penelope
+### /physics/addPhysics EM-Photon-Standard
+
+/physics/addPhysics EM-Electron-EEDL
+### Alternatively:
+### /physics/addPhysics EM-Electron-Penelope
+### /physics/addPhysics EM-Electron-Standard
+
+/physics/addPhysics EM-HadronIon-LowE
+### Alternatively:
+### /physics/addPhysics EM-HadronIon-LowEZiegler1977
+### /physics/addPhysics EM-HadronIon-LowEZiegler1985
+### /physics/addPhysics EM-HadronIon-Standard
+
+/physics/addPhysics EM-Positron-Penelope
+### Alternatively:
+### /physics/addPhysics EM-Positron-Standard
+
+/physics/addPhysics EM-Muon-Standard
+
+/physics/addPhysics HadronicEl-HadronIon-LElastic
+### Alternatively:
+### /physics/addPhysics HadronicEl-HadronIon-Bert
+### /physics/addPhysics HadronicEl-HadronIon-UElastic
+### /physics/addPhysics HadronicEl-HadronIon-QElastic
+
+/physics/addPhysics HadronicInel-ProtonNeutron-LEP   
+### Alternatively:
+### /physics/addPhysics HadronicInel-ProtonNeutron-Prec          
+### /physics/addPhysics HadronicInel-ProtonNeutron-PrecGEM          
+### /physics/addPhysics HadronicInel-ProtonNeutron-PrecFermi         
+### /physics/addPhysics HadronicInel-ProtonNeutron-PrecGEMFermi         
+### /physics/addPhysics HadronicInel-ProtonNeutron-Bert         
+### /physics/addPhysics HadronicInel-ProtonNeutron-Bin  
+      
+/physics/addPhysics HadronicInel-Pion-LEP       
+### Alternatively:
+### /physics/addPhysics HadronicInel-Pion-Bert       
+
+/physics/addPhysics HadronicInel-Ion-LEP       
+
+/physics/addPhysics HadronicAtRest-MuonMinus-Capture 
+
+
+##############################
+# BEAM LINE SETTINGS AND RUN #
+##############################
+
+/run/initialize
+
+###  IF YOU WANT A RANGE SHIFTER PLEASE CHANGE
+###  THE FOLLOWIG PARAMETERS
+###  SETTING FOR THE RANGE SHIFTER
+
+#/beamLine/RangeShifter/thickness 4 cm
+#/beamLine/RangeShifter/RSMat Water
+
+/run/beamOn 200
+
+
+

examples/advanced/hadrontherapy/macro/physicsElectromagneticICRU49.mac

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+############################################################################
+#
+# PHYSICS LIST:
+# ============= 
+#
+#  Decay:
+#  ------
+#    * Decay of all unstable particles
+#
+#
+#  Electromagnetic Physics
+#  -----------------------
+#    * Livermore-based models for photons, electrons
+#    * ICRU49-based models for charged hadrons, ions 
+#    * Standard models for positrons, muons 
+#
+# 
+#  Hadronic Physics (elastic)
+#  --------------------------
+#    * LEP elastic scattering model for hadrons (protons, 
+#      neutrons, pions), ions (deuterons, tritons, alphas)
+#
+#
+#  Hadronic Physics (inelastic)
+#  ----------------------------
+#    * LEP model for protons, neutrons
+#    * Fission and capture models for neutrons
+#    * LEP model for ions (deuterons, tritons, alphas)
+#    * LEP model for pions (pions+, pions-)
+#
+#
+#  Hadronic Physics (inelastic)
+#  ----------------------------
+#    * Capture model for muons-
+#
+##############################################################################
+
+
+####################
+# VERBOSITY LEVELS #
+####################
+
+/control/verbose 1
+/tracking/verbose 0
+/run/verbose 0
+/event/verbose 0
+
+
+###########
+# PHYSICS #
+###########
+
+###  A) EM PHYSICS AND DECAY
+
+/physics/addPhysics Decay
+/physics/addPhysics EM-Photon-EPDL
+/physics/addPhysics EM-Electron-EEDL
+/physics/addPhysics EM-Positron-Standard
+/physics/addPhysics EM-HadronIon-LowE
+/physics/addPhysics EM-Muon-Standard
+
+###  B) HADRONIC PHYSICS
+
+/physics/addPhysics HadronicEl-HadronIon-LElastic
+/physics/addPhysics HadronicInel-ProtonNeutron-LEP
+/physics/addPhysics HadronicInel-Ion-LEP
+/physics/addPhysics HadronicInel-Pion-LEP
+/physics/addPhysics HadronicAtRest-MuonMinus-Capture
+
+
+##############################
+# BEAM LINE SETTINGS AND RUN #
+##############################
+
+/run/initialize
+
+###  IF YOU WANT A RANGE SHIFTER PLEASE CHANGE
+###  THE FOLLOWIG PARAMETERS
+###  SETTING FOR THE RANGE SHIFTER
+
+#/beamLine/RangeShifter/thickness 4 cm
+#/beamLine/RangeShifter/RSMat Water
+
+/run/beamOn 500000
+
+
+

examples/advanced/hadrontherapy/macro/physicsElectromagneticStandard.mac

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+############################################################################
+#
+# PHYSICS LIST:
+# ============= 
+#
+#  Decay:
+#  ------
+#    * Decay of all unstable particles
+#
+#
+#  Electromagnetic Physics
+#  -----------------------
+#    * Standard models for photons, electrons
+#    * Standard models for charged hadrons, ions 
+#    * Standard models for positrons, muons 
+#
+# 
+#  Hadronic Physics (elastic)
+#  --------------------------
+#    * LEP elastic scattering model for hadrons (protons, 
+#      neutrons, pions), ions (deuterons, tritons, alphas)
+#
+#
+#  Hadronic Physics (inelastic)
+#  ----------------------------
+#    * Precompound Model (default evaporation, Fermi break-up)
+#      for protons, neutrons
+#    * Fission and capture models for neutrons
+#    * LEP model for ions (deuterons, tritons, alphas)
+#    * LEP model for pions (pions+, pions-)
+#
+#
+#  Hadronic Physics (inelastic)
+#  ----------------------------
+#    * Capture model for muons-
+#
+##############################################################################
+
+
+####################
+# VERBOSITY LEVELS #
+####################
+
+/control/verbose 1
+/tracking/verbose 0
+/run/verbose 0
+/event/verbose 0
+
+
+###########
+# PHYSICS #
+###########
+
+###  A) EM PHYSICS AND DECAY
+
+/physics/addPhysics Decay
+/physics/addPhysics EM-Photon-Standard
+/physics/addPhysics EM-Electron-Standard
+/physics/addPhysics EM-Positron-Standard
+/physics/addPhysics EM-HadronIon-Standard
+/physics/addPhysics EM-Muon-Standard
+
+###  B) HADRONIC PHYSICS
+
+/physics/addPhysics HadronicEl-HadronIon-LElastic
+/physics/addPhysics HadronicInel-ProtonNeutron-LEP
+/physics/addPhysics HadronicInel-Ion-LEP
+/physics/addPhysics HadronicInel-Pion-LEP
+/physics/addPhysics HadronicAtRest-MuonMinus-Capture
+
+
+##############################
+# BEAM LINE SETTINGS AND RUN #
+##############################
+
+/run/initialize
+
+###  IF YOU WANT A RANGE SHIFTER PLEASE CHANGE
+###  THE FOLLOWIG PARAMETERS
+###  SETTING FOR THE RANGE SHIFTER
+
+#/beamLine/RangeShifter/thickness 4 cm
+#/beamLine/RangeShifter/RSMat Water
+
+/run/beamOn 5000
+
+
+

examples/advanced/hadrontherapy/macro/physicsElectromagneticZiegler77.mac

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+############################################################################
+#
+# PHYSICS LIST:
+# ============= 
+#
+#  Decay:
+#  ------
+#    * Decay of all unstable particles
+#
+#
+#  Electromagnetic Physics
+#  -----------------------
+#    * Livermore-based models for photons, electrons
+#    * Ziegler77-based models for charged hadrons, ions 
+#    * Standard models for positrons, muons 
+#
+# 
+#  Hadronic Physics (elastic)
+#  --------------------------
+#    * LEP elastic scattering model for hadrons (protons, 
+#      neutrons, pions), ions (deuterons, tritons, alphas)
+#
+#
+#  Hadronic Physics (inelastic)
+#  ----------------------------
+#    * LEP model for protons, neutrons
+#    * Fission and capture models for neutrons
+#    * LEP model for ions (deuterons, tritons, alphas)
+#    * LEP model for pions (pions+, pions-)
+#
+#
+#  Hadronic Physics (inelastic)
+#  ----------------------------
+#    * Capture model for muons-
+#
+##############################################################################
+
+
+####################
+# VERBOSITY LEVELS #
+####################
+
+/control/verbose 1
+/tracking/verbose 0
+/run/verbose 0
+/event/verbose 0
+
+
+###########
+# PHYSICS #
+###########
+
+###  A) EM PHYSICS AND DECAY
+
+/physics/addPhysics Decay
+/physics/addPhysics EM-Photon-EPDL
+/physics/addPhysics EM-Electron-EEDL
+/physics/addPhysics EM-Positron-Standard
+/physics/addPhysics EM-HadronIon-LowEZiegler1977
+/physics/addPhysics EM-Muon-Standard
+
+###  B) HADRONIC PHYSICS
+
+/physics/addPhysics HadronicEl-HadronIon-LElastic
+/physics/addPhysics HadronicInel-ProtonNeutron-LEP
+/physics/addPhysics HadronicInel-Ion-LEP
+/physics/addPhysics HadronicInel-Pion-LEP
+/physics/addPhysics HadronicAtRest-MuonMinus-Capture
+
+
+##############################
+# BEAM LINE SETTINGS AND RUN #
+##############################
+
+/run/initialize
+
+###  IF YOU WANT A RANGE SHIFTER PLEASE CHANGE
+###  THE FOLLOWIG PARAMETERS
+###  SETTING FOR THE RANGE SHIFTER
+
+#/beamLine/RangeShifter/thickness 4 cm
+#/beamLine/RangeShifter/RSMat Water
+
+/run/beamOn 500000
+
+
+

examples/advanced/hadrontherapy/macro/physicsElectromagneticZiegler85.mac

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+############################################################################
+#
+# PHYSICS LIST:
+# ============= 
+#
+#  Decay:
+#  ------
+#    * Decay of all unstable particles
+#
+#
+#  Electromagnetic Physics
+#  -----------------------
+#    * Livermore-based models for photons, electrons
+#    * Ziegler85-based models for charged hadrons, ions 
+#    * Standard models for positrons, muons 
+#
+# 
+#  Hadronic Physics (elastic)
+#  --------------------------
+#    * LEP elastic scattering model for hadrons (protons, 
+#      neutrons, pions), ions (deuterons, tritons, alphas)
+#
+#
+#  Hadronic Physics (inelastic)
+#  ----------------------------
+#    * LEP model for protons, neutrons
+#    * Fission and capture models for neutrons
+#    * LEP model for ions (deuterons, tritons, alphas)
+#    * LEP model for pions (pions+, pions-)
+#
+#
+#  Hadronic Physics (inelastic)
+#  ----------------------------
+#    * Capture model for muons-
+#
+##############################################################################
+
+
+####################
+# VERBOSITY LEVELS #
+####################
+
+/control/verbose 1
+/tracking/verbose 0
+/run/verbose 0
+/event/verbose 0
+
+
+###########
+# PHYSICS #
+###########
+
+###  A) EM PHYSICS AND DECAY
+
+/physics/addPhysics Decay
+/physics/addPhysics EM-Photon-EPDL
+/physics/addPhysics EM-Electron-EEDL
+/physics/addPhysics EM-Positron-Standard
+/physics/addPhysics EM-HadronIon-LowEZiegler1985
+/physics/addPhysics EM-Muon-Standard
+
+###  B) HADRONIC PHYSICS
+
+/physics/addPhysics HadronicEl-HadronIon-LElastic
+/physics/addPhysics HadronicInel-ProtonNeutron-LEP
+/physics/addPhysics HadronicInel-Ion-LEP
+/physics/addPhysics HadronicInel-Pion-LEP
+/physics/addPhysics HadronicAtRest-MuonMinus-Capture
+
+
+##############################
+# BEAM LINE SETTINGS AND RUN #
+##############################
+
+/run/initialize
+
+###  IF YOU WANT A RANGE SHIFTER PLEASE CHANGE
+###  THE FOLLOWIG PARAMETERS
+###  SETTING FOR THE RANGE SHIFTER
+
+#/beamLine/RangeShifter/thickness 4 cm
+#/beamLine/RangeShifter/RSMat Water
+
+/run/beamOn 500000
+
+
+

examples/advanced/hadrontherapy/macro/physicsHadronicBertini.mac

@@ -0,0 +1,87 @@
+############################################################################
+#
+# PHYSICS LIST:
+# ============= 
+#
+#  Decay:
+#  ------
+#    * Decay of all unstable particles
+#
+#
+#  Electromagnetic Physics
+#  -----------------------
+#    * Livermore-based models for photons, electrons
+#    * ICRU49-based models for charged hadrons, ions 
+#    * Standard models for positrons, muons 
+#
+# 
+#  Hadronic Physics (elastic)
+#  --------------------------
+#    * LEP elastic scattering model for hadrons (protons, 
+#      neutrons, pions), ions (deuterons, tritons, alphas)
+#
+#
+#  Hadronic Physics (inelastic)
+#  ----------------------------
+#    * Bertini model for protons, neutrons
+#    * Fission and capture models for neutrons
+#    * LEP model for ions (deuterons, tritons, alphas)
+#    * LEP model for pions (pions+, pions-)
+#
+#
+#  Hadronic Physics (inelastic)
+#  ----------------------------
+#    * Capture model for muons-
+#
+##############################################################################
+
+
+####################
+# VERBOSITY LEVELS #
+####################
+
+/control/verbose 1
+/tracking/verbose 0
+/run/verbose 0
+/event/verbose 0
+
+
+###########
+# PHYSICS #
+###########
+
+###  A) EM PHYSICS AND DECAY
+
+/physics/addPhysics Decay
+/physics/addPhysics EM-Photon-EPDL
+/physics/addPhysics EM-Electron-EEDL
+/physics/addPhysics EM-Positron-Standard
+/physics/addPhysics EM-HadronIon-LowE
+/physics/addPhysics EM-Muon-Standard
+
+###  B) HADRONIC PHYSICS
+
+/physics/addPhysics HadronicEl-HadronIon-LElastic
+/physics/addPhysics HadronicInel-ProtonNeutron-Bert
+/physics/addPhysics HadronicInel-Ion-LEP
+/physics/addPhysics HadronicInel-Pion-LEP
+/physics/addPhysics HadronicAtRest-MuonMinus-Capture
+
+
+##############################
+# BEAM LINE SETTINGS AND RUN #
+##############################
+
+/run/initialize
+
+###  IF YOU WANT A RANGE SHIFTER PLEASE CHANGE
+###  THE FOLLOWIG PARAMETERS
+###  SETTING FOR THE RANGE SHIFTER
+
+#/beamLine/RangeShifter/thickness 4 cm
+#/beamLine/RangeShifter/RSMat Water
+
+/run/beamOn 200
+
+
+

examples/advanced/hadrontherapy/macro/physicsHadronicBinary.mac

@@ -0,0 +1,87 @@
+############################################################################
+#
+# PHYSICS LIST:
+# ============= 
+#
+#  Decay:
+#  ------
+#    * Decay of all unstable particles
+#
+#
+#  Electromagnetic Physics
+#  -----------------------
+#    * Livermore-based models for photons, electrons
+#    * ICRU49-based models for charged hadrons, ions 
+#    * Standard models for positrons, muons 
+#
+# 
+#  Hadronic Physics (elastic)
+#  --------------------------
+#    * LEP elastic scattering model for hadrons (protons, 
+#      neutrons, pions), ions (deuterons, tritons, alphas)
+#
+#
+#  Hadronic Physics (inelastic)
+#  ----------------------------
+#    * Binary model for protons, neutrons
+#    * Fission and capture models for neutrons
+#    * LEP model for ions (deuterons, tritons, alphas)
+#    * LEP model for pions (pions+, pions-)
+#
+#
+#  Hadronic Physics (inelastic)
+#  ----------------------------
+#    * Capture model for muons-
+#
+##############################################################################
+
+
+####################
+# VERBOSITY LEVELS #
+####################
+
+/control/verbose 1
+/tracking/verbose 0
+/run/verbose 0
+/event/verbose 0
+
+
+###########
+# PHYSICS #
+###########
+
+###  A) EM PHYSICS AND DECAY
+
+/physics/addPhysics Decay
+/physics/addPhysics EM-Photon-EPDL
+/physics/addPhysics EM-Electron-EEDL
+/physics/addPhysics EM-Positron-Standard
+/physics/addPhysics EM-HadronIon-LowE
+/physics/addPhysics EM-Muon-Standard
+
+###  B) HADRONIC PHYSICS
+
+/physics/addPhysics HadronicEl-HadronIon-LElastic
+/physics/addPhysics HadronicInel-ProtonNeutron-Bin
+/physics/addPhysics HadronicInel-Ion-LEP
+/physics/addPhysics HadronicInel-Pion-LEP
+/physics/addPhysics HadronicAtRest-MuonMinus-Capture
+
+
+##############################
+# BEAM LINE SETTINGS AND RUN #
+##############################
+
+/run/initialize
+
+###  IF YOU WANT A RANGE SHIFTER PLEASE CHANGE
+###  THE FOLLOWIG PARAMETERS
+###  SETTING FOR THE RANGE SHIFTER
+
+#/beamLine/RangeShifter/thickness 4 cm
+#/beamLine/RangeShifter/RSMat Water
+
+/run/beamOn 200
+
+
+

examples/advanced/hadrontherapy/macro/physicsHadronicLEP.mac

@@ -0,0 +1,87 @@
+############################################################################
+#
+# PHYSICS LIST:
+# ============= 
+#
+#  Decay:
+#  ------
+#    * Decay of all unstable particles
+#
+#
+#  Electromagnetic Physics
+#  -----------------------
+#    * Livermore-based models for photons, electrons
+#    * ICRU49-based models for charged hadrons, ions 
+#    * Standard models for positrons, muons 
+#
+# 
+#  Hadronic Physics (elastic)
+#  --------------------------
+#    * LEP elastic scattering model for hadrons (protons, 
+#      neutrons, pions), ions (deuterons, tritons, alphas)
+#
+#
+#  Hadronic Physics (inelastic)
+#  ----------------------------
+#    * LEP model for protons, neutrons
+#    * Fission and capture models for neutrons
+#    * LEP model for ions (deuterons, tritons, alphas)
+#    * LEP model for pions (pions+, pions-)
+#
+#
+#  Hadronic Physics (inelastic)
+#  ----------------------------
+#    * Capture model for muons-
+#
+##############################################################################
+
+
+####################
+# VERBOSITY LEVELS #
+####################
+
+/control/verbose 1
+/tracking/verbose 0
+/run/verbose 0
+/event/verbose 0
+
+
+###########
+# PHYSICS #
+###########
+
+###  A) EM PHYSICS AND DECAY
+
+/physics/addPhysics Decay
+/physics/addPhysics EM-Photon-EPDL
+/physics/addPhysics EM-Electron-EEDL
+/physics/addPhysics EM-Positron-Standard
+/physics/addPhysics EM-HadronIon-LowE
+/physics/addPhysics EM-Muon-Standard
+
+###  B) HADRONIC PHYSICS
+
+/physics/addPhysics HadronicEl-HadronIon-LElastic
+/physics/addPhysics HadronicInel-ProtonNeutron-LEP
+/physics/addPhysics HadronicInel-Ion-LEP
+/physics/addPhysics HadronicInel-Pion-LEP
+/physics/addPhysics HadronicAtRest-MuonMinus-Capture
+
+
+##############################
+# BEAM LINE SETTINGS AND RUN #
+##############################
+
+/run/initialize
+
+###  IF YOU WANT A RANGE SHIFTER PLEASE CHANGE
+###  THE FOLLOWIG PARAMETERS
+###  SETTING FOR THE RANGE SHIFTER
+
+#/beamLine/RangeShifter/thickness 4 cm
+#/beamLine/RangeShifter/RSMat Water
+
+/run/beamOn 200
+
+
+

examples/advanced/hadrontherapy/macro/physicsHadronicPrecompound.mac

@@ -0,0 +1,95 @@
+############################################################################
+#
+# PHYSICS LIST:
+# ============= 
+#
+#  Decay:
+#  ------
+#    * Decay of all unstable particles
+#
+#
+#  Electromagnetic Physics
+#  -----------------------
+#    * Livermore-based models for photons, electrons
+#    * ICRU49-based models for charged hadrons, ions 
+#    * Standard models for positrons, muons 
+#
+# 
+#  Hadronic Physics (elastic)
+#  --------------------------
+#    * LEP elastic scattering model for hadrons (protons, 
+#      neutrons, pions), ions (deuterons, tritons, alphas)
+#
+#
+#  Hadronic Physics (inelastic)
+#  ----------------------------
+#    * Precompound model for protons, neutrons
+#       Options: A. Default evaporation, no Fermi break-up (activated)
+#                B. GEM evaporation, no Fermi break-up
+#                C. GEM evaporation, Fermi break-up
+#                D. Default evaporation evaporation, Fermi break-up
+#    * Fission and capture models for neutrons
+#    * LEP model for ions (deuterons, tritons, alphas)
+#    * LEP model for pions (pions+, pions-)
+#
+#
+#  Hadronic Physics (inelastic)
+#  ----------------------------
+#    * Capture model for muons-
+#
+##############################################################################
+
+
+####################
+# VERBOSITY LEVELS #
+####################
+
+/control/verbose 1
+/tracking/verbose 0
+/run/verbose 0
+/event/verbose 0
+
+
+###########
+# PHYSICS #
+###########
+
+###  A) EM PHYSICS AND DECAY
+
+/physics/addPhysics Decay
+/physics/addPhysics EM-Photon-Standard
+/physics/addPhysics EM-Electron-EEDL
+/physics/addPhysics EM-Positron-Standard
+/physics/addPhysics EM-HadronIon-LowE
+/physics/addPhysics EM-Muon-Standard
+
+###  B) HADRONIC PHYSICS
+
+/physics/addPhysics HadronicEl-HadronIon-LElastic
+/physics/addPhysics HadronicInel-ProtonNeutron-Prec
+### Other options for Precompound model (for a description see above):
+### Option B. /physics/addPhysics HadronicInel-ProtonNeutron-PrecGEM
+### Option C. /physics/addPhysics HadronicInel-ProtonNeutron-PrecGEMFermi
+### Option D. /physics/addPhysics HadronicInel-ProtonNeutron-PrecFermi
+/physics/addPhysics HadronicInel-Ion-LEP
+/physics/addPhysics HadronicInel-Pion-LEP
+/physics/addPhysics HadronicAtRest-MuonMinus-Capture
+
+
+##############################
+# BEAM LINE SETTINGS AND RUN #
+##############################
+
+/run/initialize
+
+###  IF YOU WANT A RANGE SHIFTER PLEASE CHANGE
+###  THE FOLLOWIG PARAMETERS
+###  SETTING FOR THE RANGE SHIFTER
+
+#/beamLine/RangeShifter/thickness 4 cm
+#/beamLine/RangeShifter/RSMat Water
+
+/run/beamOn 200
+
+
+

examples/advanced/hadrontherapy/macro/visualisationMacro.mac

@@ -0,0 +1,66 @@
+#----------------------------------------------------------------------------
+# MACRO FILE FOR THE VISUALIZATION OF THE
+# HADRONTHERAPY EXAMPLE USING THE OPENGL LIBRARIES
+#
+#
+# THIS MACRO ILLUSTRATES THE POSSIBILITY
+# FOR THE USER TO 
+#
+# 1. Insert a range shifter of PMMA (default is air i.e. no range shifter!);
+# 2. Define the thickness of the range shifter; 
+# 
+#
+# NOTE THAT THE MODULATOR MATERIAL IS POLTMETHYLMETHACRILATE 
+# (PMMA) FOR DEFAULT. IF ONE WANT CARRY OUT A SIMULATION WITHOUT 
+# THE MODULATOR HE/SHE MUST SET "Air" the <<ModMater>> in the
+# <<GetMater>> function of the HadrontherapyModulator.cc class
+#
+# THEN THE USER CAN RUN HIS/HER SIMULATION 
+#
+# LOOKING ON THE HELP OF THE IDLE FOR HOW TO CHANGE OTHE TOPIC FEATURES
+# OF THE BEAM LINE.
+# ADDITIONAL INFORMATIONS ON THE MESSENGER AVAILABLE CAN BE FOUND
+# INSIDE THE HADRONTHERAPY DOCUMENTATION (http://www.ge.infn.it/geant4/examples/).
+# 
+# ANYWAY SEND ME AN E-MAIL FOR ANY QUESTION: cirrone@lns.infn.it.   
+#------------------------------------------------------------------------------
+
+/control/verbose 1
+/tracking/verbose 0
+/run/verbose 0
+/event/verbose 0
+
+# SETTING FOR THE PHYSICS MODELS
+/physics/addPhysics Decay
+/physics/addPhysics EM-Photon-Standard
+/physics/addPhysics EM-Electron-Standard
+/physics/addPhysics EM-Positron-Standard
+/physics/addPhysics EM-HadronIon-Standard
+/physics/addPhysics EM-Muon-Standard
+/physics/addPhysics HadronicEl-HadronIon-LElastic
+/physics/addPhysics HadronicInel-ProtonNeutron-LEP
+/physics/addPhysics HadronicInel-Ion-LEP
+/physics/addPhysics HadronicInel-Pion-LEP
+/physics/addPhysics HadronicAtRest-MuonMinus-Capture
+
+/run/initialize
+
+# SET OF THE VISUALISATION CHARACTERISTICS
+#/vis/scene/create
+#/vis/open OGLIX
+#/vis/viewer/flush
+
+/vis/viewer/set/viewpointThetaPhi 0 180 deg
+/vis/viewer/zoom 1
+/vis/viewer/pan 10  80 cm
+/tracking/storeTrajectory 1
+/vis/scene/endOfEventAction accumulate
+#/vis/specify RODetectorLog 1
+/vis/viewer/update
+
+# SETTING FOR THE RANGE SHIFTER 
+#/beamLine/RangeShifter/thickness 0.01 mm
+#/beamLine/RangeShifter/RSMat Air
+#/tracking/verbose 1
+/vis/viewer/flush
+/run/beamOn 10000