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This commit is contained in:
Gabriele Cosmo
2016-06-09 15:16:48 +02:00
parent 75c7fd177d
commit a8e9364cea
6592 changed files with 84274 additions and 69292 deletions
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examples/advanced/human_phantom/History
+33 -1
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@@ -1,4 +1,4 @@
$Id: History,v 1.8 2006/11/30 16:06:38 guatelli Exp $
$Id: History,v 1.19 2007/06/06 19:11:20 pia Exp $
-------------------------------------------------------------------
=========================================================
@@ -18,6 +18,38 @@ committal in the CVS repository !
* Reverse chronological order (last date on top), please *
----------------------------------------------------------
06.06.2007 MGP human_phantom-V08-03-00
Minor documentation fix
May 15, 2007, S. Guatelli tag: human_phantom-V08-02-02
- Left and Right Adrenals introduced
- Left and Right Scapulae introduced
February 19, 2007, S. Guatelli tag:human_phantom-V08-02-01
March 13, 2007, S. Guatelli tag: human_phantom-V08-02-07
- VoxelBreastSensitive detector introduced
- Bug deleted in MIRDOvary
February 24, 2007, S. Guatelli tag: human_phantom-V08-02-06
- PhantomHeadBuilder introduced
February 23, 2007, S. Guatelli tag:human_phantom-V08-02-05
- Voxel Right breast introduced
February 22, 2007, S. Guatelli tag:human_phantom-V08-02-04
- Voxel Left breast introduced
February 22, 2007, S. Guatelli tag:human_phantom-V08-02-03
- Bug in MIRDLeftBreast and MIRDRightBreast corrected
February 21, 2007, S. Guatelli tag:human_phantom-V08-02-02
- G4HumanPhantomEnergyDeposit deleted
- HitCollection introduced
January 17, 2007, S. Guatelli tag:human_phantom-V08-02-00
November 30, 2006, S. Guatelli tag: human_phantom-V08-01-03
- Corrected bug in the definition of materials for MIRD phantom model.
examples/advanced/human_phantom/README
+14 -8
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@@ -1,4 +1,4 @@
$Id: README,v 1.10 2006/11/30 16:06:38 guatelli Exp $
qYY$Id: README,v 1.13 2007/06/06 19:11:20 pia Exp $
-------------------------------------------------------------------
=========================================================
@@ -102,6 +102,17 @@ output file: g4humanphantom.hbk containing
2D histogram id=50: Energy Deposit (MeV, y axis) in Body Part (x axis)
2D histogram id=100: Edep(MeV) in the parameterized breast, x= slice, y= sector
----> Macro files: example of different human phantoms
default.mac is executed by default in the simulation
adultMIRDFemale.mac: example to define a MIRD female human phantom
adultMIRDMale.mac: example to define a MIRD male human phantom
adultHead.mac: example how to define one piece of the anatomy
adultORNLFemale.mac: example to define a ORNL female human phantom
adultORNLMale.mac: example to define a ORNL male human phantom
adultMIXFemale.mac : example of MIRD human female phantom with
parameterised breast
-----> Setup
Example enviroment with the compiler gcc-3.2.3, on the Linux platform
@@ -112,7 +123,8 @@ The following environment variables need to be set:
G4LEDATA : points to low energy data base
set G4ANALYSIS_USE equal to 1 to activate the analysis
- Install the GDML package with Geant4 extensions and Xerces.
- Install the GDML package with Geant4 extensions and Xerces
.
See: http://cern.ch/gdml.
- Set the environment variable GDML_BASE to point to the area where
@@ -146,9 +158,3 @@ gdmlData/Female and gdmlData/Male, specifying in the top line the
- Run particles: run.mac
---------------------------------------------------------------------------
for comments, advices, doubts and questions please contact:
guatelli@ge.infn.it, pia@ge.infn.it
last modified: S. Guatelli, 30/11/2006
examples/advanced/human_phantom/adultFemale.mac
-78
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@@ -1,78 +0,0 @@
#
# Sets some default verbose
/control/verbose 2
#
#
#
# Initialize New Phantom
#
# Choose model: ORNL, MIRD, MIX
#
/phantom/setPhantomModel MIRD
#
# Choose Sex of Phantom: Male or Female
#
/phantom/setPhantomSex Female
#
# Insert Body Part and their Sensitivity
#
/bodypart/addBodyPart Head yes
#########
/bodypart/addBodyPart Trunk no
/bodypart/addBodyPart Legs yes
##############
#
# Skeleton System
#
/bodypart/addBodyPart LegBones yes
/bodypart/addBodyPart ArmBones yes
/bodypart/addBodyPart UpperSpine yes
/bodypart/addBodyPart MiddleLowerSpine yes
/bodypart/addBodyPart Skull yes
/bodypart/addBodyPart Pelvis yes
#
# Organs
#
/bodypart/addBodyPart Breast yes
/bodypart/addBodyPart Lungs yes
/bodypart/addBodyPart Brain yes
/bodypart/addBodyPart Heart yes
/bodypart/addBodyPart Kidneys yes
/bodypart/addBodyPart UrinaryBladder yes
/bodypart/addBodyPart Spleen yes
/bodypart/addBodyPart Pancreas no
/bodypart/addBodyPart Thyroid yes
#
# Gastrointestinal System
#
/bodypart/addBodyPart Stomach yes
/bodypart/addBodyPart UpperLargeIntestine yes
/bodypart/addBodyPart LowerLargeIntestine yes
/bodypart/addBodyPart Liver yes
#
# Genitalia
#
#/bodypart/addBodyPart Ovaries yes
#/bodypart/addBodyPart Uterus yes
#
#
# Construct your Phantom
#
/phantom/buildNewPhantom
/run/initialize
#
#
# Visualization Config
#
# Visualize Phantom with VRML
#/control/execute vrmlVis.mac
#
# Visualize Phantom with OPENGL
/control/execute openGLVis.mac
#
# Visualize Phantom with DAWN
#/control/execute dawnVis.mac
#
# Run Particles
#
/control/execute run.mac
examples/advanced/human_phantom/adultHead.mac
Executable
+71
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@@ -0,0 +1,71 @@
#
# Sets some default verbose
/control/verbose 2
#
#
#
# Initialize New Phantom
#
# Choose model: MIRDHead, ORNLHead
#
/phantom/setPhantomModel MIRDHead
#
# Choose Sex of Phantom: Male or Female
#
/phantom/setPhantomSex Male
#
# Insert Body Part and their Sensitivity
#
/bodypart/addBodyPart Head yes
#########
/bodypart/addBodyPart Trunk no
/bodypart/addBodyPart Legs yes
##############
#
# Skeleton System
#
/bodypart/addBodyPart LegBones no
/bodypart/addBodyPart ArmBones no
/bodypart/addBodyPart UpperSpine no
/bodypart/addBodyPart MiddleLowerSpine no
/bodypart/addBodyPart Skull yes
/bodypart/addBodyPart Pelvis no
#
# Organs
#
/bodypart/addBodyPart Lungs no
/bodypart/addBodyPart Brain yes
/bodypart/addBodyPart Heart no
/bodypart/addBodyPart Kidneys no
/bodypart/addBodyPart UrinaryBladder no
/bodypart/addBodyPart Spleen no
/bodypart/addBodyPart Pancreas no
/bodypart/addBodyPart Thyroid no
#
# Gastrointestinal System
#
/bodypart/addBodyPart Stomach no
/bodypart/addBodyPart UpperLargeIntestine no
/bodypart/addBodyPart LowerLargeIntestine no
/bodypart/addBodyPart Liver no
#
# Construct your Phantom
#
/phantom/buildNewPhantom
/run/initialize
#
#
# Visualization Config
#
# Visualize Phantom with VRML
#/control/execute vrmlVis.mac
#
# Visualize Phantom with OPENGL
/control/execute openGLVis.mac
#
# Visualize Phantom with DAWN
#/control/execute dawnVis.mac
#
# Run Particles
#
#/control/execute run.mac
examples/advanced/human_phantom/adultMIRDFemale.mac
Executable
+90
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@@ -0,0 +1,90 @@
# Sets some default verbose
#/control/verbose 2
#
#
#
# Initialize New Phantom
#
# Choose model: ORNLFemale, ORNLMale, MIRD, MIX, MIRDHead, ORNLHead
#
/phantom/setPhantomModel MIRD
#
# Choose Sex of Phantom: Male or Female
#
/phantom/setPhantomSex Female
#
# Insert Body Part and their Sensitivity
# The energy deposit is calculated in the organs declared sensitive
/bodypart/addBodyPart Head yes
#########
/bodypart/addBodyPart Trunk yes
/bodypart/addBodyPart LeftLeg yes
/bodypart/addBodyPart RightLeg yes
##############
#
# Skeleton System
#
/bodypart/addBodyPart LeftLegBone yes
/bodypart/addBodyPart RightLegBone yes
/bodypart/addBodyPart LeftArmBone yes
/bodypart/addBodyPart RightArmBone yes
/bodypart/addBodyPart UpperSpine yes
/bodypart/addBodyPart MiddleLowerSpine yes
/bodypart/addBodyPart Skull yes
/bodypart/addBodyPart Pelvis yes
#
# Organs
#
/bodypart/addBodyPart LeftBreast yes
/bodypart/addBodyPart RightBreast yes
/bodypart/addBodyPart LeftLung yes
/bodypart/addBodyPart RightLung yes
/bodypart/addBodyPart Brain yes
/bodypart/addBodyPart Heart no
/bodypart/addBodyPart LeftKidney yes
/bodypart/addBodyPart RightKidney yes
/bodypart/addBodyPart UrinaryBladder yes
/bodypart/addBodyPart Spleen yes
/bodypart/addBodyPart Pancreas yes
/bodypart/addBodyPart Thyroid yes
#
# Gastrointestinal System
#
/bodypart/addBodyPart Stomach yes
/bodypart/addBodyPart UpperLargeIntestine yes
/bodypart/addBodyPart LowerLargeIntestine yes
/bodypart/addBodyPart Liver no
/bodypart/addBodyPart RibCage yes
/bodypart/addBodyPart LeftScapula yes
/bodypart/addBodyPart RightScapula yes
/bodypart/addBodyPart LeftAdrenal yes
/bodypart/addBodyPart RightAdrenal yes
#
# Genitalia
#
/bodypart/addBodyPart LeftOvary yes
/bodypart/addBodyPart RightOvary yes
/bodypart/addBodyPart Uterus yes
#
#
# Construct your Phantom
#
/phantom/buildNewPhantom
/run/initialize
#
#
# Visualization Config
#
# Visualize Phantom with VRML
#/control/execute vrmlVis.mac
#
# Visualize Phantom with OPENGL
#/control/execute openGLVis.mac
#
# Visualize Phantom with DAWN
/control/execute dawnVis.mac
#
# Run Particles
#
#/control/execute run.mac
examples/advanced/human_phantom/adultMale.mac → examples/advanced/human_phantom/adultMIRDMale.mac
Regular → Executable
+2 -2
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@@ -18,7 +18,7 @@
#
/bodypart/addBodyPart Head yes
#########
/bodypart/addBodyPart Trunk no
/bodypart/addBodyPart Trunk yes
/bodypart/addBodyPart Legs yes
##############
#
@@ -68,4 +68,4 @@
#
# Run Particles
#
/control/execute run.mac
#/control/execute run.mac
examples/advanced/human_phantom/adultMIXFemale.mac
Executable
+90
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@@ -0,0 +1,90 @@
# Sets some default verbose
#/control/verbose 2
#
#
#
# Initialize New Phantom
#
# Choose model: ORNLFemale, ORNLMale, MIRD, MIX, MIRDHead, ORNLHead
#
/phantom/setPhantomModel MIX
#
# Choose Sex of Phantom: Male or Female
#
/phantom/setPhantomSex Female
#
# Insert Body Part and their Sensitivity
# The energy deposit is calculated in the organs declared sensitive
/bodypart/addBodyPart Head yes
#########
/bodypart/addBodyPart Trunk yes
/bodypart/addBodyPart LeftLeg yes
/bodypart/addBodyPart RightLeg yes
##############
#
# Skeleton System
#
/bodypart/addBodyPart LeftLegBone yes
/bodypart/addBodyPart RightLegBone yes
/bodypart/addBodyPart LeftArmBone yes
/bodypart/addBodyPart RightArmBone yes
/bodypart/addBodyPart UpperSpine yes
/bodypart/addBodyPart MiddleLowerSpine yes
/bodypart/addBodyPart Skull yes
/bodypart/addBodyPart Pelvis yes
#
# Organs
#
/bodypart/addBodyPart LeftBreast yes
/bodypart/addBodyPart RightBreast yes
/bodypart/addBodyPart LeftLung yes
/bodypart/addBodyPart RightLung yes
/bodypart/addBodyPart Brain yes
/bodypart/addBodyPart Heart no
/bodypart/addBodyPart LeftKidney yes
/bodypart/addBodyPart RightKidney yes
/bodypart/addBodyPart UrinaryBladder yes
/bodypart/addBodyPart Spleen yes
/bodypart/addBodyPart Pancreas yes
/bodypart/addBodyPart Thyroid yes
#
# Gastrointestinal System
#
/bodypart/addBodyPart Stomach yes
/bodypart/addBodyPart UpperLargeIntestine yes
/bodypart/addBodyPart LowerLargeIntestine yes
/bodypart/addBodyPart Liver no
/bodypart/addBodyPart RibCage yes
/bodypart/addBodyPart LeftScapula yes
/bodypart/addBodyPart RightScapula yes
/bodypart/addBodyPart LeftAdrenal yes
/bodypart/addBodyPart RightAdrenal yes
#
# Genitalia
#
/bodypart/addBodyPart LeftOvary yes
/bodypart/addBodyPart RightOvary yes
/bodypart/addBodyPart Uterus yes
#
#
# Construct your Phantom
#
/phantom/buildNewPhantom
/run/initialize
#
#
# Visualization Config
#
# Visualize Phantom with VRML
#/control/execute vrmlVis.mac
#
# Visualize Phantom with OPENGL
#/control/execute openGLVis.mac
#
# Visualize Phantom with DAWN
/control/execute dawnVis.mac
#
# Run Particles
#
#/control/execute run.mac
examples/advanced/human_phantom/adultORNLFemale.mac
+30 -17
View File
@@ -1,31 +1,34 @@
#
# Sets some default verbose
/control/verbose 2
#/control/verbose 2
#
#
#
# Initialize New Phantom
#
# Choose model: ORNL, MIRD, MIX
# Choose model: ORNLFemale, ORNLMale, MIRD, MIX, MIRDHead, ORNLHead
#
/phantom/setPhantomModel ORNL
/phantom/setPhantomModel ORNLFemale
#
# Choose Sex of Phantom: Male or Female
#
/phantom/setPhantomSex Female
#
# Insert Body Part and their Sensitivity
#
# The energy deposit is calculated in the organs declared sensitive
/bodypart/addBodyPart Head yes
#########
/bodypart/addBodyPart Trunk no
/bodypart/addBodyPart Legs yes
/bodypart/addBodyPart Trunk yes
/bodypart/addBodyPart LeftLeg yes
/bodypart/addBodyPart RightLeg yes
##############
#
# Skeleton System
#
/bodypart/addBodyPart LegBones yes
/bodypart/addBodyPart ArmBones yes
/bodypart/addBodyPart LeftLegBone yes
/bodypart/addBodyPart RightLegBone yes
/bodypart/addBodyPart LeftArmBone yes
/bodypart/addBodyPart RightArmBone yes
/bodypart/addBodyPart UpperSpine yes
/bodypart/addBodyPart MiddleLowerSpine yes
/bodypart/addBodyPart Skull yes
@@ -33,14 +36,17 @@
#
# Organs
#
/bodypart/addBodyPart Breast yes
/bodypart/addBodyPart Lungs yes
/bodypart/addBodyPart LeftBreast yes
/bodypart/addBodyPart RightBreast yes
/bodypart/addBodyPart LeftLung yes
/bodypart/addBodyPart RightLung yes
/bodypart/addBodyPart Brain yes
/bodypart/addBodyPart Heart yes
/bodypart/addBodyPart Kidneys yes
/bodypart/addBodyPart Heart no
/bodypart/addBodyPart LeftKidney yes
/bodypart/addBodyPart RightKidney yes
/bodypart/addBodyPart UrinaryBladder yes
/bodypart/addBodyPart Spleen yes
/bodypart/addBodyPart Pancreas no
/bodypart/addBodyPart Pancreas yes
/bodypart/addBodyPart Thyroid yes
#
# Gastrointestinal System
@@ -48,12 +54,18 @@
/bodypart/addBodyPart Stomach yes
/bodypart/addBodyPart UpperLargeIntestine yes
/bodypart/addBodyPart LowerLargeIntestine yes
/bodypart/addBodyPart Liver yes
/bodypart/addBodyPart Liver no
/bodypart/addBodyPart RibCage yes
/bodypart/addBodyPart LeftScapula yes
/bodypart/addBodyPart RightScapula yes
/bodypart/addBodyPart LeftAdrenal yes
/bodypart/addBodyPart RightAdrenal yes
#
# Genitalia
#
#/bodypart/addBodyPart Ovaries yes
#/bodypart/addBodyPart Uterus yes
/bodypart/addBodyPart LeftOvary yes
/bodypart/addBodyPart RightOvary yes
/bodypart/addBodyPart Uterus yes
#
#
# Construct your Phantom
@@ -76,3 +88,4 @@
# Run Particles
#
/control/execute run.mac
examples/advanced/human_phantom/adultORNLMale.mac
+30 -17
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@@ -1,31 +1,34 @@
#
# Sets some default verbose
/control/verbose 2
#/control/verbose 2
#
#
#
# Initialize New Phantom
#
# Choose model: ORNL, MIRD, MIX
# Choose model: ORNLFemale, ORNLMale, MIRD, MIX, MIRDHead, ORNLHead
#
/phantom/setPhantomModel ORNL
/phantom/setPhantomModel ORNLMale
#
# Choose Sex of Phantom: Male or Female
#
/phantom/setPhantomSex Male
#
# Insert Body Part and their Sensitivity
#
# The energy deposit is calculated in the organs declared sensitive
/bodypart/addBodyPart Head yes
#########
/bodypart/addBodyPart Trunk no
/bodypart/addBodyPart Legs yes
/bodypart/addBodyPart Trunk yes
/bodypart/addBodyPart LeftLeg yes
/bodypart/addBodyPart RightLeg yes
##############
#
# Skeleton System
#
/bodypart/addBodyPart LegBones yes
/bodypart/addBodyPart ArmBones yes
/bodypart/addBodyPart LeftLegBone yes
/bodypart/addBodyPart RightLegBone yes
/bodypart/addBodyPart LeftArmBone yes
/bodypart/addBodyPart RightArmBone yes
/bodypart/addBodyPart UpperSpine yes
/bodypart/addBodyPart MiddleLowerSpine yes
/bodypart/addBodyPart Skull yes
@@ -33,14 +36,17 @@
#
# Organs
#
/bodypart/addBodyPart Breast yes
/bodypart/addBodyPart Lungs yes
/bodypart/addBodyPart LeftBreast yes
/bodypart/addBodyPart RightBreast yes
/bodypart/addBodyPart LeftLung yes
/bodypart/addBodyPart RightLung yes
/bodypart/addBodyPart Brain yes
/bodypart/addBodyPart Heart yes
/bodypart/addBodyPart Kidneys yes
/bodypart/addBodyPart Heart no
/bodypart/addBodyPart LeftKidney yes
/bodypart/addBodyPart RightKidney yes
/bodypart/addBodyPart UrinaryBladder yes
/bodypart/addBodyPart Spleen yes
/bodypart/addBodyPart Pancreas no
/bodypart/addBodyPart Pancreas yes
/bodypart/addBodyPart Thyroid yes
#
# Gastrointestinal System
@@ -48,12 +54,18 @@
/bodypart/addBodyPart Stomach yes
/bodypart/addBodyPart UpperLargeIntestine yes
/bodypart/addBodyPart LowerLargeIntestine yes
/bodypart/addBodyPart Liver yes
/bodypart/addBodyPart Liver no
/bodypart/addBodyPart RibCage yes
/bodypart/addBodyPart LeftScapula yes
/bodypart/addBodyPart RightScapula yes
/bodypart/addBodyPart LeftAdrenal yes
/bodypart/addBodyPart RightAdrenal yes
#
# Genitalia
#
#/bodypart/addBodyPart Ovaries yes
#/bodypart/addBodyPart Uterus yes
/bodypart/addBodyPart LeftOvary yes
/bodypart/addBodyPart RightOvary yes
/bodypart/addBodyPart Uterus yes
#
#
# Construct your Phantom
@@ -76,3 +88,4 @@
# Run Particles
#
/control/execute run.mac
examples/advanced/human_phantom/dawnVis.mac
+2
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@@ -10,5 +10,7 @@
/tracking/verbose 0
/vis/scene/create
/vis/open DAWNFILE
/vis/drawVolume
#/vis/specify
/vis/viewer/flush
#
examples/advanced/human_phantom/default.mac
Executable
+2
View File
@@ -0,0 +1,2 @@
/control/execute adultMIXFemale.mac
examples/advanced/human_phantom/gdmlData/Female/ORNLBrain.gdml
+2 -2
View File
@@ -4,8 +4,8 @@
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="BrainPos" unit="cm" x="0.0" y="0.0" z="10.125" />
<rotation name="BrainRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="0.0" y="0.0" z="10.125" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
examples/advanced/human_phantom/gdmlData/Female/ORNLHead.gdml
+2 -2
View File
@@ -2,8 +2,8 @@
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<position name="HeadRelativePos" unit="cm" x="0" y="0" z="10.025" />
<position name="HeadPos" unit="cm" x="0" y="73.125" z="0" />
<rotation name="HeadRot" unit="degree" x="90." y="0." z="0." />
<position name="OrganPos" unit="cm" x="0" y="73.125" z="0" />
<rotation name="OrganRot" unit="degree" x="90." y="0." z="0." />
</define>
<materials>
examples/advanced/human_phantom/gdmlData/Female/ORNLLeftArmBone.gdml
+70
View File
@@ -0,0 +1,70 @@
<?xml version="1.0" encoding="UTF-8" ?>
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="OrganPos" unit="cm" x="15.87" y="0.0" z="0.0"/>
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0"/>
</define>
<materials>
<material name="sH" formula=" " Z="1."><D value="0.00009" /><atom value="1.008"/></material>
<material name="sC" formula=" " Z="6."><D value="0.00226" /><atom value="12.011"/></material>
<material name="sN" formula=" " Z="7."><D value="0.00125" /><atom value="14.006"/></material>
<material name="sO" formula=" " Z="8."><D value="0.00143" /><atom value="15.999"/></material>
<material name="sF" formula=" " Z="9."><D value="0.00169" /><atom value="18.998"/></material>
<material name="sNa" formula=" " Z="11."><D value="0.00097" /><atom value="22.989"/></material>
<material name="sMg" formula=" " Z="12."><D value="0.00174" /><atom value="24.3"/></material>
<material name="sSi" formula=" " Z="14."><D value="0.00233" /><atom value="28.086"/></material>
<material name="sP" formula=" " Z="15."><D value="0.00182" /><atom value="30.973"/></material>
<material name="sS" formula=" " Z="16."><D value="0.00207" /><atom value="32.064"/></material>
<material name="sCl" formula=" " Z="17."><D value="0.00321" /><atom value="35.453"/></material>
<material name="sK" formula=" " Z="19."><D value="0.00086" /><atom value="39.10"/></material>
<material name="sCa" formula=" " Z="20."><D value="0.00155" /><atom value="40.08"/></material>
<material name="sFe" formula=" " Z="26."><D value="0.00786" /><atom value="55.847"/></material>
<material name="sZn" formula=" " Z="30."><D value="0.00714" /><atom value="65.37"/></material>
<material name="sRb" formula=" " Z="37."><D value="0.00153" /><atom value="85.47"/></material>
<material name="sSr" formula=" " Z="38."><D value="0.00260" /><atom value="87.62"/></material>
<material name="sZr" formula=" " Z="40."><D value="0.00649" /><atom value="91.22"/></material>
<material name="sPb" formula=" " Z="82."><D value="0.01140" /><atom value="207.19"/></material>
<material formula=" " name="Skeleton">
<D value="1.4" />
<fraction n="0.07337" ref="sH" />
<fraction n="0.25475" ref="sC" />
<fraction n="0.03057" ref="sN" />
<fraction n="0.47893" ref="sO" />
<fraction n="0.00025" ref="sF" />
<fraction n="0.00326" ref="sNa" />
<fraction n="0.00112" ref="sMg" />
<fraction n="0.00002" ref="sSi" />
<fraction n="0.05095" ref="sP" />
<fraction n="0.00173" ref="sS" />
<fraction n="0.00143" ref="sCl" />
<fraction n="0.00153" ref="sK" />
<fraction n="0.10190" ref="sCa" />
<fraction n="0.00008" ref="sFe" />
<fraction n="0.00005" ref="sZn" />
<fraction n="0.00002" ref="sRb" />
<fraction n="0.00003" ref="sSr" />
<fraction n="0.00001" ref="sPb" />
</material>
</materials>
<solids>
<eltube aunit="cm" lunit="cm" name="LeftArmBone" dx="1.21" dy="2.65" dz="31.10" />
</solids>
<structure>
<volume name="LeftArmBoneVolume" >
<materialref ref="Skeleton" />
<solidref ref="LeftArmBone" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="LeftArmBoneVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Female/ORNLBreast.gdml → examples/advanced/human_phantom/gdmlData/Female/ORNLLeftBreast.gdml
+5 -18
View File
@@ -7,8 +7,8 @@
<position name="BreastUnionRelativePos" unit="cm" x="17.26" y="0" z="0" />
<position name="BreastRelativePos" unit="cm" x="8.63" y="0.0" z="-8.4854" />
<rotation name="BreastRotation" unit="degree" x="90" y="0" z="0" />
<position name="BreastPos" unit="cm" x="-8.63" y="46.87" z="8.4854" />
<rotation name="BreastRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="8.63" y="46.87" z="8.4854" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
<position name="TrunkPos" unit="cm" x="0" y="31.55" z="0" />
<rotation name="TrunkRot" unit="degree" x="90" y="0" z="0" />
</define>
@@ -113,28 +113,15 @@
<solids>
<ellipsoid aunit="cm" lunit="cm" name="OneBreast" ax="4.95" by="4.35" cz="4.15" zcut1="-4.15" zcut2="4.15" />
<eltube aunit="cm" lunit="cm" name="Trunk" dx="17.25" dy="9.80" dz="31.55"/>
<union name="BreastUnion">
<first ref="OneBreast" />
<second ref="OneBreast" />
<positionref ref="BreastUnionRelativePos" />
</union>
<subtraction name="Breast">
<first ref="BreastUnion" />
<second ref="Trunk" />
<positionref ref="BreastRelativePos" />
<rotationref ref="BreastRotation" />
</subtraction>
</solids>
<structure>
<volume name="BreastVolume" >
<volume name="LeftBreastVolume" >
<materialref ref="SoftTissue" />
<solidref ref="Breast" />
<solidref ref="OneBreast" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="BreastVolume" />
<world ref="LeftBreastVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Female/ORNLLeftKidney.gdml
+136
View File
@@ -0,0 +1,136 @@
<?xml version="1.0" encoding="UTF-8" ?>
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="SubtrKidneyRelativePos" unit="cm" x="-5.18" y="0.0" z="0.0" />
<position name="OrganPos" unit="cm" x="5.18" y="5.88" z="-2.25" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
<material name="sH" formula=" " Z="1.">
<D value="0.00009" />
<atom value="1.008"/>
</material>
<material name="sC" formula=" " Z="6.">
<D value="0.00226" />
<atom value="12.011"/>
</material>
<material name="sN" formula=" " Z="7.">
<D value="0.00125" />
<atom value="14.006"/>
</material>
<material name="sO" formula=" " Z="8.">
<D value="0.00143" />
<atom value="15.999"/>
</material>
<material name="sF" formula=" " Z="9.">
<D value="0.00169" />
<atom value="18.998"/>
</material>
<material name="sNa" formula=" " Z="11.">
<D value="0.00097" />
<atom value="22.989"/>
</material>
<material name="sMg" formula=" " Z="12.">
<D value="0.00174" />
<atom value="24.3"/>
</material>
<material name="sSi" formula=" " Z="14.">
<D value="0.00233" />
<atom value="28.086"/>
</material>
<material name="sP" formula=" " Z="15.">
<D value="0.00182" />
<atom value="30.973"/>
</material>
<material name="sS" formula=" " Z="16.">
<D value="0.00207" />
<atom value="32.064"/>
</material>
<material name="sCl" formula=" " Z="17.">
<D value="0.00321" />
<atom value="35.453"/>
</material>
<material name="sK" formula=" " Z="19.">
<D value="0.00086" />
<atom value="39.10"/>
</material>
<material name="sCa" formula=" " Z="20.">
<D value="0.00155" />
<atom value="40.08"/>
</material>
<material name="sFe" formula=" " Z="26.">
<D value="0.00786" />
<atom value="55.847"/>
</material>
<material name="sZn" formula=" " Z="30.">
<D value="0.00714" />
<atom value="65.37"/>
</material>
<material name="sRb" formula=" " Z="37.">
<D value="0.00153" />
<atom value="85.47"/>
</material>
<material name="sSr" formula=" " Z="38.">
<D value="0.00260" />
<atom value="87.62"/>
</material>
<material name="sZr" formula=" " Z="40.">
<D value="0.00649" />
<atom value="91.22"/>
</material>
<material name="sPb" formula=" " Z="82.">
<D value="0.01140" />
<atom value="207.19"/>
</material>
<material formula=" " name="SoftTissue">
<D value="1.04" />
<fraction n="0.10454" ref="sH" />
<fraction n="0.22663" ref="sC" />
<fraction n="0.02490" ref="sN" />
<fraction n="0.63525" ref="sO" />
<fraction n="0.00112" ref="sNa" />
<fraction n="0.00013" ref="sMg" />
<fraction n="0.00030" ref="sSi" />
<fraction n="0.00134" ref="sP" />
<fraction n="0.00204" ref="sS" />
<fraction n="0.00133" ref="sCl" />
<fraction n="0.00208" ref="sK" />
<fraction n="0.00024" ref="sCa" />
<fraction n="0.00005" ref="sFe" />
<fraction n="0.00003" ref="sZn" />
<fraction n="0.00001" ref="sRb" />
<fraction n="0.00001" ref="sZr" />
</material>
</materials>
<solids>
<ellipsoid aunit="cm" lunit="cm" name="OneKidney" ax="4.05" by="1.53" cz="4.96" zcut1="-4.96" zcut2="4.96" />
<box aunit="cm" lunit="cm" name="SubtrKidney" x="4.96" y="20.00" z="20.00" />
<subtraction name="LeftKidney">
<first ref="OneKidney" />
<second ref="SubtrKidney" />
<positionref ref="SubtrKidneyRelativePos" />
</subtraction>
</solids>
<structure>
<volume name="LeftKidneyVolume" >
<materialref ref="SoftTissue" />
<solidref ref="LeftKidney" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="LeftKidneyVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Female/ORNLLegs.gdml → examples/advanced/human_phantom/gdmlData/Female/ORNLLeftLeg.gdml
+5 -11
View File
@@ -4,9 +4,8 @@
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="LegsRelativePos" unit="cm" x="14.0" y="0.0" z="0.0" />
<position name="LegsPos" unit="cm" x="-7.01" y="-39.1" z="0" />
<rotation name="LegsRot" unit="degree" x="90" y="0" z="0" />
<position name="OrganPos" unit="cm" x="7.01" y="-39.1" z="0" />
<rotation name="OrganRot" unit="degree" x="90" y="0" z="0" />
</define>
<materials>
@@ -109,20 +108,15 @@
<solids>
<tube aunit="radian" lunit="cm" name="OneLeg" z="78.0" rmax="7.0" deltaphi="TWOPI"/>
<union name="Legs">
<first ref="OneLeg" />
<second ref="OneLeg" />
<positionref ref="LegsRelativePos" />
</union>
</solids>
<structure>
<volume name="LegsVolume" >
<volume name="LeftLegVolume" >
<materialref ref="SoftTissue" />
<solidref ref="Legs" />
<solidref ref="OneLeg" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="LegsVolume" />
<world ref="LeftLegVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Female/ORNLLeftLegBone.gdml
+123
View File
@@ -0,0 +1,123 @@
<?xml version="1.0" encoding="UTF-8" ?>
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="OrganPos" unit="cm" x="0.0" y="0.0" z="0.0" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
<material name="sH" formula=" " Z="1.">
<D value="0.00009" />
<atom value="1.008"/>
</material>
<material name="sC" formula=" " Z="6.">
<D value="0.00226" />
<atom value="12.011"/>
</material>
<material name="sN" formula=" " Z="7.">
<D value="0.00125" />
<atom value="14.006"/>
</material>
<material name="sO" formula=" " Z="8.">
<D value="0.00143" />
<atom value="15.999"/>
</material>
<material name="sF" formula=" " Z="9.">
<D value="0.00169" />
<atom value="18.998"/>
</material>
<material name="sNa" formula=" " Z="11.">
<D value="0.00097" />
<atom value="22.989"/>
</material>
<material name="sMg" formula=" " Z="12.">
<D value="0.00174" />
<atom value="24.3"/>
</material>
<material name="sSi" formula=" " Z="14.">
<D value="0.00233" />
<atom value="28.086"/>
</material>
<material name="sP" formula=" " Z="15.">
<D value="0.00182" />
<atom value="30.973"/>
</material>
<material name="sS" formula=" " Z="16.">
<D value="0.00207" />
<atom value="32.064"/>
</material>
<material name="sCl" formula=" " Z="17.">
<D value="0.00321" />
<atom value="35.453"/>
</material>
<material name="sK" formula=" " Z="19.">
<D value="0.00086" />
<atom value="39.10"/>
</material>
<material name="sCa" formula=" " Z="20.">
<D value="0.00155" />
<atom value="40.08"/>
</material>
<material name="sFe" formula=" " Z="26.">
<D value="0.00786" />
<atom value="55.847"/>
</material>
<material name="sZn" formula=" " Z="30.">
<D value="0.00714" />
<atom value="65.37"/>
</material>
<material name="sRb" formula=" " Z="37.">
<D value="0.00153" />
<atom value="85.47"/>
</material>
<material name="sSr" formula=" " Z="38.">
<D value="0.00260" />
<atom value="87.62"/>
</material>
<material name="sZr" formula=" " Z="40.">
<D value="0.00649" />
<atom value="91.22"/>
</material>
<material name="sPb" formula=" " Z="82.">
<D value="0.01140" />
<atom value="207.19"/>
</material>
<material formula=" " name="Skeleton">
<D value="1.4" />
<fraction n="0.07337" ref="sH" />
<fraction n="0.25475" ref="sC" />
<fraction n="0.03057" ref="sN" />
<fraction n="0.47893" ref="sO" />
<fraction n="0.00025" ref="sF" />
<fraction n="0.00326" ref="sNa" />
<fraction n="0.00112" ref="sMg" />
<fraction n="0.00002" ref="sSi" />
<fraction n="0.05095" ref="sP" />
<fraction n="0.00173" ref="sS" />
<fraction n="0.00143" ref="sCl" />
<fraction n="0.00153" ref="sK" />
<fraction n="0.10190" ref="sCa" />
<fraction n="0.00008" ref="sFe" />
<fraction n="0.00005" ref="sZn" />
<fraction n="0.00002" ref="sRb" />
<fraction n="0.00003" ref="sSr" />
<fraction n="0.00001" ref="sPb" />
</material>
</materials>
<solids>
<eltube aunit="cm" lunit="cm" name="OneLegBone" dx="2.0" dy="1.0" dz="39.00" />
<structure>
<volume name="LeftLegBoneVolume" >
<materialref ref="Skeleton" />
<solidref ref="OneLegBone" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="LeftLegBoneVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Female/ORNLLung.gdml → examples/advanced/human_phantom/gdmlData/Female/ORNLLeftLung.gdml
+6 -12
View File
@@ -4,11 +4,10 @@
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="LungRelativePos" unit="cm" x="14.66" y="0.0" z="0.0" />
<position name="SubtrLungRelativePos" unit="cm" x="7.50" y="-4.0" z="0.0" />
<rotation name="SubtrLungRelativeRot" unit="degree" x="0" y="0" z="0" />
<position name="LungPos" unit="cm" x="-7.33" y="0.0" z="7.66" />
<rotation name="LungRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="7.33" y="0.0" z="7.66" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="180." />
</define>
<materials>
@@ -113,13 +112,8 @@
<ellipsoid aunit="cm" lunit="cm" name="OneLung" ax="4.09" by="6.98" cz="20.55" zcut1="0.0" zcut2="20.55" />
<ellipsoid aunit="cm" lunit="cm" name="SubtrLung" ax="5.0" by="7.0" cz="20.55" />
<union name="Lung1">
<subtraction name="LeftLung">
<first ref="OneLung" />
<second ref="OneLung" />
<positionref ref="LungRelativePos" />
</union>
<subtraction name="Lung">
<first ref="Lung1" />
<second ref="SubtrLung" />
<positionref ref="SubtrLungRelativePos" />
<rotationref ref="SubtrLungRelativeRot" />
@@ -128,12 +122,12 @@
</solids>
<structure>
<volume name="LungVolume" >
<volume name="LeftLungVolume" >
<materialref ref="LungMat" />
<solidref ref="Lung" />
<solidref ref="LeftLung" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="LungVolume" />
<world ref="LeftLungVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Female/ORNLLeftOvary.gdml
+122
View File
@@ -0,0 +1,122 @@
<?xml version="1.0" encoding="UTF-8" ?>
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="OrganPos" unit="cm" x="5.18" y="0.0" z="-18.03" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
<material name="sH" formula=" " Z="1.">
<D value="0.00009" />
<atom value="1.008"/>
</material>
<material name="sC" formula=" " Z="6.">
<D value="0.00226" />
<atom value="12.011"/>
</material>
<material name="sN" formula=" " Z="7.">
<D value="0.00125" />
<atom value="14.006"/>
</material>
<material name="sO" formula=" " Z="8.">
<D value="0.00143" />
<atom value="15.999"/>
</material>
<material name="sF" formula=" " Z="9.">
<D value="0.00169" />
<atom value="18.998"/>
</material>
<material name="sNa" formula=" " Z="11.">
<D value="0.00097" />
<atom value="22.989"/>
</material>
<material name="sMg" formula=" " Z="12.">
<D value="0.00174" />
<atom value="24.3"/>
</material>
<material name="sSi" formula=" " Z="14.">
<D value="0.00233" />
<atom value="28.086"/>
</material>
<material name="sP" formula=" " Z="15.">
<D value="0.00182" />
<atom value="30.973"/>
</material>
<material name="sS" formula=" " Z="16.">
<D value="0.00207" />
<atom value="32.064"/>
</material>
<material name="sCl" formula=" " Z="17.">
<D value="0.00321" />
<atom value="35.453"/>
</material>
<material name="sK" formula=" " Z="19.">
<D value="0.00086" />
<atom value="39.10"/>
</material>
<material name="sCa" formula=" " Z="20.">
<D value="0.00155" />
<atom value="40.08"/>
</material>
<material name="sFe" formula=" " Z="26.">
<D value="0.00786" />
<atom value="55.847"/>
</material>
<material name="sZn" formula=" " Z="30.">
<D value="0.00714" />
<atom value="65.37"/>
</material>
<material name="sRb" formula=" " Z="37.">
<D value="0.00153" />
<atom value="85.47"/>
</material>
<material name="sSr" formula=" " Z="38.">
<D value="0.00260" />
<atom value="87.62"/>
</material>
<material name="sZr" formula=" " Z="40.">
<D value="0.00649" />
<atom value="91.22"/>
</material>
<material name="sPb" formula=" " Z="82.">
<D value="0.01140" />
<atom value="207.19"/>
</material>
<material formula=" " name="SoftTissue">
<D value="1.04" />
<fraction n="0.10454" ref="sH" />
<fraction n="0.22663" ref="sC" />
<fraction n="0.02490" ref="sN" />
<fraction n="0.63525" ref="sO" />
<fraction n="0.00112" ref="sNa" />
<fraction n="0.00013" ref="sMg" />
<fraction n="0.00030" ref="sSi" />
<fraction n="0.00134" ref="sP" />
<fraction n="0.00204" ref="sS" />
<fraction n="0.00133" ref="sCl" />
<fraction n="0.00208" ref="sK" />
<fraction n="0.00024" ref="sCa" />
<fraction n="0.00005" ref="sFe" />
<fraction n="0.00003" ref="sZn" />
<fraction n="0.00001" ref="sRb" />
<fraction n="0.00001" ref="sZr" />
</material>
</materials>
<solids>
<ellipsoid aunit="cm" lunit="cm" name="OneOvary" ax="1.17" by="0.58" cz="1.80" zcut1="-1.80" zcut2="1.80" />
</solids>
<structure>
<volume name="LeftOvaryVolume" >
<materialref ref="SoftTissue" />
<solidref ref="OneOvary" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="LeftOvaryVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Female/ORNLLowerLargeIntestine.gdml
+2 -2
View File
@@ -9,8 +9,8 @@
<rotation name="SigmoidColonLowerLargeIntestineRelativeRot" unit="degree" x="0" y="180" z="90" />
<position name="DescendingColonLowerLargeIntestineRelativePos" unit="cm" x="-5.16" y="0.0" z="-6.885" />
<rotation name="DescendingColonLowerLargeIntestineRelativeRot" unit="degree" x="-90" y="0" z="0" />
<position name="LowerLargeIntestinePos" unit="cm" x="7.86" y="-2.31" z="-16.79" />
<rotation name="LowerLargeIntestineRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="7.86" y="-2.31" z="-16.79" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
examples/advanced/human_phantom/gdmlData/Female/ORNLMiddleLowerSpine.gdml
+2 -2
View File
@@ -6,8 +6,8 @@
<constant name="HALFPI" value="0.5*pi"/>
<position name="SpineMidLowRelativePos" unit="cm" x="0.0" y="0.0" z="-21.56" />
<position name="MiddleLowerSpinePos" unit="cm" x="0.0" y="5.39" z="15.905" />
<rotation name="MiddleLowerSpineRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="0.0" y="5.39" z="15.905" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
examples/advanced/human_phantom/gdmlData/Female/ORNLPancreas.gdml
+2 -2
View File
@@ -6,8 +6,8 @@
<constant name="HALFPI" value="0.5*pi"/>
<position name="FirstSubtrPancreasRelativePos" unit="cm" x="-2.87" y="0.0" z="-8.685" />
<position name="PancreasPos" unit="cm" x="-0.72" y="0.0" z="1.8" />
<rotation name="PancreasRot" unit="degree" x="0" y="90" z="0" />
<position name="OrganPos" unit="cm" x="-0.72" y="0.0" z="1.8" />
<rotation name="OrganRot" unit="degree" x="0" y="90" z="0" />
</define>
<materials>
examples/advanced/human_phantom/gdmlData/Female/ORNLPelvis.gdml
+2 -2
View File
@@ -8,8 +8,8 @@
<position name="PelvisRelativePos" unit="cm" x="0.0" y="0.0" z="0.0" />
<position name="FirstSubtrPelvisRelativePos" unit="cm" x="0.0" y="14.70" z="-8.21" />
<position name="SecondSubtrPelvisRelativePos" unit="cm" x="0.0" y="-11.76" z="0.0" />
<position name="PelvisPos" unit="cm" x="0.0" y="-2.94" z="-21.635" />
<rotation name="PelvisRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="0.0" y="-2.94" z="-21.635" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
examples/advanced/human_phantom/gdmlData/Female/ORNLRightArmBone.gdml
+70
View File
@@ -0,0 +1,70 @@
<?xml version="1.0" encoding="UTF-8" ?>
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="OrganPos" unit="cm" x="-15.87" y="0.0" z="0.0" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
<material name="sH" formula=" " Z="1."><D value="0.00009" /><atom value="1.008"/></material>
<material name="sC" formula=" " Z="6."><D value="0.00226" /><atom value="12.011"/></material>
<material name="sN" formula=" " Z="7."><D value="0.00125" /><atom value="14.006"/></material>
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<material name="sF" formula=" " Z="9."><D value="0.00169" /><atom value="18.998"/></material>
<material name="sNa" formula=" " Z="11."><D value="0.00097" /><atom value="22.989"/></material>
<material name="sMg" formula=" " Z="12."><D value="0.00174" /><atom value="24.3"/></material>
<material name="sSi" formula=" " Z="14."><D value="0.00233" /><atom value="28.086"/></material>
<material name="sP" formula=" " Z="15."><D value="0.00182" /><atom value="30.973"/></material>
<material name="sS" formula=" " Z="16."><D value="0.00207" /><atom value="32.064"/></material>
<material name="sCl" formula=" " Z="17."><D value="0.00321" /><atom value="35.453"/></material>
<material name="sK" formula=" " Z="19."><D value="0.00086" /><atom value="39.10"/></material>
<material name="sCa" formula=" " Z="20."><D value="0.00155" /><atom value="40.08"/></material>
<material name="sFe" formula=" " Z="26."><D value="0.00786" /><atom value="55.847"/></material>
<material name="sZn" formula=" " Z="30."><D value="0.00714" /><atom value="65.37"/></material>
<material name="sRb" formula=" " Z="37."><D value="0.00153" /><atom value="85.47"/></material>
<material name="sSr" formula=" " Z="38."><D value="0.00260" /><atom value="87.62"/></material>
<material name="sZr" formula=" " Z="40."><D value="0.00649" /><atom value="91.22"/></material>
<material name="sPb" formula=" " Z="82."><D value="0.01140" /><atom value="207.19"/></material>
<material formula=" " name="Skeleton">
<D value="1.4" />
<fraction n="0.07337" ref="sH" />
<fraction n="0.25475" ref="sC" />
<fraction n="0.03057" ref="sN" />
<fraction n="0.47893" ref="sO" />
<fraction n="0.00025" ref="sF" />
<fraction n="0.00326" ref="sNa" />
<fraction n="0.00112" ref="sMg" />
<fraction n="0.00002" ref="sSi" />
<fraction n="0.05095" ref="sP" />
<fraction n="0.00173" ref="sS" />
<fraction n="0.00143" ref="sCl" />
<fraction n="0.00153" ref="sK" />
<fraction n="0.10190" ref="sCa" />
<fraction n="0.00008" ref="sFe" />
<fraction n="0.00005" ref="sZn" />
<fraction n="0.00002" ref="sRb" />
<fraction n="0.00003" ref="sSr" />
<fraction n="0.00001" ref="sPb" />
</material>
</materials>
<solids>
<eltube aunit="cm" lunit="cm" name="RightArmBone" dx="1.21" dy="2.65" dz="31.10" />
</solids>
<structure>
<volume name="RightArmBoneVolume" >
<materialref ref="Skeleton" />
<solidref ref="RightArmBone" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="RightArmBoneVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Female/ORNLRightBreast.gdml
+124
View File
@@ -0,0 +1,124 @@
<?xml version="1.0" encoding="UTF-8" ?>
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="BreastUnionRelativePos" unit="cm" x="17.26" y="0" z="0" />
<position name="BreastRelativePos" unit="cm" x="8.63" y="0.0" z="-8.4854" />
<rotation name="BreastRotation" unit="degree" x="90" y="0" z="0" />
<position name="OrganPos" unit="cm" x="-8.63" y="46.87" z="8.4854" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
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<D value="0.00009" />
<atom value="1.008"/>
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<material name="sC" formula=" " Z="6.">
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<D value="0.00169" />
<atom value="18.998"/>
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<material name="sNa" formula=" " Z="11.">
<D value="0.00097" />
<atom value="22.989"/>
</material>
<material name="sMg" formula=" " Z="12.">
<D value="0.00174" />
<atom value="24.3"/>
</material>
<material name="sSi" formula=" " Z="14.">
<D value="0.00233" />
<atom value="28.086"/>
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<material name="sP" formula=" " Z="15.">
<D value="0.00182" />
<atom value="30.973"/>
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<material name="sS" formula=" " Z="16.">
<D value="0.00207" />
<atom value="32.064"/>
</material>
<material name="sCl" formula=" " Z="17.">
<D value="0.00321" />
<atom value="35.453"/>
</material>
<material name="sK" formula=" " Z="19.">
<D value="0.00086" />
<atom value="39.10"/>
</material>
<material name="sCa" formula=" " Z="20.">
<D value="0.00155" />
<atom value="40.08"/>
</material>
<material name="sFe" formula=" " Z="26.">
<D value="0.00786" />
<atom value="55.847"/>
</material>
<material name="sZn" formula=" " Z="30.">
<D value="0.00714" />
<atom value="65.37"/>
</material>
<material name="sRb" formula=" " Z="37.">
<D value="0.00153" />
<atom value="85.47"/>
</material>
<material name="sSr" formula=" " Z="38.">
<D value="0.00260" />
<atom value="87.62"/>
</material>
<material name="sZr" formula=" " Z="40.">
<D value="0.00649" />
<atom value="91.22"/>
</material>
<material name="sPb" formula=" " Z="82.">
<D value="0.01140" />
<atom value="207.19"/>
</material>
<material formula=" " name="SoftTissue">
<D value="1.04" />
<fraction n="0.10454" ref="sH" />
<fraction n="0.22663" ref="sC" />
<fraction n="0.02490" ref="sN" />
<fraction n="0.63525" ref="sO" />
<fraction n="0.00112" ref="sNa" />
<fraction n="0.00013" ref="sMg" />
<fraction n="0.00030" ref="sSi" />
<fraction n="0.00134" ref="sP" />
<fraction n="0.00204" ref="sS" />
<fraction n="0.00133" ref="sCl" />
<fraction n="0.00208" ref="sK" />
<fraction n="0.00024" ref="sCa" />
<fraction n="0.00005" ref="sFe" />
<fraction n="0.00003" ref="sZn" />
<fraction n="0.00001" ref="sRb" />
<fraction n="0.00001" ref="sZr" />
</material>
</materials>
<solids>
<ellipsoid aunit="cm" lunit="cm" name="OneBreast" ax="4.95" by="4.35" cz="4.15" zcut1="-4.15" zcut2="4.15" />
</solids>
<structure>
<volume name="RightBreastVolume" >
<materialref ref="SoftTissue" />
<solidref ref="OneBreast" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="RightBreastVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Female/ORNLKidney.gdml → examples/advanced/human_phantom/gdmlData/Female/ORNLRightKidney.gdml
+6 -12
View File
@@ -4,10 +4,9 @@
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="KidneyRelativePos" unit="cm" x="10.36" y="0.0" z="0.0" />
<position name="SubtrKidneyRelativePos" unit="cm" x="5.18" y="0.0" z="0.0" />
<position name="KidneyPos" unit="cm" x="-5.18" y="5.88" z="-2.25" />
<rotation name="KidneyRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="-5.18" y="5.88" z="-2.25" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
@@ -115,13 +114,8 @@
<ellipsoid aunit="cm" lunit="cm" name="OneKidney" ax="4.05" by="1.53" cz="4.96" zcut1="-4.96" zcut2="4.96" />
<box aunit="cm" lunit="cm" name="SubtrKidney" x="4.96" y="20.00" z="20.00" />
<union name="UnionKidney">
<subtraction name="RightKidney">
<first ref="OneKidney" />
<second ref="OneKidney" />
<positionref ref="KidneyRelativePos" />
</union>
<subtraction name="Kidney">
<first ref="UnionKidney" />
<second ref="SubtrKidney" />
<positionref ref="SubtrKidneyRelativePos" />
</subtraction>
@@ -130,13 +124,13 @@
<structure>
<volume name="KidneyVolume" >
<volume name="RightKidneyVolume" >
<materialref ref="SoftTissue" />
<solidref ref="Kidney" />
<solidref ref="RightKidney" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="KidneyVolume" />
<world ref="RightKidneyVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Female/ORNLRightLeg.gdml
+122
View File
@@ -0,0 +1,122 @@
<?xml version="1.0" encoding="UTF-8" ?>
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="OrganPos" unit="cm" x="-7.01" y="-39.1" z="0" />
<rotation name="OrganRot" unit="degree" x="90" y="0" z="0" />
</define>
<materials>
<material name="sH" formula=" " Z="1.">
<D value="0.00009" />
<atom value="1.008"/>
</material>
<material name="sC" formula=" " Z="6.">
<D value="0.00226" />
<atom value="12.011"/>
</material>
<material name="sN" formula=" " Z="7.">
<D value="0.00125" />
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</material>
<material name="sO" formula=" " Z="8.">
<D value="0.00143" />
<atom value="15.999"/>
</material>
<material name="sF" formula=" " Z="9.">
<D value="0.00169" />
<atom value="18.998"/>
</material>
<material name="sNa" formula=" " Z="11.">
<D value="0.00097" />
<atom value="22.989"/>
</material>
<material name="sMg" formula=" " Z="12.">
<D value="0.00174" />
<atom value="24.3"/>
</material>
<material name="sSi" formula=" " Z="14.">
<D value="0.00233" />
<atom value="28.086"/>
</material>
<material name="sP" formula=" " Z="15.">
<D value="0.00182" />
<atom value="30.973"/>
</material>
<material name="sS" formula=" " Z="16.">
<D value="0.00207" />
<atom value="32.064"/>
</material>
<material name="sCl" formula=" " Z="17.">
<D value="0.00321" />
<atom value="35.453"/>
</material>
<material name="sK" formula=" " Z="19.">
<D value="0.00086" />
<atom value="39.10"/>
</material>
<material name="sCa" formula=" " Z="20.">
<D value="0.00155" />
<atom value="40.08"/>
</material>
<material name="sFe" formula=" " Z="26.">
<D value="0.00786" />
<atom value="55.847"/>
</material>
<material name="sZn" formula=" " Z="30.">
<D value="0.00714" />
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</material>
<material name="sRb" formula=" " Z="37.">
<D value="0.00153" />
<atom value="85.47"/>
</material>
<material name="sSr" formula=" " Z="38.">
<D value="0.00260" />
<atom value="87.62"/>
</material>
<material name="sZr" formula=" " Z="40.">
<D value="0.00649" />
<atom value="91.22"/>
</material>
<material name="sPb" formula=" " Z="82.">
<D value="0.01140" />
<atom value="207.19"/>
</material>
<material formula=" " name="SoftTissue">
<D value="1.04" />
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</materials>
<solids>
<tube aunit="radian" lunit="cm" name="OneLeg" z="78.0" rmax="7.0" deltaphi="TWOPI"/>
</solids>
<structure>
<volume name="RightLegVolume" >
<materialref ref="SoftTissue" />
<solidref ref="OneLeg" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="RightLegVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Female/ORNLRightLegBone.gdml
+125
View File
@@ -0,0 +1,125 @@
<?xml version="1.0" encoding="UTF-8" ?>
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="OrganPos" unit="cm" x="0.0" y="0.0" z="0.0" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
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<D value="0.00009" />
<atom value="1.008"/>
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</solids>
<structure>
<volume name="RightLegBoneVolume" >
<materialref ref="Skeleton" />
<solidref ref="OneLegBone" />
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<setup name="Default" version="1.0" >
<world ref="RightLegBoneVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Female/ORNLRightLung.gdml
+132
View File
@@ -0,0 +1,132 @@
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<define>
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<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
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<rotation name="SubtrLungRelativeRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="-7.33" y="0.0" z="7.66" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="-180." />
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<first ref="OneLung" />
<second ref="SubtrLung" />
<positionref ref="SubtrLungRelativePos" />
<rotationref ref="SubtrLungRelativeRot" />
</subtraction>
</solids>
<structure>
<volume name="RightLungVolume" >
<materialref ref="LungMat" />
<solidref ref="RightLung" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="RightLungVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Female/ORNLOvary.gdml → examples/advanced/human_phantom/gdmlData/Female/ORNLRightOvary.gdml
+5 -13
View File
@@ -4,9 +4,8 @@
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="OvaryRelativePos" unit="cm" x="10.36" y="0.0" z="0.0" />
<position name="OvaryPos" unit="cm" x="-5.18" y="0.0" z="-18.03" />
<rotation name="OvaryRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="-5.18" y="0.0" z="-18.03" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
@@ -110,22 +109,15 @@
<solids>
<ellipsoid aunit="cm" lunit="cm" name="OneOvary" ax="1.17" by="0.58" cz="1.80" zcut1="-1.80" zcut2="1.80" />
<union name="Ovary">
<first ref="OneOvary" />
<second ref="OneOvary" />
<positionref ref="OvaryRelativePos" />
</union>
</solids>
<structure>
<volume name="OvaryVolume" >
<volume name="RightOvaryVolume" >
<materialref ref="SoftTissue" />
<solidref ref="Ovary" />
<solidref ref="OneOvary" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="OvaryVolume" />
<world ref="RightOvaryVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Female/ORNLSkull.gdml
+2 -2
View File
@@ -8,8 +8,8 @@
<position name="FirstSubtrFacialSkeletonRelativePos" unit="cm" x="0.0" y="0.0" z="0.0" />
<position name="SecondSubtrFacialSkeletonRelativePos" unit="cm" x="0.0" y="8.91" z="0.0" />
<position name="SkullRelativePos" unit="cm" x="0" y="0.0" z="5.13" />
<position name="SkullPos" unit="cm" x="0.0" y="0.0" z="4.795" />
<rotation name="SkullRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="0.0" y="0.0" z="4.795" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
examples/advanced/human_phantom/gdmlData/Female/ORNLSpleen.gdml
+2 -2
View File
@@ -4,8 +4,8 @@
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="SpleenPos" unit="cm" x="9.49" y="2.94" z="1.8" />
<rotation name="SpleenRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="9.49" y="2.94" z="1.8" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
examples/advanced/human_phantom/gdmlData/Female/ORNLStomach.gdml
+2 -2
View File
@@ -4,8 +4,8 @@
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="StomachPos" unit="cm" x="6.90" y="-3.92" z="0" />
<rotation name="StomachRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="6.90" y="-3.92" z="0" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
examples/advanced/human_phantom/gdmlData/Female/ORNLTrunk.gdml
+4 -4
View File
@@ -4,8 +4,8 @@
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="TrunkPos" unit="cm" x="0" y="31.55" z="0" />
<rotation name="TrunkRot" unit="degree" x="90" y="0" z="0" />
<position name="OrganPos" unit="cm" x="0" y="31.55" z="0" />
<rotation name="OrganRot" unit="degree" x="90" y="0" z="0" />
</define>
<materials>
@@ -107,13 +107,13 @@
</materials>
<solids>
<eltube aunit="cm" lunit="cm" name="Trunk" dx="17.25" dy="9.80" dz="31.55"/>
<eltube aunit="cm" lunit="cm" name="Organ" dx="17.25" dy="9.80" dz="31.55"/>
</solids>
<structure>
<volume name="TrunkVolume" >
<materialref ref="SoftTissue" />
<solidref ref="Trunk" />
<solidref ref="Organ" />
</volume>
</structure>
<setup name="Default" version="1.0" >
examples/advanced/human_phantom/gdmlData/Female/ORNLUpperLargeIntestine.gdml
+2 -2
View File
@@ -7,8 +7,8 @@
<position name="AscendingTransverseUpperLargeIntestineRelativePos" unit="cm" x="7.2" y="0.0" z="5.65" />
<rotation name="AscendingTransverseUpperLargeIntestineRelativeRot" unit="degree" x="90" y="0" z="90" />
<position name="UpperLargeIntestinePos" unit="cm" x="-7.33" y="-2.31" z="-14.22" />
<rotation name="UpperLargeIntestineRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="-7.33" y="-2.31" z="-14.22" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
examples/advanced/human_phantom/gdmlData/Female/ORNLUpperSpine.gdml
+2 -2
View File
@@ -5,8 +5,8 @@
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="UpperSpinePos" unit="cm" x="0.0" y="5.39" z="-3.26" />
<rotation name="UpperSpineRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="0.0" y="5.39" z="-3.26" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
examples/advanced/human_phantom/gdmlData/Female/ORNLUrinaryBladder.gdml
+2 -2
View File
@@ -5,8 +5,8 @@
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="UrinaryBladderPos" unit="cm" x="0" y="-4.41" z="-24.34" />
<rotation name="UrinaryBladderRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="0" y="-4.41" z="-24.34" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
examples/advanced/human_phantom/gdmlData/Male/MIRDArmBone.gdml
+1 -1
View File
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8" ?>
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/local/GDML_2_8_0/src/GDMLSchema/gdml.xsd" >
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
examples/advanced/human_phantom/gdmlData/Male/MIRDBrain.gdml
+1 -1
View File
@@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8" ?>
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/local/GDML_2_8_0/src/GDMLSchema/gdml.xsd" >
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
examples/advanced/human_phantom/gdmlData/Male/MIRDLowerLargeIntestine.gdml
+2
View File
@@ -57,7 +57,9 @@
<solids>
<eltube aunit="cm" lunit="cm" name="DescendingColonLowerLargeIntestine" dx="1.62" dy="2.09" dz="6.885" />
<torus aunit="radian" lunit="cm" name="SigmoidColonUpLowerLargeIntestine" rmin="0.0" rmax="1.62" rtor="5.16" startphi="0" deltaphi="HALFPI" />
<torus aunit="radian" lunit="cm" name="SigmoidColonDownLowerLargeIntestine" rmin="0.0" rmax="1.62" rtor="2.70" startphi="0" deltaphi="HALFPI" />
<union name="SigmoidColonLowerLargeIntestine">
examples/advanced/human_phantom/gdmlData/Male/MIRDSkull.gdml
+6
View File
@@ -59,25 +59,31 @@
<solids>
<ellipsoid aunit="cm" lunit="cm" name="CraniumOut" ax="7.68" by="9.67" cz="6.83" zcut1="-6.83" zcut2="6.83" />
<ellipsoid aunit="cm" lunit="cm" name="CraniumIn" ax="7.18" by="9.17" cz="6.33" zcut1="-6.33" zcut2="6.33" />
<eltube aunit="cm" lunit="cm" name="FacialSkeletonOut" dx="6.92" dy="8.91" dz="5.13" />
<eltube aunit="cm" lunit="cm" name="FacialSkeletonIn" dx="5.82" dy="7.81" dz="6.13" />
<box aunit="cm" lunit="cm" name="SubtrFacialSkeleton" x="14.84" y="18.82" z="11.26" />
<subtraction name="FirstFacialSkeleton">
<first ref="FacialSkeletonOut" />
<second ref="FacialSkeletonIn" />
<positionref ref="FirstSubtrFacialSkeletonRelativePos" />
</subtraction>
<subtraction name="FacialSkeleton">
<first ref="FirstFacialSkeleton" />
<second ref="SubtrFacialSkeleton" />
<positionref ref="SecondSubtrFacialSkeletonRelativePos" />
</subtraction>
<subtraction name="Cranium">
<first ref="CraniumOut" />
<second ref="CraniumIn" />
<positionref ref="CraniumRelativePos" />
</subtraction>
<union name="Skull">
<first ref="FacialSkeleton" />
<second ref="Cranium" />
examples/advanced/human_phantom/gdmlData/Male/ORNLArmBone.gdml
+2 -1
View File
@@ -1,5 +1,6 @@
<?xml version="1.0" encoding="UTF-8" ?>
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
examples/advanced/human_phantom/gdmlData/Male/ORNLBrain.gdml
+2 -2
View File
@@ -4,8 +4,8 @@
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="BrainPos" unit="cm" x="0.0" y="0.0" z="10.125" />
<rotation name="BrainRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="0.0" y="0.0" z="10.125" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
examples/advanced/human_phantom/gdmlData/Male/ORNLHead.gdml
+2 -2
View File
@@ -2,8 +2,8 @@
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<position name="HeadRelativePos" unit="cm" x="0" y="0" z="10.025" />
<position name="HeadPos" unit="cm" x="0" y="73.125" z="0" />
<rotation name="HeadRot" unit="degree" x="90." y="0." z="0." />
<position name="OrganPos" unit="cm" x="0" y="73.125" z="0" />
<rotation name="OrganRot" unit="degree" x="90." y="0." z="0." />
</define>
<materials>
examples/advanced/human_phantom/gdmlData/Male/ORNLLeftArmBone.gdml
+70
View File
@@ -0,0 +1,70 @@
<?xml version="1.0" encoding="UTF-8" ?>
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="OrganPos" unit="cm" x="15.87" y="0.0" z="0.0"/>
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0"/>
</define>
<materials>
<material name="sH" formula=" " Z="1."><D value="0.00009" /><atom value="1.008"/></material>
<material name="sC" formula=" " Z="6."><D value="0.00226" /><atom value="12.011"/></material>
<material name="sN" formula=" " Z="7."><D value="0.00125" /><atom value="14.006"/></material>
<material name="sO" formula=" " Z="8."><D value="0.00143" /><atom value="15.999"/></material>
<material name="sF" formula=" " Z="9."><D value="0.00169" /><atom value="18.998"/></material>
<material name="sNa" formula=" " Z="11."><D value="0.00097" /><atom value="22.989"/></material>
<material name="sMg" formula=" " Z="12."><D value="0.00174" /><atom value="24.3"/></material>
<material name="sSi" formula=" " Z="14."><D value="0.00233" /><atom value="28.086"/></material>
<material name="sP" formula=" " Z="15."><D value="0.00182" /><atom value="30.973"/></material>
<material name="sS" formula=" " Z="16."><D value="0.00207" /><atom value="32.064"/></material>
<material name="sCl" formula=" " Z="17."><D value="0.00321" /><atom value="35.453"/></material>
<material name="sK" formula=" " Z="19."><D value="0.00086" /><atom value="39.10"/></material>
<material name="sCa" formula=" " Z="20."><D value="0.00155" /><atom value="40.08"/></material>
<material name="sFe" formula=" " Z="26."><D value="0.00786" /><atom value="55.847"/></material>
<material name="sZn" formula=" " Z="30."><D value="0.00714" /><atom value="65.37"/></material>
<material name="sRb" formula=" " Z="37."><D value="0.00153" /><atom value="85.47"/></material>
<material name="sSr" formula=" " Z="38."><D value="0.00260" /><atom value="87.62"/></material>
<material name="sZr" formula=" " Z="40."><D value="0.00649" /><atom value="91.22"/></material>
<material name="sPb" formula=" " Z="82."><D value="0.01140" /><atom value="207.19"/></material>
<material formula=" " name="Skeleton">
<D value="1.4" />
<fraction n="0.07337" ref="sH" />
<fraction n="0.25475" ref="sC" />
<fraction n="0.03057" ref="sN" />
<fraction n="0.47893" ref="sO" />
<fraction n="0.00025" ref="sF" />
<fraction n="0.00326" ref="sNa" />
<fraction n="0.00112" ref="sMg" />
<fraction n="0.00002" ref="sSi" />
<fraction n="0.05095" ref="sP" />
<fraction n="0.00173" ref="sS" />
<fraction n="0.00143" ref="sCl" />
<fraction n="0.00153" ref="sK" />
<fraction n="0.10190" ref="sCa" />
<fraction n="0.00008" ref="sFe" />
<fraction n="0.00005" ref="sZn" />
<fraction n="0.00002" ref="sRb" />
<fraction n="0.00003" ref="sSr" />
<fraction n="0.00001" ref="sPb" />
</material>
</materials>
<solids>
<eltube aunit="cm" lunit="cm" name="LeftArmBone" dx="1.21" dy="2.65" dz="31.10" />
</solids>
<structure>
<volume name="LeftArmBoneVolume" >
<materialref ref="Skeleton" />
<solidref ref="LeftArmBone" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="LeftArmBoneVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Male/ORNLLeftKidney.gdml
+136
View File
@@ -0,0 +1,136 @@
<?xml version="1.0" encoding="UTF-8" ?>
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="SubtrKidneyRelativePos" unit="cm" x="-5.18" y="0.0" z="0.0" />
<position name="OrganPos" unit="cm" x="5.18" y="5.88" z="-2.25" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
<material name="sH" formula=" " Z="1.">
<D value="0.00009" />
<atom value="1.008"/>
</material>
<material name="sC" formula=" " Z="6.">
<D value="0.00226" />
<atom value="12.011"/>
</material>
<material name="sN" formula=" " Z="7.">
<D value="0.00125" />
<atom value="14.006"/>
</material>
<material name="sO" formula=" " Z="8.">
<D value="0.00143" />
<atom value="15.999"/>
</material>
<material name="sF" formula=" " Z="9.">
<D value="0.00169" />
<atom value="18.998"/>
</material>
<material name="sNa" formula=" " Z="11.">
<D value="0.00097" />
<atom value="22.989"/>
</material>
<material name="sMg" formula=" " Z="12.">
<D value="0.00174" />
<atom value="24.3"/>
</material>
<material name="sSi" formula=" " Z="14.">
<D value="0.00233" />
<atom value="28.086"/>
</material>
<material name="sP" formula=" " Z="15.">
<D value="0.00182" />
<atom value="30.973"/>
</material>
<material name="sS" formula=" " Z="16.">
<D value="0.00207" />
<atom value="32.064"/>
</material>
<material name="sCl" formula=" " Z="17.">
<D value="0.00321" />
<atom value="35.453"/>
</material>
<material name="sK" formula=" " Z="19.">
<D value="0.00086" />
<atom value="39.10"/>
</material>
<material name="sCa" formula=" " Z="20.">
<D value="0.00155" />
<atom value="40.08"/>
</material>
<material name="sFe" formula=" " Z="26.">
<D value="0.00786" />
<atom value="55.847"/>
</material>
<material name="sZn" formula=" " Z="30.">
<D value="0.00714" />
<atom value="65.37"/>
</material>
<material name="sRb" formula=" " Z="37.">
<D value="0.00153" />
<atom value="85.47"/>
</material>
<material name="sSr" formula=" " Z="38.">
<D value="0.00260" />
<atom value="87.62"/>
</material>
<material name="sZr" formula=" " Z="40.">
<D value="0.00649" />
<atom value="91.22"/>
</material>
<material name="sPb" formula=" " Z="82.">
<D value="0.01140" />
<atom value="207.19"/>
</material>
<material formula=" " name="SoftTissue">
<D value="1.04" />
<fraction n="0.10454" ref="sH" />
<fraction n="0.22663" ref="sC" />
<fraction n="0.02490" ref="sN" />
<fraction n="0.63525" ref="sO" />
<fraction n="0.00112" ref="sNa" />
<fraction n="0.00013" ref="sMg" />
<fraction n="0.00030" ref="sSi" />
<fraction n="0.00134" ref="sP" />
<fraction n="0.00204" ref="sS" />
<fraction n="0.00133" ref="sCl" />
<fraction n="0.00208" ref="sK" />
<fraction n="0.00024" ref="sCa" />
<fraction n="0.00005" ref="sFe" />
<fraction n="0.00003" ref="sZn" />
<fraction n="0.00001" ref="sRb" />
<fraction n="0.00001" ref="sZr" />
</material>
</materials>
<solids>
<ellipsoid aunit="cm" lunit="cm" name="OneKidney" ax="4.05" by="1.53" cz="4.96" zcut1="-4.96" zcut2="4.96" />
<box aunit="cm" lunit="cm" name="SubtrKidney" x="4.96" y="20.00" z="20.00" />
<subtraction name="LeftKidney">
<first ref="OneKidney" />
<second ref="SubtrKidney" />
<positionref ref="SubtrKidneyRelativePos" />
</subtraction>
</solids>
<structure>
<volume name="LeftKidneyVolume" >
<materialref ref="SoftTissue" />
<solidref ref="LeftKidney" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="LeftKidneyVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Male/ORNLLeftLeg.gdml
+122
View File
@@ -0,0 +1,122 @@
<?xml version="1.0" encoding="UTF-8" ?>
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="OrganPos" unit="cm" x="7.01" y="-39.1" z="0" />
<rotation name="OrganRot" unit="degree" x="90" y="0" z="0" />
</define>
<materials>
<material name="sH" formula=" " Z="1.">
<D value="0.00009" />
<atom value="1.008"/>
</material>
<material name="sC" formula=" " Z="6.">
<D value="0.00226" />
<atom value="12.011"/>
</material>
<material name="sN" formula=" " Z="7.">
<D value="0.00125" />
<atom value="14.006"/>
</material>
<material name="sO" formula=" " Z="8.">
<D value="0.00143" />
<atom value="15.999"/>
</material>
<material name="sF" formula=" " Z="9.">
<D value="0.00169" />
<atom value="18.998"/>
</material>
<material name="sNa" formula=" " Z="11.">
<D value="0.00097" />
<atom value="22.989"/>
</material>
<material name="sMg" formula=" " Z="12.">
<D value="0.00174" />
<atom value="24.3"/>
</material>
<material name="sSi" formula=" " Z="14.">
<D value="0.00233" />
<atom value="28.086"/>
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<D value="0.00182" />
<atom value="30.973"/>
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<material name="sS" formula=" " Z="16.">
<D value="0.00207" />
<atom value="32.064"/>
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<material name="sCl" formula=" " Z="17.">
<D value="0.00321" />
<atom value="35.453"/>
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<material name="sK" formula=" " Z="19.">
<D value="0.00086" />
<atom value="39.10"/>
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<material name="sCa" formula=" " Z="20.">
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<atom value="40.08"/>
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<material name="sFe" formula=" " Z="26.">
<D value="0.00786" />
<atom value="55.847"/>
</material>
<material name="sZn" formula=" " Z="30.">
<D value="0.00714" />
<atom value="65.37"/>
</material>
<material name="sRb" formula=" " Z="37.">
<D value="0.00153" />
<atom value="85.47"/>
</material>
<material name="sSr" formula=" " Z="38.">
<D value="0.00260" />
<atom value="87.62"/>
</material>
<material name="sZr" formula=" " Z="40.">
<D value="0.00649" />
<atom value="91.22"/>
</material>
<material name="sPb" formula=" " Z="82.">
<D value="0.01140" />
<atom value="207.19"/>
</material>
<material formula=" " name="SoftTissue">
<D value="1.04" />
<fraction n="0.10454" ref="sH" />
<fraction n="0.22663" ref="sC" />
<fraction n="0.02490" ref="sN" />
<fraction n="0.63525" ref="sO" />
<fraction n="0.00112" ref="sNa" />
<fraction n="0.00013" ref="sMg" />
<fraction n="0.00030" ref="sSi" />
<fraction n="0.00134" ref="sP" />
<fraction n="0.00204" ref="sS" />
<fraction n="0.00133" ref="sCl" />
<fraction n="0.00208" ref="sK" />
<fraction n="0.00024" ref="sCa" />
<fraction n="0.00005" ref="sFe" />
<fraction n="0.00003" ref="sZn" />
<fraction n="0.00001" ref="sRb" />
<fraction n="0.00001" ref="sZr" />
</material>
</materials>
<solids>
<tube aunit="radian" lunit="cm" name="OneLeg" z="78.0" rmax="7.0" deltaphi="TWOPI"/>
</solids>
<structure>
<volume name="LeftLegVolume" >
<materialref ref="SoftTissue" />
<solidref ref="OneLeg" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="LeftLegVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Male/ORNLLeftLegBone.gdml
+123
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@@ -0,0 +1,123 @@
<?xml version="1.0" encoding="UTF-8" ?>
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="OrganPos" unit="cm" x="0.0" y="0.0" z="0.0" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
<material name="sH" formula=" " Z="1.">
<D value="0.00009" />
<atom value="1.008"/>
</material>
<material name="sC" formula=" " Z="6.">
<D value="0.00226" />
<atom value="12.011"/>
</material>
<material name="sN" formula=" " Z="7.">
<D value="0.00125" />
<atom value="14.006"/>
</material>
<material name="sO" formula=" " Z="8.">
<D value="0.00143" />
<atom value="15.999"/>
</material>
<material name="sF" formula=" " Z="9.">
<D value="0.00169" />
<atom value="18.998"/>
</material>
<material name="sNa" formula=" " Z="11.">
<D value="0.00097" />
<atom value="22.989"/>
</material>
<material name="sMg" formula=" " Z="12.">
<D value="0.00174" />
<atom value="24.3"/>
</material>
<material name="sSi" formula=" " Z="14.">
<D value="0.00233" />
<atom value="28.086"/>
</material>
<material name="sP" formula=" " Z="15.">
<D value="0.00182" />
<atom value="30.973"/>
</material>
<material name="sS" formula=" " Z="16.">
<D value="0.00207" />
<atom value="32.064"/>
</material>
<material name="sCl" formula=" " Z="17.">
<D value="0.00321" />
<atom value="35.453"/>
</material>
<material name="sK" formula=" " Z="19.">
<D value="0.00086" />
<atom value="39.10"/>
</material>
<material name="sCa" formula=" " Z="20.">
<D value="0.00155" />
<atom value="40.08"/>
</material>
<material name="sFe" formula=" " Z="26.">
<D value="0.00786" />
<atom value="55.847"/>
</material>
<material name="sZn" formula=" " Z="30.">
<D value="0.00714" />
<atom value="65.37"/>
</material>
<material name="sRb" formula=" " Z="37.">
<D value="0.00153" />
<atom value="85.47"/>
</material>
<material name="sSr" formula=" " Z="38.">
<D value="0.00260" />
<atom value="87.62"/>
</material>
<material name="sZr" formula=" " Z="40.">
<D value="0.00649" />
<atom value="91.22"/>
</material>
<material name="sPb" formula=" " Z="82.">
<D value="0.01140" />
<atom value="207.19"/>
</material>
<material formula=" " name="Skeleton">
<D value="1.4" />
<fraction n="0.07337" ref="sH" />
<fraction n="0.25475" ref="sC" />
<fraction n="0.03057" ref="sN" />
<fraction n="0.47893" ref="sO" />
<fraction n="0.00025" ref="sF" />
<fraction n="0.00326" ref="sNa" />
<fraction n="0.00112" ref="sMg" />
<fraction n="0.00002" ref="sSi" />
<fraction n="0.05095" ref="sP" />
<fraction n="0.00173" ref="sS" />
<fraction n="0.00143" ref="sCl" />
<fraction n="0.00153" ref="sK" />
<fraction n="0.10190" ref="sCa" />
<fraction n="0.00008" ref="sFe" />
<fraction n="0.00005" ref="sZn" />
<fraction n="0.00002" ref="sRb" />
<fraction n="0.00003" ref="sSr" />
<fraction n="0.00001" ref="sPb" />
</material>
</materials>
<solids>
<eltube aunit="cm" lunit="cm" name="OneLegBone" dx="2.0" dy="1.0" dz="39.00" />
<structure>
<volume name="LeftLegBoneVolume" >
<materialref ref="Skeleton" />
<solidref ref="OneLegBone" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="LeftLegBoneVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Male/ORNLLeftLung.gdml
+133
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@@ -0,0 +1,133 @@
<?xml version="1.0" encoding="UTF-8" ?>
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="SubtrLungRelativePos" unit="cm" x="7.50" y="-4.0" z="0.0" />
<rotation name="SubtrLungRelativeRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="7.33" y="0.0" z="7.66" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="180." />
</define>
<materials>
<material name="sH" formula=" " Z="1.">
<D value="0.00009" />
<atom value="1.008"/>
</material>
<material name="sC" formula=" " Z="6.">
<D value="0.00226" />
<atom value="12.011"/>
</material>
<material name="sN" formula=" " Z="7.">
<D value="0.00125" />
<atom value="14.006"/>
</material>
<material name="sO" formula=" " Z="8.">
<D value="0.00143" />
<atom value="15.999"/>
</material>
<material name="sF" formula=" " Z="9.">
<D value="0.00169" />
<atom value="18.998"/>
</material>
<material name="sNa" formula=" " Z="11.">
<D value="0.00097" />
<atom value="22.989"/>
</material>
<material name="sMg" formula=" " Z="12.">
<D value="0.00174" />
<atom value="24.3"/>
</material>
<material name="sSi" formula=" " Z="14.">
<D value="0.00233" />
<atom value="28.086"/>
</material>
<material name="sP" formula=" " Z="15.">
<D value="0.00182" />
<atom value="30.973"/>
</material>
<material name="sS" formula=" " Z="16.">
<D value="0.00207" />
<atom value="32.064"/>
</material>
<material name="sCl" formula=" " Z="17.">
<D value="0.00321" />
<atom value="35.453"/>
</material>
<material name="sK" formula=" " Z="19.">
<D value="0.00086" />
<atom value="39.10"/>
</material>
<material name="sCa" formula=" " Z="20.">
<D value="0.00155" />
<atom value="40.08"/>
</material>
<material name="sFe" formula=" " Z="26.">
<D value="0.00786" />
<atom value="55.847"/>
</material>
<material name="sZn" formula=" " Z="30.">
<D value="0.00714" />
<atom value="65.37"/>
</material>
<material name="sRb" formula=" " Z="37.">
<D value="0.00153" />
<atom value="85.47"/>
</material>
<material name="sSr" formula=" " Z="38.">
<D value="0.00260" />
<atom value="87.62"/>
</material>
<material name="sZr" formula=" " Z="40.">
<D value="0.00649" />
<atom value="91.22"/>
</material>
<material name="sPb" formula=" " Z="82.">
<D value="0.01140" />
<atom value="207.19"/>
</material>
<material formula=" " name="LungMat">
<D value="0.296" />
<fraction n="0.10134" ref="sH" />
<fraction n="0.10238" ref="sC" />
<fraction n="0.02866" ref="sN" />
<fraction n="0.75752" ref="sO" />
<fraction n="0.00184" ref="sNa" />
<fraction n="0.00007" ref="sMg" />
<fraction n="0.00006" ref="sSi" />
<fraction n="0.00080" ref="sP" />
<fraction n="0.00225" ref="sS" />
<fraction n="0.00266" ref="sCl" />
<fraction n="0.00194" ref="sK" />
<fraction n="0.00009" ref="sCa" />
<fraction n="0.00037" ref="sFe" />
<fraction n="0.00001" ref="sZn" />
<fraction n="0.00001" ref="sRb" />
</material>
</materials>
<solids>
<ellipsoid aunit="cm" lunit="cm" name="OneLung" ax="4.09" by="6.98" cz="20.55" zcut1="0.0" zcut2="20.55" />
<ellipsoid aunit="cm" lunit="cm" name="SubtrLung" ax="5.0" by="7.0" cz="20.55" />
<subtraction name="LeftLung">
<first ref="OneLung" />
<second ref="SubtrLung" />
<positionref ref="SubtrLungRelativePos" />
<rotationref ref="SubtrLungRelativeRot" />
</subtraction>
</solids>
<structure>
<volume name="LeftLungVolume" >
<materialref ref="LungMat" />
<solidref ref="LeftLung" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="LeftLungVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Male/ORNLLowerLargeIntestine.gdml
+2 -2
View File
@@ -9,8 +9,8 @@
<rotation name="SigmoidColonLowerLargeIntestineRelativeRot" unit="degree" x="0" y="180" z="90" />
<position name="DescendingColonLowerLargeIntestineRelativePos" unit="cm" x="-5.16" y="0.0" z="-6.885" />
<rotation name="DescendingColonLowerLargeIntestineRelativeRot" unit="degree" x="-90" y="0" z="0" />
<position name="LowerLargeIntestinePos" unit="cm" x="7.86" y="-2.31" z="-16.79" />
<rotation name="LowerLargeIntestineRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="7.86" y="-2.31" z="-16.79" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
examples/advanced/human_phantom/gdmlData/Male/ORNLMiddleLowerSpine.gdml
+2 -2
View File
@@ -6,8 +6,8 @@
<constant name="HALFPI" value="0.5*pi"/>
<position name="SpineMidLowRelativePos" unit="cm" x="0.0" y="0.0" z="-21.56" />
<position name="MiddleLowerSpinePos" unit="cm" x="0.0" y="5.39" z="15.905" />
<rotation name="MiddleLowerSpineRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="0.0" y="5.39" z="15.905" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
examples/advanced/human_phantom/gdmlData/Male/ORNLPancreas.gdml
+2 -2
View File
@@ -6,8 +6,8 @@
<constant name="HALFPI" value="0.5*pi"/>
<position name="FirstSubtrPancreasRelativePos" unit="cm" x="-2.87" y="0.0" z="-8.685" />
<position name="PancreasPos" unit="cm" x="-0.72" y="0.0" z="1.8" />
<rotation name="PancreasRot" unit="degree" x="0" y="90" z="0" />
<position name="OrganPos" unit="cm" x="-0.72" y="0.0" z="1.8" />
<rotation name="OrganRot" unit="degree" x="0" y="90" z="0" />
</define>
<materials>
examples/advanced/human_phantom/gdmlData/Male/ORNLPelvis.gdml
+2 -2
View File
@@ -8,8 +8,8 @@
<position name="PelvisRelativePos" unit="cm" x="0.0" y="0.0" z="0.0" />
<position name="FirstSubtrPelvisRelativePos" unit="cm" x="0.0" y="14.70" z="-8.21" />
<position name="SecondSubtrPelvisRelativePos" unit="cm" x="0.0" y="-11.76" z="0.0" />
<position name="PelvisPos" unit="cm" x="0.0" y="-2.94" z="-21.635" />
<rotation name="PelvisRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="0.0" y="-2.94" z="-21.635" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
examples/advanced/human_phantom/gdmlData/Male/ORNLRightArmBone.gdml
+70
View File
@@ -0,0 +1,70 @@
<?xml version="1.0" encoding="UTF-8" ?>
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="OrganPos" unit="cm" x="-15.87" y="0.0" z="0.0" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
<material name="sH" formula=" " Z="1."><D value="0.00009" /><atom value="1.008"/></material>
<material name="sC" formula=" " Z="6."><D value="0.00226" /><atom value="12.011"/></material>
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<material name="sO" formula=" " Z="8."><D value="0.00143" /><atom value="15.999"/></material>
<material name="sF" formula=" " Z="9."><D value="0.00169" /><atom value="18.998"/></material>
<material name="sNa" formula=" " Z="11."><D value="0.00097" /><atom value="22.989"/></material>
<material name="sMg" formula=" " Z="12."><D value="0.00174" /><atom value="24.3"/></material>
<material name="sSi" formula=" " Z="14."><D value="0.00233" /><atom value="28.086"/></material>
<material name="sP" formula=" " Z="15."><D value="0.00182" /><atom value="30.973"/></material>
<material name="sS" formula=" " Z="16."><D value="0.00207" /><atom value="32.064"/></material>
<material name="sCl" formula=" " Z="17."><D value="0.00321" /><atom value="35.453"/></material>
<material name="sK" formula=" " Z="19."><D value="0.00086" /><atom value="39.10"/></material>
<material name="sCa" formula=" " Z="20."><D value="0.00155" /><atom value="40.08"/></material>
<material name="sFe" formula=" " Z="26."><D value="0.00786" /><atom value="55.847"/></material>
<material name="sZn" formula=" " Z="30."><D value="0.00714" /><atom value="65.37"/></material>
<material name="sRb" formula=" " Z="37."><D value="0.00153" /><atom value="85.47"/></material>
<material name="sSr" formula=" " Z="38."><D value="0.00260" /><atom value="87.62"/></material>
<material name="sZr" formula=" " Z="40."><D value="0.00649" /><atom value="91.22"/></material>
<material name="sPb" formula=" " Z="82."><D value="0.01140" /><atom value="207.19"/></material>
<material formula=" " name="Skeleton">
<D value="1.4" />
<fraction n="0.07337" ref="sH" />
<fraction n="0.25475" ref="sC" />
<fraction n="0.03057" ref="sN" />
<fraction n="0.47893" ref="sO" />
<fraction n="0.00025" ref="sF" />
<fraction n="0.00326" ref="sNa" />
<fraction n="0.00112" ref="sMg" />
<fraction n="0.00002" ref="sSi" />
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<fraction n="0.00143" ref="sCl" />
<fraction n="0.00153" ref="sK" />
<fraction n="0.10190" ref="sCa" />
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<fraction n="0.00005" ref="sZn" />
<fraction n="0.00002" ref="sRb" />
<fraction n="0.00003" ref="sSr" />
<fraction n="0.00001" ref="sPb" />
</material>
</materials>
<solids>
<eltube aunit="cm" lunit="cm" name="RightArmBone" dx="1.21" dy="2.65" dz="31.10" />
</solids>
<structure>
<volume name="RightArmBoneVolume" >
<materialref ref="Skeleton" />
<solidref ref="RightArmBone" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="RightArmBoneVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Male/ORNLRightKidney.gdml
+136
View File
@@ -0,0 +1,136 @@
<?xml version="1.0" encoding="UTF-8" ?>
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="SubtrKidneyRelativePos" unit="cm" x="5.18" y="0.0" z="0.0" />
<position name="OrganPos" unit="cm" x="-5.18" y="5.88" z="-2.25" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
<material name="sH" formula=" " Z="1.">
<D value="0.00009" />
<atom value="1.008"/>
</material>
<material name="sC" formula=" " Z="6.">
<D value="0.00226" />
<atom value="12.011"/>
</material>
<material name="sN" formula=" " Z="7.">
<D value="0.00125" />
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</material>
<material name="sO" formula=" " Z="8.">
<D value="0.00143" />
<atom value="15.999"/>
</material>
<material name="sF" formula=" " Z="9.">
<D value="0.00169" />
<atom value="18.998"/>
</material>
<material name="sNa" formula=" " Z="11.">
<D value="0.00097" />
<atom value="22.989"/>
</material>
<material name="sMg" formula=" " Z="12.">
<D value="0.00174" />
<atom value="24.3"/>
</material>
<material name="sSi" formula=" " Z="14.">
<D value="0.00233" />
<atom value="28.086"/>
</material>
<material name="sP" formula=" " Z="15.">
<D value="0.00182" />
<atom value="30.973"/>
</material>
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<D value="0.00207" />
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</material>
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<D value="0.00321" />
<atom value="35.453"/>
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<material name="sK" formula=" " Z="19.">
<D value="0.00086" />
<atom value="39.10"/>
</material>
<material name="sCa" formula=" " Z="20.">
<D value="0.00155" />
<atom value="40.08"/>
</material>
<material name="sFe" formula=" " Z="26.">
<D value="0.00786" />
<atom value="55.847"/>
</material>
<material name="sZn" formula=" " Z="30.">
<D value="0.00714" />
<atom value="65.37"/>
</material>
<material name="sRb" formula=" " Z="37.">
<D value="0.00153" />
<atom value="85.47"/>
</material>
<material name="sSr" formula=" " Z="38.">
<D value="0.00260" />
<atom value="87.62"/>
</material>
<material name="sZr" formula=" " Z="40.">
<D value="0.00649" />
<atom value="91.22"/>
</material>
<material name="sPb" formula=" " Z="82.">
<D value="0.01140" />
<atom value="207.19"/>
</material>
<material formula=" " name="SoftTissue">
<D value="1.04" />
<fraction n="0.10454" ref="sH" />
<fraction n="0.22663" ref="sC" />
<fraction n="0.02490" ref="sN" />
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<fraction n="0.00013" ref="sMg" />
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<fraction n="0.00003" ref="sZn" />
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<fraction n="0.00001" ref="sZr" />
</material>
</materials>
<solids>
<ellipsoid aunit="cm" lunit="cm" name="OneKidney" ax="4.05" by="1.53" cz="4.96" zcut1="-4.96" zcut2="4.96" />
<box aunit="cm" lunit="cm" name="SubtrKidney" x="4.96" y="20.00" z="20.00" />
<subtraction name="RightKidney">
<first ref="OneKidney" />
<second ref="SubtrKidney" />
<positionref ref="SubtrKidneyRelativePos" />
</subtraction>
</solids>
<structure>
<volume name="RightKidneyVolume" >
<materialref ref="SoftTissue" />
<solidref ref="RightKidney" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="RightKidneyVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Male/ORNLRightLeg.gdml
+122
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@@ -0,0 +1,122 @@
<?xml version="1.0" encoding="UTF-8" ?>
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="OrganPos" unit="cm" x="-7.01" y="-39.1" z="0" />
<rotation name="OrganRot" unit="degree" x="90" y="0" z="0" />
</define>
<materials>
<material name="sH" formula=" " Z="1.">
<D value="0.00009" />
<atom value="1.008"/>
</material>
<material name="sC" formula=" " Z="6.">
<D value="0.00226" />
<atom value="12.011"/>
</material>
<material name="sN" formula=" " Z="7.">
<D value="0.00125" />
<atom value="14.006"/>
</material>
<material name="sO" formula=" " Z="8.">
<D value="0.00143" />
<atom value="15.999"/>
</material>
<material name="sF" formula=" " Z="9.">
<D value="0.00169" />
<atom value="18.998"/>
</material>
<material name="sNa" formula=" " Z="11.">
<D value="0.00097" />
<atom value="22.989"/>
</material>
<material name="sMg" formula=" " Z="12.">
<D value="0.00174" />
<atom value="24.3"/>
</material>
<material name="sSi" formula=" " Z="14.">
<D value="0.00233" />
<atom value="28.086"/>
</material>
<material name="sP" formula=" " Z="15.">
<D value="0.00182" />
<atom value="30.973"/>
</material>
<material name="sS" formula=" " Z="16.">
<D value="0.00207" />
<atom value="32.064"/>
</material>
<material name="sCl" formula=" " Z="17.">
<D value="0.00321" />
<atom value="35.453"/>
</material>
<material name="sK" formula=" " Z="19.">
<D value="0.00086" />
<atom value="39.10"/>
</material>
<material name="sCa" formula=" " Z="20.">
<D value="0.00155" />
<atom value="40.08"/>
</material>
<material name="sFe" formula=" " Z="26.">
<D value="0.00786" />
<atom value="55.847"/>
</material>
<material name="sZn" formula=" " Z="30.">
<D value="0.00714" />
<atom value="65.37"/>
</material>
<material name="sRb" formula=" " Z="37.">
<D value="0.00153" />
<atom value="85.47"/>
</material>
<material name="sSr" formula=" " Z="38.">
<D value="0.00260" />
<atom value="87.62"/>
</material>
<material name="sZr" formula=" " Z="40.">
<D value="0.00649" />
<atom value="91.22"/>
</material>
<material name="sPb" formula=" " Z="82.">
<D value="0.01140" />
<atom value="207.19"/>
</material>
<material formula=" " name="SoftTissue">
<D value="1.04" />
<fraction n="0.10454" ref="sH" />
<fraction n="0.22663" ref="sC" />
<fraction n="0.02490" ref="sN" />
<fraction n="0.63525" ref="sO" />
<fraction n="0.00112" ref="sNa" />
<fraction n="0.00013" ref="sMg" />
<fraction n="0.00030" ref="sSi" />
<fraction n="0.00134" ref="sP" />
<fraction n="0.00204" ref="sS" />
<fraction n="0.00133" ref="sCl" />
<fraction n="0.00208" ref="sK" />
<fraction n="0.00024" ref="sCa" />
<fraction n="0.00005" ref="sFe" />
<fraction n="0.00003" ref="sZn" />
<fraction n="0.00001" ref="sRb" />
<fraction n="0.00001" ref="sZr" />
</material>
</materials>
<solids>
<tube aunit="radian" lunit="cm" name="OneLeg" z="78.0" rmax="7.0" deltaphi="TWOPI"/>
</solids>
<structure>
<volume name="RightLegVolume" >
<materialref ref="SoftTissue" />
<solidref ref="OneLeg" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="RightLegVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Male/ORNLRightLegBone.gdml
+125
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@@ -0,0 +1,125 @@
<?xml version="1.0" encoding="UTF-8" ?>
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="OrganPos" unit="cm" x="0.0" y="0.0" z="0.0" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
<material name="sH" formula=" " Z="1.">
<D value="0.00009" />
<atom value="1.008"/>
</material>
<material name="sC" formula=" " Z="6.">
<D value="0.00226" />
<atom value="12.011"/>
</material>
<material name="sN" formula=" " Z="7.">
<D value="0.00125" />
<atom value="14.006"/>
</material>
<material name="sO" formula=" " Z="8.">
<D value="0.00143" />
<atom value="15.999"/>
</material>
<material name="sF" formula=" " Z="9.">
<D value="0.00169" />
<atom value="18.998"/>
</material>
<material name="sNa" formula=" " Z="11.">
<D value="0.00097" />
<atom value="22.989"/>
</material>
<material name="sMg" formula=" " Z="12.">
<D value="0.00174" />
<atom value="24.3"/>
</material>
<material name="sSi" formula=" " Z="14.">
<D value="0.00233" />
<atom value="28.086"/>
</material>
<material name="sP" formula=" " Z="15.">
<D value="0.00182" />
<atom value="30.973"/>
</material>
<material name="sS" formula=" " Z="16.">
<D value="0.00207" />
<atom value="32.064"/>
</material>
<material name="sCl" formula=" " Z="17.">
<D value="0.00321" />
<atom value="35.453"/>
</material>
<material name="sK" formula=" " Z="19.">
<D value="0.00086" />
<atom value="39.10"/>
</material>
<material name="sCa" formula=" " Z="20.">
<D value="0.00155" />
<atom value="40.08"/>
</material>
<material name="sFe" formula=" " Z="26.">
<D value="0.00786" />
<atom value="55.847"/>
</material>
<material name="sZn" formula=" " Z="30.">
<D value="0.00714" />
<atom value="65.37"/>
</material>
<material name="sRb" formula=" " Z="37.">
<D value="0.00153" />
<atom value="85.47"/>
</material>
<material name="sSr" formula=" " Z="38.">
<D value="0.00260" />
<atom value="87.62"/>
</material>
<material name="sZr" formula=" " Z="40.">
<D value="0.00649" />
<atom value="91.22"/>
</material>
<material name="sPb" formula=" " Z="82.">
<D value="0.01140" />
<atom value="207.19"/>
</material>
<material formula=" " name="Skeleton">
<D value="1.4" />
<fraction n="0.07337" ref="sH" />
<fraction n="0.25475" ref="sC" />
<fraction n="0.03057" ref="sN" />
<fraction n="0.47893" ref="sO" />
<fraction n="0.00025" ref="sF" />
<fraction n="0.00326" ref="sNa" />
<fraction n="0.00112" ref="sMg" />
<fraction n="0.00002" ref="sSi" />
<fraction n="0.05095" ref="sP" />
<fraction n="0.00173" ref="sS" />
<fraction n="0.00143" ref="sCl" />
<fraction n="0.00153" ref="sK" />
<fraction n="0.10190" ref="sCa" />
<fraction n="0.00008" ref="sFe" />
<fraction n="0.00005" ref="sZn" />
<fraction n="0.00002" ref="sRb" />
<fraction n="0.00003" ref="sSr" />
<fraction n="0.00001" ref="sPb" />
</material>
</materials>
<solids>
<eltube aunit="cm" lunit="cm" name="OneLegBone" dx="2.0" dy="1.0" dz="39.00" />
</solids>
<structure>
<volume name="RightLegBoneVolume" >
<materialref ref="Skeleton" />
<solidref ref="OneLegBone" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="RightLegBoneVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Male/ORNLRightLung.gdml
+132
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@@ -0,0 +1,132 @@
<?xml version="1.0" encoding="UTF-8" ?>
<gdml xmlns:gdml="http://cern.ch/2001/Schemas/GDML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="/users/guatelli/GDML/src/GDMLSchema/gdml.xsd" >
<define>
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="SubtrLungRelativePos" unit="cm" x="7.50" y="-4.0" z="0.0" />
<rotation name="SubtrLungRelativeRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="-7.33" y="0.0" z="7.66" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="-180." />
</define>
<materials>
<material name="sH" formula=" " Z="1.">
<D value="0.00009" />
<atom value="1.008"/>
</material>
<material name="sC" formula=" " Z="6.">
<D value="0.00226" />
<atom value="12.011"/>
</material>
<material name="sN" formula=" " Z="7.">
<D value="0.00125" />
<atom value="14.006"/>
</material>
<material name="sO" formula=" " Z="8.">
<D value="0.00143" />
<atom value="15.999"/>
</material>
<material name="sF" formula=" " Z="9.">
<D value="0.00169" />
<atom value="18.998"/>
</material>
<material name="sNa" formula=" " Z="11.">
<D value="0.00097" />
<atom value="22.989"/>
</material>
<material name="sMg" formula=" " Z="12.">
<D value="0.00174" />
<atom value="24.3"/>
</material>
<material name="sSi" formula=" " Z="14.">
<D value="0.00233" />
<atom value="28.086"/>
</material>
<material name="sP" formula=" " Z="15.">
<D value="0.00182" />
<atom value="30.973"/>
</material>
<material name="sS" formula=" " Z="16.">
<D value="0.00207" />
<atom value="32.064"/>
</material>
<material name="sCl" formula=" " Z="17.">
<D value="0.00321" />
<atom value="35.453"/>
</material>
<material name="sK" formula=" " Z="19.">
<D value="0.00086" />
<atom value="39.10"/>
</material>
<material name="sCa" formula=" " Z="20.">
<D value="0.00155" />
<atom value="40.08"/>
</material>
<material name="sFe" formula=" " Z="26.">
<D value="0.00786" />
<atom value="55.847"/>
</material>
<material name="sZn" formula=" " Z="30.">
<D value="0.00714" />
<atom value="65.37"/>
</material>
<material name="sRb" formula=" " Z="37.">
<D value="0.00153" />
<atom value="85.47"/>
</material>
<material name="sSr" formula=" " Z="38.">
<D value="0.00260" />
<atom value="87.62"/>
</material>
<material name="sZr" formula=" " Z="40.">
<D value="0.00649" />
<atom value="91.22"/>
</material>
<material name="sPb" formula=" " Z="82.">
<D value="0.01140" />
<atom value="207.19"/>
</material>
<material formula=" " name="LungMat">
<D value="0.296" />
<fraction n="0.10134" ref="sH" />
<fraction n="0.10238" ref="sC" />
<fraction n="0.02866" ref="sN" />
<fraction n="0.75752" ref="sO" />
<fraction n="0.00184" ref="sNa" />
<fraction n="0.00007" ref="sMg" />
<fraction n="0.00006" ref="sSi" />
<fraction n="0.00080" ref="sP" />
<fraction n="0.00225" ref="sS" />
<fraction n="0.00266" ref="sCl" />
<fraction n="0.00194" ref="sK" />
<fraction n="0.00009" ref="sCa" />
<fraction n="0.00037" ref="sFe" />
<fraction n="0.00001" ref="sZn" />
<fraction n="0.00001" ref="sRb" />
</material>
</materials>
<solids>
<ellipsoid aunit="cm" lunit="cm" name="OneLung" ax="4.09" by="6.98" cz="20.55" zcut1="0.0" zcut2="20.55" />
<ellipsoid aunit="cm" lunit="cm" name="SubtrLung" ax="5.0" by="7.0" cz="20.55" />
<subtraction name="RightLung">
<first ref="OneLung" />
<second ref="SubtrLung" />
<positionref ref="SubtrLungRelativePos" />
<rotationref ref="SubtrLungRelativeRot" />
</subtraction>
</solids>
<structure>
<volume name="RightLungVolume" >
<materialref ref="LungMat" />
<solidref ref="RightLung" />
</volume>
</structure>
<setup name="Default" version="1.0" >
<world ref="RightLungVolume" />
</setup>
</gdml>
examples/advanced/human_phantom/gdmlData/Male/ORNLSkull.gdml
+2 -2
View File
@@ -8,8 +8,8 @@
<position name="FirstSubtrFacialSkeletonRelativePos" unit="cm" x="0.0" y="0.0" z="0.0" />
<position name="SecondSubtrFacialSkeletonRelativePos" unit="cm" x="0.0" y="8.91" z="0.0" />
<position name="SkullRelativePos" unit="cm" x="0" y="0.0" z="5.13" />
<position name="SkullPos" unit="cm" x="0.0" y="0.0" z="4.795" />
<rotation name="SkullRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="0.0" y="0.0" z="4.795" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
examples/advanced/human_phantom/gdmlData/Male/ORNLSpleen.gdml
+2 -2
View File
@@ -4,8 +4,8 @@
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="SpleenPos" unit="cm" x="9.49" y="2.94" z="1.8" />
<rotation name="SpleenRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="9.49" y="2.94" z="1.8" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
examples/advanced/human_phantom/gdmlData/Male/ORNLStomach.gdml
+2 -2
View File
@@ -4,8 +4,8 @@
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="StomachPos" unit="cm" x="6.90" y="-3.92" z="0" />
<rotation name="StomachRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="6.90" y="-3.92" z="0" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
examples/advanced/human_phantom/gdmlData/Male/ORNLTrunk.gdml
+4 -4
View File
@@ -4,8 +4,8 @@
<constant name="PI" value="1.*pi" />
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="TrunkPos" unit="cm" x="0" y="31.55" z="0" />
<rotation name="TrunkRot" unit="degree" x="90" y="0" z="0" />
<position name="OrganPos" unit="cm" x="0" y="31.55" z="0" />
<rotation name="OrganRot" unit="degree" x="90" y="0" z="0" />
</define>
<materials>
@@ -107,13 +107,13 @@
</materials>
<solids>
<eltube aunit="cm" lunit="cm" name="Trunk" dx="17.25" dy="9.80" dz="31.55"/>
<eltube aunit="cm" lunit="cm" name="Organ" dx="17.25" dy="9.80" dz="31.55"/>
</solids>
<structure>
<volume name="TrunkVolume" >
<materialref ref="SoftTissue" />
<solidref ref="Trunk" />
<solidref ref="Organ" />
</volume>
</structure>
<setup name="Default" version="1.0" >
examples/advanced/human_phantom/gdmlData/Male/ORNLUpperLargeIntestine.gdml
+2 -2
View File
@@ -7,8 +7,8 @@
<position name="AscendingTransverseUpperLargeIntestineRelativePos" unit="cm" x="7.2" y="0.0" z="5.65" />
<rotation name="AscendingTransverseUpperLargeIntestineRelativeRot" unit="degree" x="90" y="0" z="90" />
<position name="UpperLargeIntestinePos" unit="cm" x="-7.33" y="-2.31" z="-14.22" />
<rotation name="UpperLargeIntestineRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="-7.33" y="-2.31" z="-14.22" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
examples/advanced/human_phantom/gdmlData/Male/ORNLUpperSpine.gdml
+2 -2
View File
@@ -5,8 +5,8 @@
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="UpperSpinePos" unit="cm" x="0.0" y="5.39" z="-3.26" />
<rotation name="UpperSpineRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="0.0" y="5.39" z="-3.26" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
examples/advanced/human_phantom/gdmlData/Male/ORNLUrinaryBladder.gdml
+2 -2
View File
@@ -5,8 +5,8 @@
<constant name="TWOPI" value="2.*pi"/>
<constant name="HALFPI" value="0.5*pi"/>
<position name="UrinaryBladderPos" unit="cm" x="0" y="-4.41" z="-24.34" />
<rotation name="UrinaryBladderRot" unit="degree" x="0" y="0" z="0" />
<position name="OrganPos" unit="cm" x="0" y="-4.41" z="-24.34" />
<rotation name="OrganRot" unit="degree" x="0" y="0" z="0" />
</define>
<materials>
examples/advanced/human_phantom/include/G4BasePhantomBuilder.hh
+102
View File
@@ -0,0 +1,102 @@
//
// ********************************************************************
// * License and Disclaimer *
// * *
// * The Geant4 software is copyright of the Copyright Holders of *
// * the Geant4 Collaboration. It is provided under the terms and *
// * conditions of the Geant4 Software License, included in the file *
// * LICENSE and available at http://cern.ch/geant4/license . These *
// * include a list of copyright holders. *
// * *
// * Neither the authors of this software system, nor their employing *
// * institutes,nor the agencies providing financial support for this *
// * work make any representation or warranty, express or implied, *
// * regarding this software system or assume any liability for its *
// * use. Please see the license in the file LICENSE and URL above *
// * for the full disclaimer and the limitation of liability. *
// * *
// * This code implementation is the result of the scientific and *
// * technical work of the GEANT4 collaboration. *
// * By using, copying, modifying or distributing the software (or *
// * any work based on the software) you agree to acknowledge its *
// * use in resulting scientific publications, and indicate your *
// * acceptance of all terms of the Geant4 Software license. *
// ********************************************************************
//
// Authors: S. Guatelli and M. G. Pia, INFN Genova, Italy
//
// Based on code developed by the undergraduate student G. Guerrieri
// Note: this is a preliminary beta-version of the code; an improved
// version will be distributed in the next Geant4 public release, compliant
// with the design in a forthcoming publication, and subject to a
// design and code review.
//
#ifndef G4BasePhantomBuilder_h
#define G4BasePhantomBuilder_h 1
#include "G4VPhysicalVolume.hh"
class G4VPhysicalVolume;
class G4BasePhantomBuilder
{
public:
G4BasePhantomBuilder();
~G4BasePhantomBuilder();
virtual void BuildHead(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildTrunk(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildLegs(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildNeck(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildUpperSpine(const G4String&,G4bool,G4bool) {return ;}
virtual void BuildMiddleLowerSpine(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildLeftLeg(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildRightLeg(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildLeftLegBone(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildRightLegBone(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildLeftArmBone(const G4String&,G4bool,G4bool) {return ;}
virtual void BuildRightArmBone(const G4String&,G4bool,G4bool) {return ;}
virtual void BuildSkull(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildRibCage(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildPelvis(const G4String&,G4bool,G4bool) {return ;};
//virtual void BuildScapulae(G4bool,G4bool) = 0;
//virtual void BuildClavicles(G4bool,G4bool) = 0;
virtual void BuildBrain(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildHeart(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildLeftLung(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildRightLung(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildStomach(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildUpperLargeIntestine(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildLowerLargeIntestine(const G4String&,G4bool,G4bool) {return ;};
// virtual void BuildEsophagus(G4bool,G4bool) = 0;
virtual void BuildLeftKidney(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildRightKidney(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildLeftAdrenal(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildRightAdrenal(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildLiver(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildPancreas(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildSpleen(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildUrinaryBladder(const G4String& ,G4bool,G4bool) {return ;};
virtual void BuildThyroid(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildLeftScapula(const G4String&,G4bool,G4bool){return;};
virtual void BuildRightScapula(const G4String&,G4bool,G4bool){return;};
virtual void SetModel(G4String) {return ;};
virtual void SetMotherVolume(G4VPhysicalVolume*) {return;};
virtual G4VPhysicalVolume* GetPhantom() {return 0;};
virtual void BuildLeftOvary(const G4String&,G4bool,G4bool ) {return ;};
virtual void BuildRightOvary(const G4String&,G4bool,G4bool) {return ;};
virtual void BuildUterus(const G4String&,G4bool,G4bool){return;};
virtual void BuildLeftBreast(const G4String&,G4bool,G4bool){return;};
virtual void BuildRightBreast(const G4String&,G4bool,G4bool){return;};
virtual void BuildVoxelLeftBreast(const G4String&,G4bool,G4bool){return;};
virtual void BuildVoxelRightBreast(const G4String&,G4bool,G4bool){return;};
};
#endif
examples/advanced/human_phantom/include/G4CustomFemaleBuilder.hh
+54
View File
@@ -0,0 +1,54 @@
//
// ********************************************************************
// * License and Disclaimer *
// * *
// * The Geant4 software is copyright of the Copyright Holders of *
// * the Geant4 Collaboration. It is provided under the terms and *
// * conditions of the Geant4 Software License, included in the file *
// * LICENSE and available at http://cern.ch/geant4/license . These *
// * include a list of copyright holders. *
// * *
// * Neither the authors of this software system, nor their employing *
// * institutes,nor the agencies providing financial support for this *
// * work make any representation or warranty, express or implied, *
// * regarding this software system or assume any liability for its *
// * use. Please see the license in the file LICENSE and URL above *
// * for the full disclaimer and the limitation of liability. *
// * *
// * This code implementation is the result of the scientific and *
// * technical work of the GEANT4 collaboration. *
// * By using, copying, modifying or distributing the software (or *
// * any work based on the software) you agree to acknowledge its *
// * use in resulting scientific publications, and indicate your *
// * acceptance of all terms of the Geant4 Software license. *
// ********************************************************************
//
// Authors: S. Guatelli and M. G. Pia, INFN Genova, Italy
//
// Based on code developed by the undergraduate student G. Guerrieri
// Note: this is a preliminary beta-version of the code; an improved
// version will be distributed in the next Geant4 public release, compliant
// with the design in a forthcoming publication, and subject to a
// design and code review.
//
#ifndef G4CustomFemaleBuilder_h
#define G4CustomFemaleBuilder_h 1
//#include "G4VPhysicalVolume.hh"
#include "G4PhantomBuilder.hh"
class G4CustomFemaleBuilder: public G4PhantomBuilder
{
public:
G4CustomFemaleBuilder();
~G4CustomFemaleBuilder();
void BuildVoxelLeftBreast(const G4String&, G4bool, G4bool);
void BuildVoxelRightBreast(const G4String&, G4bool, G4bool);
void BuildLeftOvary(const G4String&, G4bool, G4bool);
void BuildRightOvary(const G4String&, G4bool, G4bool);
void BuildUterus(const G4String&, G4bool, G4bool);
};
#endif
examples/advanced/human_phantom/include/G4FemaleBuilder.hh
+6 -11
View File
@@ -35,25 +35,20 @@
#ifndef G4FemaleBuilder_h
#define G4FemaleBuilder_h 1
#include "G4VPhysicalVolume.hh"
//#include "G4VPhysicalVolume.hh"
#include "G4PhantomBuilder.hh"
class G4PhantomBuilder;
class G4VPhysicalVolume;
class G4VBodyFactory;
class G4FemaleBuilder: public G4PhantomBuilder
{
public:
G4FemaleBuilder();
~G4FemaleBuilder();
void BuildBreast(G4bool sensitivity);
void BuildParameterisedBreast(G4bool sensitivity);
void BuildOvary(G4bool sensitivity);
void BuildUterus(G4bool sensitivity);
void BuildTestes(G4bool){;};
void BuildMaleGenitalia(G4bool){;};
void BuildLeftBreast(const G4String&, G4bool, G4bool);
void BuildRightBreast(const G4String&, G4bool, G4bool);
void BuildLeftOvary(const G4String&, G4bool, G4bool);
void BuildRightOvary(const G4String&, G4bool, G4bool);
void BuildUterus(const G4String&, G4bool, G4bool);
};
#endif
examples/advanced/human_phantom/include/G4HumanDummyLeftBreastSD.hh
+64
View File
@@ -0,0 +1,64 @@
//
// ********************************************************************
// * License and Disclaimer *
// * *
// * The Geant4 software is copyright of the Copyright Holders of *
// * the Geant4 Collaboration. It is provided under the terms and *
// * conditions of the Geant4 Software License, included in the file *
// * LICENSE and available at http://cern.ch/geant4/license . These *
// * include a list of copyright holders. *
// * *
// * Neither the authors of this software system, nor their employing *
// * institutes,nor the agencies providing financial support for this *
// * work make any representation or warranty, express or implied, *
// * regarding this software system or assume any liability for its *
// * use. Please see the license in the file LICENSE and URL above *
// * for the full disclaimer and the limitation of liability. *
// * *
// * This code implementation is the result of the scientific and *
// * technical work of the GEANT4 collaboration. *
// * By using, copying, modifying or distributing the software (or *
// * any work based on the software) you agree to acknowledge its *
// * use in resulting scientific publications, and indicate your *
// * acceptance of all terms of the Geant4 Software license. *
// ********************************************************************
//
// ********************************
// * *
// * G4HumanDummyLeftBreastSD.hh *
// * *
// ********************************
//
// Authors: S. Guatelli and M. G. Pia, INFN Genova, Italy
//
// Based on code developed by the undergraduate student G. Guerrieri
// Note: this is a preliminary beta-version of the code; an improved
// version will be distributed in the next Geant4 public release, compliant
// with the design in a forthcoming publication, and subject to a
// design and code review.
//
// Dummy sensitive used only to flag sensitivity in cells of RO geometry.
#ifndef G4HumanDummyLeftBreastSD_h
#define G4HumanDummyLeftBreastSD_h 1
#include "G4VSensitiveDetector.hh"
class G4Step;
class G4HumanDummyLeftBreastSD : public G4VSensitiveDetector
{
public:
G4HumanDummyLeftBreastSD();
~G4HumanDummyLeftBreastSD() {};
void Initialize(G4HCofThisEvent* ) {};
G4bool ProcessHits(G4Step* ,G4TouchableHistory*) {return false;}
void EndOfEvent(G4HCofThisEvent*) {};
void clear() {};
void DrawAll() {};
void PrintAll() {};
};
G4HumanDummyLeftBreastSD::G4HumanDummyLeftBreastSD() : G4VSensitiveDetector("dummyLeftBreastSD")
{}
#endif
examples/advanced/human_phantom/include/G4HumanDummySD.hh → examples/advanced/human_phantom/include/G4HumanDummyRightBreastSD.hh
+6 -6
View File
@@ -39,17 +39,17 @@
//
// Dummy sensitive used only to flag sensitivity in cells of RO geometry.
#ifndef G4HumanDummySD_h
#define G4HumanDummySD_h 1
#ifndef G4HumanDummyRightBreastSD_h
#define G4HumanDummyRightBreastSD_h 1
#include "G4VSensitiveDetector.hh"
class G4Step;
class G4HumanDummySD : public G4VSensitiveDetector
class G4HumanDummyRightBreastSD : public G4VSensitiveDetector
{
public:
G4HumanDummySD();
~G4HumanDummySD() {};
G4HumanDummyRightBreastSD();
~G4HumanDummyRightBreastSD() {};
void Initialize(G4HCofThisEvent* ) {};
G4bool ProcessHits(G4Step* ,G4TouchableHistory*) {return false;}
@@ -59,6 +59,6 @@ public:
void PrintAll() {};
};
G4HumanDummySD::G4HumanDummySD() : G4VSensitiveDetector("dummySD")
G4HumanDummyRightBreastSD::G4HumanDummyRightBreastSD() : G4VSensitiveDetector("dummyRightBreastSD")
{}
#endif
examples/advanced/human_phantom/include/G4HumanPhantomAnalysisManager.hh
+11 -15
View File
@@ -45,7 +45,9 @@
namespace AIDA
{
class ITree;
class IHistogramFactory;
class IHistogramFactory;
class ITupleFactory;
class ITuple;
class IAnalysisFactory;
class ITreeFactory;
};
@@ -53,17 +55,13 @@ namespace AIDA
class G4HumanPhantomAnalysisManager {
public:
~G4HumanPhantomAnalysisManager();
static G4HumanPhantomAnalysisManager* getInstance();
void book();
void particlePath(G4double);
void particleProjectionXY(G4double, G4double);
void particleProjectionYZ(G4double, G4double);
void particleProjectionZX(G4double, G4double);
void bodypartEnergyDep(G4double,G4double);
void innerBreastEnergyDep(G4int, G4int, G4double);
void bodyPartEnergyDeposit(G4int,G4double);
void voxelLeftBreastEnergyDeposit(G4int, G4int, G4double);
void voxelRightBreastEnergyDeposit(G4int, G4int, G4double);
void finish();
private:
@@ -73,13 +71,11 @@ private:
AIDA::IAnalysisFactory* aFact;
AIDA::ITreeFactory* treeFact;
AIDA::ITree* theTree;
AIDA::IHistogramFactory* histogramFactory;
AIDA::IHistogram1D* histogramParticlePath;
AIDA::IHistogram2D* projectionXY;
AIDA::IHistogram2D* projectionYZ;
AIDA::IHistogram2D* projectionZX;
AIDA::IHistogram2D* energy;
AIDA::IHistogram2D* innerBreast;
AIDA::IHistogramFactory* histogramFactory;
AIDA::ITupleFactory *tupFact;
AIDA::ITuple *ntuple;
AIDA::IHistogram2D* voxelLeftBreast;
AIDA::IHistogram2D* voxelRightBreast;
};
#endif
#endif
examples/advanced/human_phantom/include/G4HumanPhantomEnergyDeposit.hh → examples/advanced/human_phantom/include/G4HumanPhantomColour.hh
+26 -13
View File
@@ -31,23 +31,36 @@
// with the design in a forthcoming publication, and subject to a
// design and code review.
//
#ifndef G4HumanPhantomEnergyDeposit_H
#define G4HumanPhantomEnergyDeposit_H 1
// This class manages colours
//
#ifndef G4HumanPhantomColour_H
#define G4HumanPhantomColour_H 1
#include "globals.hh"
#include <map>
class G4HumanPhantomEnergyDeposit
{
class G4Colour;
class G4HumanPhantomColour
{
public:
G4HumanPhantomEnergyDeposit();
~G4HumanPhantomEnergyDeposit();
void Fill(G4String bodypartName, G4double energyDeposit);
void TotalEnergyDeposit();
G4HumanPhantomColour();
~G4HumanPhantomColour();
private:
std::map<std::string,G4double> energyTotal;
G4String bodypartName;
public:
//void DefineColour();
G4Colour GetColour(const G4String&); //returns the colour
private:
G4Colour white;
G4Colour pink;
G4Colour grey;
G4Colour yellow;
G4Colour blue;
G4Colour lightBlue;
G4Colour green;
G4Colour brown;
G4Colour purple;
G4Colour red;
G4Colour orange;
G4Colour black;
};
#endif
examples/advanced/human_phantom/include/G4HumanPhantomConstruction.hh
+5 -12
View File
@@ -41,35 +41,28 @@
#include <map>
class G4VPhysicalVolume;
//class G4LogicalVolume;
//class G4HumanPhantomSD;
class G4HumanPhantomMaterial;
//class G4PhantomBuilder;
class G4HumanPhantomEnergyDeposit;
class G4HumanPhantomConstruction : public G4VUserDetectorConstruction
{
public:
G4HumanPhantomConstruction(G4HumanPhantomEnergyDeposit*);
G4HumanPhantomConstruction();
~G4HumanPhantomConstruction();
G4VPhysicalVolume* Construct();
void SetBodyPartSensitivity(G4String, G4bool);
void CleanPhantom();
void UpdatePhantom();
void SetPhantomSex(G4String);
void SetPhantomModel(G4String);
G4VPhysicalVolume* GetMotherVolume(){return mother;};
//G4VPhysicalVolume* GetMotherVolume(){return mother;};
private:
G4HumanPhantomEnergyDeposit* edepTot;
G4HumanPhantomMaterial* material;
G4HumanPhantomMessenger* messenger;
G4VPhysicalVolume* mother;
G4VPhysicalVolume* ConstructWorld();
G4String model;
G4String sex;
G4HumanPhantomMaterial* material;
std::map<std::string,G4bool> sensitivities;
};
examples/advanced/human_phantom/include/G4HumanPhantomEventAction.hh
+15 -6
View File
@@ -36,17 +36,26 @@
#include "G4UserEventAction.hh"
#include "globals.hh"
#include <map>
class G4Event;
class G4HumanPhantomEventAction : public G4UserEventAction
{
public:
G4HumanPhantomEventAction();
~G4HumanPhantomEventAction();
public:
G4HumanPhantomEventAction();
~G4HumanPhantomEventAction();
public:
void BeginOfEventAction(const G4Event*);
void EndOfEventAction(const G4Event*);
public:
void BeginOfEventAction(const G4Event*);
void EndOfEventAction(const G4Event*);
private:
void Fill(G4String bodypartName, G4double energyDeposit);
void totalEventEnergyDeposit();
G4int hitCollectionID;
std::map<std::string,G4double> energyTotal;
G4String bodypartName;
};
#endif
examples/advanced/human_phantom/include/G4HumanPhantomHit.hh
+83
View File
@@ -0,0 +1,83 @@
//
// ********************************************************************
// * License and Disclaimer *
// * *
// * The Geant4 software is copyright of the Copyright Holders of *
// * the Geant4 Collaboration. It is provided under the terms and *
// * conditions of the Geant4 Software License, included in the file *
// * LICENSE and available at http://cern.ch/geant4/license . These *
// * include a list of copyright holders. *
// * *
// * Neither the authors of this software system, nor their employing *
// * institutes,nor the agencies providing financial support for this *
// * work make any representation or warranty, express or implied, *
// * regarding this software system or assume any liability for its *
// * use. Please see the license in the file LICENSE and URL above *
// * for the full disclaimer and the limitation of liability. *
// * *
// * This code implementation is the result of the scientific and *
// * technical work of the GEANT4 collaboration. *
// * By using, copying, modifying or distributing the software (or *
// * any work based on the software) you agree to acknowledge its *
// * use in resulting scientific publications, and indicate your *
// * acceptance of all terms of the Geant4 Software license. *
// ********************************************************************
//
//
// $Id: G4HumanPhantomHit.hh,v 1.10 2007/05/15 14:46:54 guatelli Exp $
// GEANT4 tag $Name: geant4-09-00 $
//
#ifndef G4HumanPhantomHit_h
#define G4HumanPhantomHit_h 1
#include "G4VHit.hh"
#include "G4THitsCollection.hh"
#include "G4Allocator.hh"
#include "G4ThreeVector.hh"
class G4HumanPhantomHit : public G4VHit
{
public:
G4HumanPhantomHit();
~G4HumanPhantomHit();
G4HumanPhantomHit(const G4HumanPhantomHit&);
const G4HumanPhantomHit& operator=(const G4HumanPhantomHit&);
G4int operator==(const G4HumanPhantomHit&) const;
inline void* operator new(size_t);
inline void operator delete(void*);
void Draw();
void Print();
public:
void SetBodyPartID (G4String bodyPartName) { bodyPartID = bodyPartName;};
void SetEdep (G4double de) { edep = de; };
G4String GetBodyPartID() { return bodyPartID; };
G4double GetEdep() { return edep; };
private:
G4String bodyPartID;
G4double edep;
};
typedef G4THitsCollection<G4HumanPhantomHit> G4HumanPhantomHitsCollection;
extern G4Allocator<G4HumanPhantomHit> G4HumanPhantomHitAllocator;
inline void* G4HumanPhantomHit::operator new(size_t)
{
void *aHit;
aHit = (void *) G4HumanPhantomHitAllocator.MallocSingle();
return aHit;
}
inline void G4HumanPhantomHit::operator delete(void *aHit)
{
G4HumanPhantomHitAllocator.FreeSingle((G4HumanPhantomHit*) aHit);
}
#endif
examples/advanced/human_phantom/include/G4HumanPhantomMessenger.hh
-1
View File
@@ -65,7 +65,6 @@ private:
G4UIcmdWithAString* sexCmd;
G4UIcmdWithAString* bodypartCmd;
G4UIcmdWithoutParameter* endCmd;
G4UIcmdWithoutParameter* cleanCmd;
G4String bodypart;
G4bool bps;
examples/advanced/human_phantom/include/G4HumanPhantomRunAction.hh
+7
View File
@@ -37,6 +37,7 @@
#include "G4UserRunAction.hh"
#include "globals.hh"
#include <map>
class G4HumanPhantomRunAction : public G4UserRunAction
{
@@ -47,6 +48,12 @@ class G4HumanPhantomRunAction : public G4UserRunAction
public:
void BeginOfRunAction(const G4Run*);
void EndOfRunAction(const G4Run*);
void Fill(G4String bodypartName, G4double energyDeposit);
private:
void totalRunEnergyDeposit();
std::map<std::string,G4double> energyTotal;
G4String bodypartName;
};
#endif
examples/advanced/human_phantom/include/G4HumanPhantomSD.hh
+5 -5
View File
@@ -35,22 +35,22 @@
#define G4HumanPhantomSD_h 1
#include "G4VSensitiveDetector.hh"
#include "G4HumanPhantomHit.hh"
class G4Step;
class G4HumanPhantomEnergyDeposit;
class G4HumanPhantomSD : public G4VSensitiveDetector
{
public:
G4HumanPhantomSD(G4String,G4HumanPhantomEnergyDeposit*);
G4HumanPhantomSD(G4String);
~G4HumanPhantomSD();
void Initialize(G4HCofThisEvent*);
G4bool ProcessHits(G4Step*, G4TouchableHistory*);
void EndOfEvent(G4HCofThisEvent*);
private:
G4HumanPhantomEnergyDeposit* energyTotal;
private:
G4HumanPhantomHitsCollection* collection;
};
#endif
examples/advanced/human_phantom/include/G4HumanPhantomSteppingAction.hh
-1
View File
@@ -43,7 +43,6 @@ class G4HumanPhantomSteppingAction : public G4UserSteppingAction
public:
G4HumanPhantomSteppingAction();
~G4HumanPhantomSteppingAction();
void UserSteppingAction(const G4Step*);
};
#endif
examples/advanced/human_phantom/include/G4MIRDBodyFactory.hh
+8 -49
View File
@@ -36,62 +36,21 @@
#define G4MIRDBodyFactory_h 1
#include "G4VBodyFactory.hh"
#include "G4VOrgan.hh"
#include <map>
class G4VBodyFactory;
class G4VPhysicalVolume;
class G4VOrgan;
class G4MIRDBodyFactory: public G4VBodyFactory
{
public:
G4MIRDBodyFactory();
~G4MIRDBodyFactory();
G4VPhysicalVolume* CreateHead(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateTrunk(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateLegs(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateUpperSpine(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateMiddleLowerSpine(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateLegBone(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateArmBone(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateSkull(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateRibCage(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreatePelvis(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateBreast(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateParameterisedBreast(G4VPhysicalVolume*,
G4String,G4bool);
G4VPhysicalVolume* CreateUterus(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateOvary(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateTestes(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateBrain(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateHeart(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateLung(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateStomach(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateUpperLargeIntestine(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateLowerLargeIntestine(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateKidney(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateAdrenal(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateLiver(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreatePancreas(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateSpleen(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateUrinaryBladder(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateThyroid(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateEsophagus(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateNeck(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateScapulae(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateClavicles(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateMaleGenitalia(G4VPhysicalVolume*,G4String,G4bool);
G4VPhysicalVolume* CreateOrgan(const G4String&, G4VPhysicalVolume*,
const G4String&,G4bool,G4bool);
private:
std::map<std::string,G4VOrgan*> organ;
};
#endif
examples/advanced/human_phantom/include/G4MIRDBrain.hh
+4 -3
View File
@@ -35,20 +35,21 @@
#define G4MIRDBrain_h 1
#include "G4VPhysicalVolume.hh"
#include "G4VOrgan.hh"
//#include "Saxana/SAXProcessor.h"
///#include "Saxana/ProcessingConfigurator.h"
class G4VPhysicalVolume;
class G4LogicalVolume;
class G4MIRDBrain
class G4MIRDBrain: public G4VOrgan
{
public:
G4MIRDBrain();
~G4MIRDBrain();
G4VPhysicalVolume* ConstructBrain(G4VPhysicalVolume*, G4String, G4bool);
G4VPhysicalVolume* Construct(const G4String&,G4VPhysicalVolume*,
const G4String&, G4bool, G4bool);
private:
//AXProcessor sxp;
examples/advanced/human_phantom/include/G4MIRDHead.hh
+4 -3
View File
@@ -35,7 +35,7 @@
#define G4MIRDHead_h 1
#include "G4VPhysicalVolume.hh"
#include "G4VOrgan.hh"
//##include "Saxana/SAXProcessor.h"
//#include "Saxana/ProcessingConfigurator.h"
@@ -43,13 +43,14 @@ class G4VPhysicalVolume;
class G4LogicalVolume;
class G4HumanPhantomMaterial;
class G4MIRDHead
class G4MIRDHead: public G4VOrgan
{
public:
G4MIRDHead();
~G4MIRDHead();
G4VPhysicalVolume* ConstructHead(G4VPhysicalVolume*, G4String, G4bool);
G4VPhysicalVolume* Construct(const G4String&, G4VPhysicalVolume*, const G4String&,
G4bool, G4bool);
private:
// SAXProcessor sxp;
examples/advanced/human_phantom/include/G4MIRDHeart.hh
+4 -3
View File
@@ -35,16 +35,17 @@
#define G4MIRDHeart_h 1
#include "G4VPhysicalVolume.hh"
#include "G4VOrgan.hh"
class G4VPhysicalVolume;
class G4LogicalVolume;
class G4MIRDHeart
class G4MIRDHeart:public G4VOrgan
{
public:
G4MIRDHeart();
~G4MIRDHeart();
G4VPhysicalVolume* ConstructHeart(G4VPhysicalVolume*, G4String, G4bool);
G4VPhysicalVolume* Construct(const G4String&,G4VPhysicalVolume*,
const G4String&, G4bool, G4bool);
};
#endif
examples/advanced/human_phantom/include/G4MIRDLeftAdrenal.hh
Executable
+51
View File
@@ -0,0 +1,51 @@
//
// ********************************************************************
// * License and Disclaimer *
// * *
// * The Geant4 software is copyright of the Copyright Holders of *
// * the Geant4 Collaboration. It is provided under the terms and *
// * conditions of the Geant4 Software License, included in the file *
// * LICENSE and available at http://cern.ch/geant4/license . These *
// * include a list of copyright holders. *
// * *
// * Neither the authors of this software system, nor their employing *
// * institutes,nor the agencies providing financial support for this *
// * work make any representation or warranty, express or implied, *
// * regarding this software system or assume any liability for its *
// * use. Please see the license in the file LICENSE and URL above *
// * for the full disclaimer and the limitation of liability. *
// * *
// * This code implementation is the result of the scientific and *
// * technical work of the GEANT4 collaboration. *
// * By using, copying, modifying or distributing the software (or *
// * any work based on the software) you agree to acknowledge its *
// * use in resulting scientific publications, and indicate your *
// * acceptance of all terms of the Geant4 Software license. *
// ********************************************************************
//
// Authors: S. Guatelli and M. G. Pia, INFN Genova, Italy
//
// Based on code developed by the undergraduate student G. Guerrieri
// Note: this is a preliminary beta-version of the code; an improved
// version will be distributed in the next Geant4 public release, compliant
// with the design in a forthcoming publication, and subject to a
// design and code review.
//
#ifndef G4MIRDLeftAdrenal_h
#define G4MIRDLeftAdrenal_h 1
#include "G4VPhysicalVolume.hh"
#include "G4VOrgan.hh"
class G4VPhysicalVolume;
class G4LogicalVolume;
class G4MIRDLeftAdrenal: public G4VOrgan
{
public:
G4MIRDLeftAdrenal();
~G4MIRDLeftAdrenal();
G4VPhysicalVolume* Construct(const G4String&,G4VPhysicalVolume*,
const G4String&,G4bool, G4bool);
};
#endif
examples/advanced/human_phantom/include/G4MIRDArmBone.hh → examples/advanced/human_phantom/include/G4MIRDLeftArmBone.hh
+7 -7
View File
@@ -32,22 +32,22 @@
// design and code review.
//
#ifndef G4MIRDArmBone_h
#define G4MIRDArmBone_h 1
#ifndef G4MIRDLeftArmBone_h
#define G4MIRDLeftArmBone_h 1
#include "G4VPhysicalVolume.hh"
#include "G4VOrgan.hh"
class G4VPhysicalVolume;
class G4LogicalVolume;
class G4MIRDArmBone
class G4MIRDLeftArmBone: public G4VOrgan
{
public:
G4MIRDLeftArmBone();
~G4MIRDLeftArmBone();
G4MIRDArmBone();
~G4MIRDArmBone();
G4VPhysicalVolume* ConstructArmBone(G4VPhysicalVolume*, G4String, G4bool);
G4VPhysicalVolume* Construct(const G4String&,G4VPhysicalVolume*, const G4String&, G4bool, G4bool);
private:
// SAXProcessor sxp;
examples/advanced/human_phantom/include/G4MIRDLeftBreast.hh
+52
View File
@@ -0,0 +1,52 @@
//
// ********************************************************************
// * License and Disclaimer *
// * *
// * The Geant4 software is copyright of the Copyright Holders of *
// * the Geant4 Collaboration. It is provided under the terms and *
// * conditions of the Geant4 Software License, included in the file *
// * LICENSE and available at http://cern.ch/geant4/license . These *
// * include a list of copyright holders. *
// * *
// * Neither the authors of this software system, nor their employing *
// * institutes,nor the agencies providing financial support for this *
// * work make any representation or warranty, express or implied, *
// * regarding this software system or assume any liability for its *
// * use. Please see the license in the file LICENSE and URL above *
// * for the full disclaimer and the limitation of liability. *
// * *
// * This code implementation is the result of the scientific and *
// * technical work of the GEANT4 collaboration. *
// * By using, copying, modifying or distributing the software (or *
// * any work based on the software) you agree to acknowledge its *
// * use in resulting scientific publications, and indicate your *
// * acceptance of all terms of the Geant4 Software license. *
// ********************************************************************
//
// Authors: S. Guatelli and M. G. Pia, INFN Genova, Italy
//
// Based on code developed by the undergraduate student G. Guerrieri
// Note: this is a preliminary beta-version of the code; an improved
// version will be distributed in the next Geant4 public release, compliant
// with the design in a forthcoming publication, and subject to a
// design and code review.
//
#ifndef G4MIRDLeftBreast_h
#define G4MIRDLeftBreast_h 1
#include "G4VPhysicalVolume.hh"
#include "G4VOrgan.hh"
class G4VPhysicalVolume;
class G4LogicalVolume;
class G4MIRDLeftBreast: public G4VOrgan
{
public:
G4MIRDLeftBreast();
~G4MIRDLeftBreast();
G4VPhysicalVolume* Construct(const G4String&,G4VPhysicalVolume*,
const G4String&, G4bool, G4bool);
};
#endif
examples/advanced/human_phantom/include/G4MIRDLeftKidney.hh
+51
View File
@@ -0,0 +1,51 @@
//
// ********************************************************************
// * License and Disclaimer *
// * *
// * The Geant4 software is copyright of the Copyright Holders of *
// * the Geant4 Collaboration. It is provided under the terms and *
// * conditions of the Geant4 Software License, included in the file *
// * LICENSE and available at http://cern.ch/geant4/license . These *
// * include a list of copyright holders. *
// * *
// * Neither the authors of this software system, nor their employing *
// * institutes,nor the agencies providing financial support for this *
// * work make any representation or warranty, express or implied, *
// * regarding this software system or assume any liability for its *
// * use. Please see the license in the file LICENSE and URL above *
// * for the full disclaimer and the limitation of liability. *
// * *
// * This code implementation is the result of the scientific and *
// * technical work of the GEANT4 collaboration. *
// * By using, copying, modifying or distributing the software (or *
// * any work based on the software) you agree to acknowledge its *
// * use in resulting scientific publications, and indicate your *
// * acceptance of all terms of the Geant4 Software license. *
// ********************************************************************
//
// Authors: S. Guatelli and M. G. Pia, INFN Genova, Italy
//
// Based on code developed by the undergraduate student G. Guerrieri
// Note: this is a preliminary beta-version of the code; an improved
// version will be distributed in the next Geant4 public release, compliant
// with the design in a forthcoming publication, and subject to a
// design and code review.
//
#ifndef G4MIRDLeftKidney_h
#define G4MIRDLeftKidney_h 1
#include "G4VPhysicalVolume.hh"
#include "G4VOrgan.hh"
class G4VPhysicalVolume;
class G4LogicalVolume;
class G4MIRDLeftKidney: public G4VOrgan
{
public:
G4MIRDLeftKidney();
~G4MIRDLeftKidney();
G4VPhysicalVolume* Construct(const G4String&,G4VPhysicalVolume*,
const G4String&,G4bool, G4bool);
};
#endif
examples/advanced/human_phantom/include/G4MIRDLegs.hh → examples/advanced/human_phantom/include/G4MIRDLeftLeg.hh
+8 -7
View File
@@ -31,20 +31,21 @@
// with the design in a forthcoming publication, and subject to a
// design and code review.
//
#ifndef G4MIRDLegs_h
#define G4MIRDLegs_h 1
#ifndef G4MIRDLeftLeg_h
#define G4MIRDLeftLeg_h 1
#include "G4VPhysicalVolume.hh"
#include "G4VOrgan.hh"
class G4VPhysicalVolume;
class G4LogicalVolume;
class G4MIRDLegs
class G4MIRDLeftLeg:public G4VOrgan
{
public:
G4MIRDLegs();
~G4MIRDLegs();
G4VPhysicalVolume* ConstructLegs(G4VPhysicalVolume*, G4String, G4bool);
G4MIRDLeftLeg();
~G4MIRDLeftLeg();
G4VPhysicalVolume* Construct(const G4String&,G4VPhysicalVolume*,
const G4String&, G4bool, G4bool);
};
#endif
examples/advanced/human_phantom/include/G4MIRDLeftLegBone.hh
+51
View File
@@ -0,0 +1,51 @@
//
// ********************************************************************
// * License and Disclaimer *
// * *
// * The Geant4 software is copyright of the Copyright Holders of *
// * the Geant4 Collaboration. It is provided under the terms and *
// * conditions of the Geant4 Software License, included in the file *
// * LICENSE and available at http://cern.ch/geant4/license . These *
// * include a list of copyright holders. *
// * *
// * Neither the authors of this software system, nor their employing *
// * institutes,nor the agencies providing financial support for this *
// * work make any representation or warranty, express or implied, *
// * regarding this software system or assume any liability for its *
// * use. Please see the license in the file LICENSE and URL above *
// * for the full disclaimer and the limitation of liability. *
// * *
// * This code implementation is the result of the scientific and *
// * technical work of the GEANT4 collaboration. *
// * By using, copying, modifying or distributing the software (or *
// * any work based on the software) you agree to acknowledge its *
// * use in resulting scientific publications, and indicate your *
// * acceptance of all terms of the Geant4 Software license. *
// ********************************************************************
//
// Authors: S. Guatelli and M. G. Pia, INFN Genova, Italy
//
// Based on code developed by the undergraduate student G. Guerrieri
// Note: this is a preliminary beta-version of the code; an improved
// version will be distributed in the next Geant4 public release, compliant
// with the design in a forthcoming publication, and subject to a
// design and code review.
//
#ifndef G4MIRDLeftLegBone_h
#define G4MIRDLeftLegBone_h 1
#include "G4VPhysicalVolume.hh"
#include "G4VOrgan.hh"
class G4VPhysicalVolume;
class G4LogicalVolume;
class G4MIRDLeftLegBone: public G4VOrgan
{
public:
G4MIRDLeftLegBone();
~G4MIRDLeftLegBone();
G4VPhysicalVolume* Construct(const G4String&,G4VPhysicalVolume*,
const G4String&, G4bool, G4bool);
};
#endif
examples/advanced/human_phantom/include/G4MIRDLung.hh → examples/advanced/human_phantom/include/G4MIRDLeftLung.hh
+8 -6
View File
@@ -31,21 +31,23 @@
// with the design in a forthcoming publication, and subject to a
// design and code review.
//
#ifndef G4MIRDLung_h
#define G4MIRDLung_h 1
#ifndef G4MIRDLeftLung_h
#define G4MIRDLeftLung_h 1
#include "G4VPhysicalVolume.hh"
#include "G4VOrgan.hh"
class G4VPhysicalVolume;
class G4LogicalVolume;
class G4MIRDLung
class G4MIRDLeftLung: public G4VOrgan
{
public:
G4MIRDLung();
~G4MIRDLung();
G4VPhysicalVolume* ConstructLung(G4VPhysicalVolume*, G4String, G4bool);
G4MIRDLeftLung();
~G4MIRDLeftLung();
G4VPhysicalVolume* Construct(const G4String&, G4VPhysicalVolume*,
const G4String&,G4bool, G4bool);
};
#endif
examples/advanced/human_phantom/include/G4MIRDKidney.hh → examples/advanced/human_phantom/include/G4MIRDLeftOvary.hh
+9 -7
View File
@@ -31,20 +31,22 @@
// with the design in a forthcoming publication, and subject to a
// design and code review.
//
#ifndef G4MIRDKidney_h
#define G4MIRDKidney_h 1
#ifndef G4MIRDLeftOvary_h
#define G4MIRDLeftOvary_h 1
#include "G4VPhysicalVolume.hh"
#include "G4VOrgan.hh"
class G4VPhysicalVolume;
class G4LogicalVolume;
class G4MIRDKidney
class G4MIRDLeftOvary: public G4VOrgan
{
public:
G4MIRDKidney();
~G4MIRDKidney();
G4VPhysicalVolume* ConstructKidney(G4VPhysicalVolume*, G4String, G4bool);
G4MIRDLeftOvary();
~G4MIRDLeftOvary();
G4VPhysicalVolume* Construct(const G4String&, G4VPhysicalVolume*,
const G4String&, G4bool, G4bool);
};
#endif
examples/advanced/human_phantom/include/G4MIRDLeftScapula.hh
Executable
+51
View File
@@ -0,0 +1,51 @@
//
// ********************************************************************
// * License and Disclaimer *
// * *
// * The Geant4 software is copyright of the Copyright Holders of *
// * the Geant4 Collaboration. It is provided under the terms and *
// * conditions of the Geant4 Software License, included in the file *
// * LICENSE and available at http://cern.ch/geant4/license . These *
// * include a list of copyright holders. *
// * *
// * Neither the authors of this software system, nor their employing *
// * institutes,nor the agencies providing financial support for this *
// * work make any representation or warranty, express or implied, *
// * regarding this software system or assume any liability for its *
// * use. Please see the license in the file LICENSE and URL above *
// * for the full disclaimer and the limitation of liability. *
// * *
// * This code implementation is the result of the scientific and *
// * technical work of the GEANT4 collaboration. *
// * By using, copying, modifying or distributing the software (or *
// * any work based on the software) you agree to acknowledge its *
// * use in resulting scientific publications, and indicate your *
// * acceptance of all terms of the Geant4 Software license. *
// ********************************************************************
//
// Authors: S. Guatelli and M. G. Pia, INFN Genova, Italy
//
// Based on code developed by the undergraduate student G. Guerrieri
// Note: this is a preliminary beta-version of the code; an improved
// version will be distributed in the next Geant4 public release, compliant
// with the design in a forthcoming publication, and subject to a
// design and code review.
//
#ifndef G4MIRDLeftScapula_h
#define G4MIRDLeftScapula_h 1
#include "G4VPhysicalVolume.hh"
#include "G4VOrgan.hh"
class G4VPhysicalVolume;
class G4LogicalVolume;
class G4MIRDLeftScapula:public G4VOrgan
{
public:
G4MIRDLeftScapula();
~G4MIRDLeftScapula();
G4VPhysicalVolume* Construct(const G4String&,G4VPhysicalVolume*,
const G4String&, G4bool, G4bool);
};
#endif
examples/advanced/human_phantom/include/G4MIRDLiver.hh
+4 -4
View File
@@ -35,17 +35,17 @@
#define G4MIRDLiver_h 1
#include "G4VPhysicalVolume.hh"
#include "G4VOrgan.hh"
class G4VPhysicalVolume;
class G4LogicalVolume;
class G4MIRDLiver
class G4MIRDLiver: public G4VOrgan
{
public:
G4MIRDLiver();
~G4MIRDLiver();
G4VPhysicalVolume* ConstructLiver(G4VPhysicalVolume*, G4String, G4bool);
G4VPhysicalVolume* Construct(const G4String&,G4VPhysicalVolume*,
const G4String&, G4bool, G4bool);
};
#endif
examples/advanced/human_phantom/include/G4MIRDLowerLargeIntestine.hh
+4 -3
View File
@@ -35,16 +35,17 @@
#define G4MIRDLowerLargeIntestine_h 1
#include "G4VPhysicalVolume.hh"
#include "G4VOrgan.hh"
class G4VPhysicalVolume;
class G4LogicalVolume;
class G4MIRDLowerLargeIntestine
class G4MIRDLowerLargeIntestine: public G4VOrgan
{
public:
G4MIRDLowerLargeIntestine();
~G4MIRDLowerLargeIntestine();
G4VPhysicalVolume* ConstructLowerLargeIntestine(G4VPhysicalVolume*, G4String, G4bool);
G4VPhysicalVolume* Construct(const G4String&,G4VPhysicalVolume*,
const G4String&, G4bool, G4bool);
};
#endif
examples/advanced/human_phantom/include/G4MIRDMiddleLowerSpine.hh
+4 -2
View File
@@ -35,17 +35,19 @@
#define G4MIRDMiddleLowerSpine_h 1
#include "G4VPhysicalVolume.hh"
#include "G4VOrgan.hh"
class G4VPhysicalVolume;
class G4LogicalVolume;
class G4MIRDMiddleLowerSpine
class G4MIRDMiddleLowerSpine: public G4VOrgan
{
public:
G4MIRDMiddleLowerSpine();
~G4MIRDMiddleLowerSpine();
G4VPhysicalVolume* ConstructMiddleLowerSpine(G4VPhysicalVolume*, G4String, G4bool);
G4VPhysicalVolume* Construct(const G4String&,G4VPhysicalVolume*,
const G4String&, G4bool, G4bool);
private:
};
examples/advanced/human_phantom/include/G4MIRDPancreas.hh
+4 -3
View File
@@ -35,20 +35,21 @@
#define G4MIRDPancreas_h 1
#include "G4VPhysicalVolume.hh"
#include "G4VOrgan.hh"
//#include "Saxana/SAXProcessor.h"
//#include "Saxana/ProcessingConfigurator.h"
class G4VPhysicalVolume;
class G4LogicalVolume;
class G4MIRDPancreas
class G4MIRDPancreas: public G4VOrgan
{
public:
G4MIRDPancreas();
~G4MIRDPancreas();
G4VPhysicalVolume* ConstructPancreas(G4VPhysicalVolume*, G4String, G4bool);
G4VPhysicalVolume* Construct(const G4String&,G4VPhysicalVolume*,
const G4String&, G4bool, G4bool);
private:
// SAXProcessor sxp;
examples/advanced/human_phantom/include/G4MIRDPelvis.hh
+4 -3
View File
@@ -35,16 +35,17 @@
#define G4MIRDPelvis_h 1
#include "G4VPhysicalVolume.hh"
#include "G4VOrgan.hh"
class G4VPhysicalVolume;
class G4LogicalVolume;
class G4MIRDPelvis
class G4MIRDPelvis: public G4VOrgan
{
public:
G4MIRDPelvis();
~G4MIRDPelvis();
G4VPhysicalVolume* ConstructPelvis(G4VPhysicalVolume*, G4String, G4bool);
G4VPhysicalVolume* Construct(const G4String&,G4VPhysicalVolume*,
const G4String&, G4bool, G4bool);
};
#endif
examples/advanced/human_phantom/include/G4MIRDRibCage.hh
+17 -9
View File
@@ -35,24 +35,32 @@
#define G4MIRDRibCage_h 1
#include "G4VPhysicalVolume.hh"
#include "Saxana/SAXProcessor.h"
#include "Saxana/ProcessingConfigurator.h"
#include "G4VOrgan.hh"
class G4VPhysicalVolume;
class G4LogicalVolume;
class G4MIRDRibCage
class G4MIRDRibCage: public G4VOrgan
{
public:
G4MIRDRibCage();
~G4MIRDRibCage();
G4VPhysicalVolume* ConstructRibCage(G4VPhysicalVolume*, G4String, G4bool);
private:
SAXProcessor sxp;
ProcessingConfigurator config;
G4VPhysicalVolume* Construct(const G4String&,G4VPhysicalVolume*,
const G4String&, G4bool, G4bool);
private:
G4VPhysicalVolume* physRib1;
G4VPhysicalVolume* physRib2;
G4VPhysicalVolume* physRib3;
G4VPhysicalVolume* physRib4;
G4VPhysicalVolume* physRib5;
G4VPhysicalVolume* physRib6;
G4VPhysicalVolume* physRib7;
G4VPhysicalVolume* physRib8;
G4VPhysicalVolume* physRib9;
G4VPhysicalVolume* physRib10;
G4VPhysicalVolume* physRib11;
G4VPhysicalVolume* physRib12;
};
#endif
examples/advanced/human_phantom/include/G4MIRDRightAdrenal.hh
Executable
+51
View File
@@ -0,0 +1,51 @@
//
// ********************************************************************
// * License and Disclaimer *
// * *
// * The Geant4 software is copyright of the Copyright Holders of *
// * the Geant4 Collaboration. It is provided under the terms and *
// * conditions of the Geant4 Software License, included in the file *
// * LICENSE and available at http://cern.ch/geant4/license . These *
// * include a list of copyright holders. *
// * *
// * Neither the authors of this software system, nor their employing *
// * institutes,nor the agencies providing financial support for this *
// * work make any representation or warranty, express or implied, *
// * regarding this software system or assume any liability for its *
// * use. Please see the license in the file LICENSE and URL above *
// * for the full disclaimer and the limitation of liability. *
// * *
// * This code implementation is the result of the scientific and *
// * technical work of the GEANT4 collaboration. *
// * By using, copying, modifying or distributing the software (or *
// * any work based on the software) you agree to acknowledge its *
// * use in resulting scientific publications, and indicate your *
// * acceptance of all terms of the Geant4 Software license. *
// ********************************************************************
//
// Authors: S. Guatelli and M. G. Pia, INFN Genova, Italy
//
// Based on code developed by the undergraduate student G. Guerrieri
// Note: this is a preliminary beta-version of the code; an improved
// version will be distributed in the next Geant4 public release, compliant
// with the design in a forthcoming publication, and subject to a
// design and code review.
//
#ifndef G4MIRDRightAdrenal_h
#define G4MIRDRightAdrenal_h 1
#include "G4VPhysicalVolume.hh"
#include "G4VOrgan.hh"
class G4VPhysicalVolume;
class G4LogicalVolume;
class G4MIRDRightAdrenal: public G4VOrgan
{
public:
G4MIRDRightAdrenal();
~G4MIRDRightAdrenal();
G4VPhysicalVolume* Construct(const G4String&,G4VPhysicalVolume*,
const G4String&,G4bool, G4bool);
};
#endif

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