Import Geant4 10.3.0 source tree
This commit is contained in:
Gabriele Cosmo
+101
-101
@@ -26,12 +26,12 @@ Double_t scale;
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c1 = new TCanvas ("c1","",20,20,1200,900);
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c1.Divide(4,3);
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c1->Divide(4,3);
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//*********************
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// INTENSITY HISTOGRAMS
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//*********************
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jump:
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FILE * fp = fopen("phantom.dat","r");
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Float_t xVox, yVox, zVox, tmp, den, dose;
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@@ -50,8 +50,8 @@ TNtuple *ntupleYXN = new TNtuple("NUCLEUS","ntuple","Y:X:vox");
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TNtuple *ntupleZX = new TNtuple("CYTOPLASM","ntuple","Z:X:vox");
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TNtuple *ntupleYX = new TNtuple("CYTOPLASM","ntuple","Y:X:vox");
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nlines=0;
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ncols=0;
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Int_t nlines=0;
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Int_t ncols=0;
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while (1)
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{
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@@ -85,7 +85,7 @@ fclose(fp);
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// HISTO NUCLEUS
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c1.cd(1);
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c1->cd(1);
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h1->Draw();
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h1->GetXaxis()->SetLabelSize(0.025);
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h1->GetYaxis()->SetLabelSize(0.025);
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@@ -104,7 +104,7 @@ c1.cd(1);
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// HISTO CYTOPLASM
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c1.cd(5);
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c1->cd(5);
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h2->Draw();
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h2->GetXaxis()->SetLabelSize(0.025);
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h2->GetYaxis()->SetLabelSize(0.025);
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@@ -132,7 +132,7 @@ gROOT->SetStyle("Plain");
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//CYTOPLASM
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c1.cd(7); // axe YX
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c1->cd(7); // axe YX
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TH2F *hist = new TH2F("hist","hist",50,-20,20,50,-20,20);
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ntupleYX->Draw("Y:X>>hist","vox","colz");
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gPad->SetLogz();
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@@ -144,27 +144,27 @@ c1.cd(7); // axe YX
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hist->GetYaxis()->SetTitleSize(0.035);
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hist->GetXaxis()->SetTitleOffset(1.4);
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hist->GetYaxis()->SetTitleOffset(1.4);
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hist->GetXaxis()->SetTitle("Y (µm)");
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hist->GetYaxis()->SetTitle("X (µm)");
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hist->GetXaxis()->SetTitle("Y (um)");
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hist->GetYaxis()->SetTitle("X (um)");
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hist->SetTitle("Cytoplasm intensity on transverse section");
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//NUCLEUS
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c1.cd(3); // axe YX
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TH2F *hist = new TH2F("hist","hist",50,-20,20,50,-20,20);
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ntupleYXN->Draw("Y:X>>hist","vox","colz");
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c1->cd(3); // axe YX
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TH2F *hist2 = new TH2F("hist2","hist2",50,-20,20,50,-20,20);
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ntupleYXN->Draw("Y:X>>hist2","vox","colz");
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gPad->SetLogz();
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hist->Draw("colz");
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hist->GetXaxis()->SetLabelSize(0.025);
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hist->GetYaxis()->SetLabelSize(0.025);
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hist->GetZaxis()->SetLabelSize(0.025);
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hist->GetXaxis()->SetTitleSize(0.035);
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hist->GetYaxis()->SetTitleSize(0.035);
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hist->GetXaxis()->SetTitleOffset(1.4);
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hist->GetYaxis()->SetTitleOffset(1.4);
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hist->GetXaxis()->SetTitle("Y (µm)");
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hist->GetYaxis()->SetTitle("X (µm)");
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hist->SetTitle("Nucleus intensity on transverse section");
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hist2->Draw("colz");
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hist2->GetXaxis()->SetLabelSize(0.025);
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hist2->GetYaxis()->SetLabelSize(0.025);
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hist2->GetZaxis()->SetLabelSize(0.025);
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hist2->GetXaxis()->SetTitleSize(0.035);
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hist2->GetYaxis()->SetTitleSize(0.035);
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hist2->GetXaxis()->SetTitleOffset(1.4);
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hist2->GetYaxis()->SetTitleOffset(1.4);
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hist2->GetXaxis()->SetTitle("Y (um)");
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hist2->GetYaxis()->SetTitle("X (um)");
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hist2->SetTitle("Nucleus intensity on transverse section");
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//
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@@ -179,38 +179,38 @@ TNtuple* ntuple2;
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TNtuple* ntuple3;
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TNtuple* ntuple4;
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ntuple0 = (TNtuple*)f->Get("ntuple0");
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ntuple1 = (TNtuple*)f->Get("ntuple1");
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ntuple2 = (TNtuple*)f->Get("ntuple2");
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ntuple3 = (TNtuple*)f->Get("ntuple3");
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ntuple4 = (TNtuple*)f->Get("ntuple4");
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ntuple0 = (TNtuple*)f.Get("ntuple0");
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ntuple1 = (TNtuple*)f.Get("ntuple1");
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ntuple2 = (TNtuple*)f.Get("ntuple2");
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ntuple3 = (TNtuple*)f.Get("ntuple3");
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ntuple4 = (TNtuple*)f.Get("ntuple4");
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TH1F *h1 = new TH1F("h1","Dose distribution in Nucleus",100,0.001,1.);
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TH1F *h10 = new TH1F("h10","Dose distribution in Cytoplasm",100,0.001,.2);
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TH1F *h1bis = new TH1F("h1bis","Dose distribution in Nucleus",100,0.001,1.);
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TH1F *h10 = new TH1F("h10bis","Dose distribution in Cytoplasm",100,0.001,.2);
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c1.cd(2);
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c1->cd(2);
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ntuple3->Project("h1","doseN");
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scale = 1/h1->Integral();
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h1->Scale(scale);
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h1->Draw();
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h1->GetXaxis()->SetLabelSize(0.025);
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h1->GetYaxis()->SetLabelSize(0.025);
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h1->GetXaxis()->SetTitleSize(0.035);
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h1->GetYaxis()->SetTitleSize(0.035);
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h1->GetXaxis()->SetTitleOffset(1.4);
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h1->GetYaxis()->SetTitleOffset(1.4);
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h1->GetXaxis()->SetTitle("Absorbed dose (Gy)");
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h1->GetYaxis()->SetTitle("Fraction of events");
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h1->SetLineColor(3);
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h1->SetFillColor(3);
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ntuple3->Project("h1bis","doseN");
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scale = 1/h1bis->Integral();
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h1bis->Scale(scale);
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h1bis->Draw();
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h1bis->GetXaxis()->SetLabelSize(0.025);
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h1bis->GetYaxis()->SetLabelSize(0.025);
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h1bis->GetXaxis()->SetTitleSize(0.035);
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h1bis->GetYaxis()->SetTitleSize(0.035);
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h1bis->GetXaxis()->SetTitleOffset(1.4);
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h1bis->GetYaxis()->SetTitleOffset(1.4);
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h1bis->GetXaxis()->SetTitle("Absorbed dose (Gy)");
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h1bis->GetYaxis()->SetTitle("Fraction of events");
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h1bis->SetLineColor(3);
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h1bis->SetFillColor(3);
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//*****************
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// DOSE IN CYTOPLASM
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//*****************
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c1.cd(6);
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ntuple3->Project("h10","doseC");
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c1->cd(6);
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ntuple3->Project("h10bis","doseC");
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scale = 1/h10->Integral();
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h10->Scale(scale);
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h10->Draw();
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@@ -236,27 +236,27 @@ gROOT->SetStyle("Plain");
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Float_t d;
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TH1F *h2 = new TH1F("h2","Beam stopping power at cell entrance",200,0,300);
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TH1F *h2bis = new TH1F("h2bis","Beam stopping power at cell entrance",200,0,300);
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c1.cd(9);
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ntuple0->Project("h2","sp");
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scale = 1/h2->Integral();
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h2->Scale(scale);
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h2->Draw();
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h2->GetXaxis()->SetLabelSize(0.025);
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h2->GetYaxis()->SetLabelSize(0.025);
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h2->GetXaxis()->SetTitleSize(0.035);
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h2->GetYaxis()->SetTitleSize(0.035);
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h2->GetXaxis()->SetTitleOffset(1.4);
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h2->GetYaxis()->SetTitleOffset(1.4);
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h2->GetXaxis()->SetTitle("dE/dx (keV/µm)");
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h2->GetYaxis()->SetTitle("Fraction of events");
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h2->SetTitle("dE/dx at cell entrance");
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h2->SetFillColor(4);
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h2->SetLineColor(4);
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h2->Fit("gaus");
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c1->cd(9);
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ntuple0->Project("h2bis","sp");
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scale = 1/h2bis->Integral();
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h2bis->Scale(scale);
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h2bis->Draw();
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h2bis->GetXaxis()->SetLabelSize(0.025);
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h2bis->GetYaxis()->SetLabelSize(0.025);
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h2bis->GetXaxis()->SetTitleSize(0.035);
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h2bis->GetYaxis()->SetTitleSize(0.035);
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h2bis->GetXaxis()->SetTitleOffset(1.4);
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h2bis->GetYaxis()->SetTitleOffset(1.4);
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h2bis->GetXaxis()->SetTitle("dE/dx (keV/um)");
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h2bis->GetYaxis()->SetTitle("Fraction of events");
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h2bis->SetTitle("dE/dx at cell entrance");
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h2bis->SetFillColor(4);
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h2bis->SetLineColor(4);
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h2bis->Fit("gaus");
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gaus->SetLineColor(6);
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h2->Fit("gaus");
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h2bis->Fit("gaus");
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//**************
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@@ -295,7 +295,7 @@ for (Int_t i=0;i<nentries;i++)
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ntupleR->Fill(Z2,Y2,X2);
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}
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c1.cd(10);
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c1->cd(10);
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ntupleR->Draw("X2:Z2","abs(X2)<50","surf3");
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gPad->SetLogz();
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/*
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@@ -321,38 +321,38 @@ gStyle->SetOptFit();
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gStyle->SetPalette(1);
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gROOT->SetStyle("Plain");
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c1.cd(11);
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TH2F *hist = new TH2F("hist","hist",50,-20,20,50,-20,20);
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ntuple4->Draw("y*0.359060:x*0.359060>>hist","doseV","contz");
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c1->cd(11);
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TH2F *histbis = new TH2F("histbis","histbis",50,-20,20,50,-20,20);
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ntuple4->Draw("y*0.359060:x*0.359060>>histbis","doseV","contz");
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gPad->SetLogz();
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hist->Draw("contz");
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hist->GetXaxis()->SetLabelSize(0.025);
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hist->GetYaxis()->SetLabelSize(0.025);
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hist->GetZaxis()->SetLabelSize(0.025);
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hist->GetXaxis()->SetTitleSize(0.035);
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hist->GetYaxis()->SetTitleSize(0.035);
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hist->GetXaxis()->SetTitleOffset(1.4);
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hist->GetYaxis()->SetTitleOffset(1.4);
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hist->GetXaxis()->SetTitle("Y (µm)");
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hist->GetYaxis()->SetTitle("X (µm)");
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hist->SetTitle("Mean energy deposit -transverse- (z axis in eV)");
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histbis->Draw("contz");
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histbis->GetXaxis()->SetLabelSize(0.025);
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histbis->GetYaxis()->SetLabelSize(0.025);
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histbis->GetZaxis()->SetLabelSize(0.025);
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histbis->GetXaxis()->SetTitleSize(0.035);
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histbis->GetYaxis()->SetTitleSize(0.035);
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histbis->GetXaxis()->SetTitleOffset(1.4);
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histbis->GetYaxis()->SetTitleOffset(1.4);
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histbis->GetXaxis()->SetTitle("Y (um)");
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histbis->GetYaxis()->SetTitle("X (um)");
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histbis->SetTitle("Mean energy deposit -transverse- (z axis in eV)");
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c1.cd(12);
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TH2F *hist = new TH2F("hist","hist",50,-20,20,50,-20,20);
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ntuple4->Draw("x*0.359060:(z+1500/0.162810+21)*0.162810>>hist","doseV","contz");
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c1->cd(12);
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TH2F *histter = new TH2F("histter","histter",50,-20,20,50,-20,20);
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ntuple4->Draw("x*0.359060:(z+1500/0.162810+21)*0.162810>>histter","doseV","contz");
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gPad->SetLogz();
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hist->Draw("contz");
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hist->GetXaxis()->SetLabelSize(0.025);
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hist->GetYaxis()->SetLabelSize(0.025);
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hist->GetZaxis()->SetLabelSize(0.025);
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hist->GetXaxis()->SetTitleSize(0.035);
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hist->GetYaxis()->SetTitleSize(0.035);
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hist->GetXaxis()->SetTitleOffset(1.4);
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hist->GetYaxis()->SetTitleOffset(1.4);
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hist->GetXaxis()->SetTitle("Z (µm)");
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hist->GetYaxis()->SetTitle("X (µm)");
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hist->SetTitle("Mean energy deposit -longitudinal- (z axis in eV)");
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histter->Draw("contz");
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histter->GetXaxis()->SetLabelSize(0.025);
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histter->GetYaxis()->SetLabelSize(0.025);
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histter->GetZaxis()->SetLabelSize(0.025);
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histter->GetXaxis()->SetTitleSize(0.035);
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histter->GetYaxis()->SetTitleSize(0.035);
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histter->GetXaxis()->SetTitleOffset(1.4);
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histter->GetYaxis()->SetTitleOffset(1.4);
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histter->GetXaxis()->SetTitle("Z (um)");
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histter->GetYaxis()->SetTitle("X (um)");
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histter->SetTitle("Mean energy deposit -longitudinal- (z axis in eV)");
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//*******************************
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// BEAM POSITION AT CELL ENTRANCE
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@@ -366,7 +366,7 @@ gROOT->SetStyle("Plain");
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TH1F *h77 = new TH1F("hx","h1",200,-10,10);
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TH1F *h88 = new TH1F("hy","h1",200,-10,10);
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c1.cd(4);
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c1->cd(4);
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ntuple1->Project("hx","x");
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scale = 1/h77->Integral();
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h77->Scale(scale);
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@@ -377,15 +377,15 @@ c1.cd(4);
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h77->GetYaxis()->SetTitleSize(0.035);
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h77->GetXaxis()->SetTitleOffset(1.4);
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h77->GetYaxis()->SetTitleOffset(1.4);
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h77->GetXaxis()->SetTitle("Position (µm)");
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h77->GetXaxis()->SetTitle("Position (um)");
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h77->GetYaxis()->SetTitle("Fraction of events");
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h77->SetTitle("Beam X position on cell");
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h77->SetFillColor(4);
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h77->SetLineColor(4);
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gaus->SetLineColor(6);
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//gaus->SetLineColor(6);
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h77->Fit("gaus");
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c1.cd(8);
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c1->cd(8);
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ntuple1->Project("hy","y");
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scale = 1/h88->Integral();
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h88->Scale(scale);
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@@ -396,12 +396,12 @@ c1.cd(8);
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h88->GetYaxis()->SetTitleSize(0.035);
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h88->GetXaxis()->SetTitleOffset(1.4);
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h88->GetYaxis()->SetTitleOffset(1.4);
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h88->GetXaxis()->SetTitle("Position (µm)");
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h88->GetXaxis()->SetTitle("Position (um)");
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h88->GetYaxis()->SetTitle("Fraction of events");
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h88->SetTitle("Beam Y position on cell");
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h88->SetFillColor(4);
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h88->SetLineColor(4);
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gaus->SetLineColor(6);
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//gaus->SetLineColor(6);
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h88->Fit("gaus");
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}
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