Import Geant4 10.7.0.beta source tree

2020-06-26 10:23:25 +02:00
parent c02c370437
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+//
+// ********************************************************************
+// * License and Disclaimer                                           *
+// *                                                                  *
+// * The  Geant4 software  is  copyright of the Copyright Holders  of *
+// * the Geant4 Collaboration.  It is provided  under  the terms  and *
+// * conditions of the Geant4 Software License,  included in the file *
+// * LICENSE and available at  http://cern.ch/geant4/license .  These *
+// * include a list of copyright holders.                             *
+// *                                                                  *
+// * Neither the authors of this software system, nor their employing *
+// * institutes,nor the agencies providing financial support for this *
+// * work  make  any representation or  warranty, express or implied, *
+// * regarding  this  software system or assume any liability for its *
+// * use.  Please see the license in the file  LICENSE  and URL above *
+// * for the full disclaimer and the limitation of liability.         *
+// *                                                                  *
+// * This  code  implementation is the result of  the  scientific and *
+// * technical work of the GEANT4 collaboration.                      *
+// * By using,  copying,  modifying or  distributing the software (or *
+// * any work based  on the software)  you  agree  to acknowledge its *
+// * use  in  resulting  scientific  publications,  and indicate your *
+// * acceptance of all terms of the Geant4 Software license.          *
+// ********************************************************************
+//
+/*
+ * G4DNAIRT.hh
+ *
+ *  Created on: Jul 23, 2019
+ *      Author: W. G. Shin
+ *              J. Ramos-Mendez and B. Faddegon
+*/
+
+#ifndef G4DNAIRT_HH_
+#define G4DNAIRT_HH_
+
+
+#include "globals.hh"
+#include "G4ThreeVector.hh"
+
+#include "G4DNAMolecularReaction.hh"
+#include "G4DNAMolecularReactionTable.hh"
+#include "G4MoleculeTable.hh"
+
+#include "G4VDNAReactionModel.hh"
+#include "G4VITReactionProcess.hh"
+
+#include "G4ITReactionTable.hh"
+#include "G4ITTrackHolder.hh"
+#include "G4ITReaction.hh"
+
+#include "G4Molecule.hh"
+#include "G4VITReactionProcess.hh"
+#include "G4ParticleChange.hh"
+
+#include "AddClone_def.hh"
+#include <vector>
+#include <map>
+
+class G4DNAMolecularReactionTable;
+class G4VDNAReactionModel;
+class G4ErrorFunction;
+
+class G4DNAIRT : public G4VITReactionProcess
+{
+public:
+
+    G4DNAIRT();
+    explicit G4DNAIRT(G4VDNAReactionModel*);
+    ~G4DNAIRT() override;
+    G4DNAIRT(const G4DNAIRT& other) = delete;
+    G4DNAIRT& operator=(const G4DNAIRT& other) = delete;
+
+    G4bool TestReactibility(const G4Track&,
+                            const G4Track&,
+                            double ,
+                            bool ) override;
+    std::vector<std::unique_ptr<G4ITReactionChange>> FindReaction(G4ITReactionSet*, const double, const double, const bool) override;
+    std::unique_ptr<G4ITReactionChange> MakeReaction(const G4Track&, const G4Track&) override;
+
+    void SetReactionModel(G4VDNAReactionModel*);
+
+    void Initialize() override;
+    void SpaceBinning();
+    void IRTSampling();
+    void Sampling(G4Track*);
+
+    G4double GetIndependentReactionTime(const G4MolecularConfiguration*, const G4MolecularConfiguration*, G4double);
+    G4int FindBin(G4int, G4double, G4double, G4double);
+    G4double SamplePDC(G4double , G4double );
+
+protected:
+    const G4DNAMolecularReactionTable*& fMolReactionTable;
+    G4VDNAReactionModel* fpReactionModel;
+
+private:
+    G4ITTrackHolder* fTrackHolder;
+    G4ITReactionSet* fReactionSet;
+    G4ErrorFunction* erfc;
+
+    std::map<G4int,std::map<G4int,std::map<G4int,std::vector<G4Track*>>>> spaceBinned;
+
+    G4double fRCutOff;
+    G4double timeMin;
+    G4double timeMax;
+
+    G4double fXMin, fYMin, fZMin;
+    G4double fXMax, fYMax, fZMax;
+    G4int fNx, fNy, fNz;
+    G4int xiniIndex, yiniIndex, ziniIndex;
+    G4int xendIndex, yendIndex, zendIndex;
+
+};
+
+#endif /* G4DNAIRT_HH_ */