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This commit is contained in:
Gabriele Cosmo
2021-06-25 16:12:29 +02:00
parent c968e26a39
commit 6399a014b6
4200 changed files with 207479 additions and 237366 deletions
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examples/advanced/microbeam/src/CellParameterisation.cc
+12 -30
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@@ -36,12 +36,9 @@
#include "G4LogicalVolume.hh"
#include "G4SystemOfUnits.hh"
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
// SINGLETON
CellParameterisation * CellParameterisation::gInstance = 0;
CellParameterisation::CellParameterisation
(G4Material * nucleus1, G4Material * cytoplasm1,
G4Material * nucleus2, G4Material * cytoplasm2,
@@ -59,21 +56,16 @@ CellParameterisation::CellParameterisation
G4int shiftX, shiftY, shiftZ;
G4double x,y,z,mat,den,tmp,density;
G4double denCyto1, denCyto2, denCyto3, denNucl1, denNucl2, denNucl3;
ncols = nlines = shiftX = shiftY = shiftZ = 0;
x = y = z = mat = den = tmp = density =
denCyto1 = denCyto2 = denCyto3 = denNucl1 = denNucl2 = denNucl3 = 0.0;
density=0;
denCyto1=0;
denCyto2=0;
denCyto3=0;
denNucl1=0;
denNucl2=0;
denNucl3=0;
ncols=0; nlines=0;
// READ PHANTOM
// READ PHANTOM
fNucleusMass = 0;
fCytoplasmMass = 0;
fDimCellBoxX = fDimCellBoxY = fDimCellBoxZ = micrometer;
FILE *fMap;
fMap = fopen("phantom.dat","r");
@@ -91,14 +83,14 @@ CellParameterisation::CellParameterisation
if (nlines == 1)
{
ncols = fscanf(fMap,"%lf %lf %lf",&fDimCellBoxX,&fDimCellBoxY,&fDimCellBoxZ);
ncols = fscanf(fMap,"%lf %lf %lf",&fDimCellBoxX,&fDimCellBoxY,&fDimCellBoxZ);
fDimCellBoxX=fDimCellBoxX*micrometer;
fDimCellBoxY=fDimCellBoxY*micrometer;
fDimCellBoxZ=fDimCellBoxZ*micrometer;
}
if (nlines == 2) ncols = fscanf(fMap,"%i %i %i",&shiftX,&shiftY,&shiftZ); // VOXEL SHIFT IN Z ASSUMED TO BE NEGATIVE
// VOXEL SHIFT IN Z ASSUMED TO BE NEGATIVE
if (nlines == 2) ncols = fscanf(fMap,"%i %i %i",&shiftX,&shiftY,&shiftZ);
if (nlines == 3) ncols = fscanf(fMap,"%lf %lf %lf",&denCyto1, &denCyto2, &denCyto3);
@@ -108,8 +100,8 @@ CellParameterisation::CellParameterisation
if (ncols < 0) break;
G4ThreeVector v(x+shiftX,y+shiftY,z-1500/(fDimCellBoxZ/micrometer)-shiftZ); // VOXEL SHIFT IN ORDER TO CENTER PHANTOM
// VOXEL SHIFT IN ORDER TO CENTER PHANTOM
G4ThreeVector v(x+shiftX,y+shiftY,z-1500/(fDimCellBoxZ/micrometer)-shiftZ);
if (nlines>4)
{
@@ -204,13 +196,9 @@ CellParameterisation::CellParameterisation
fCytoplasmAttributes3->SetForceSolid(false);
//
gInstance = this;
}
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
CellParameterisation::~CellParameterisation()
{
delete[] fMapCell;
@@ -219,8 +207,6 @@ CellParameterisation::~CellParameterisation()
delete[] fTissueType;
}
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
void CellParameterisation::ComputeTransformation
(const G4int copyNo, G4VPhysicalVolume* physVol) const
{
@@ -234,14 +220,10 @@ void CellParameterisation::ComputeTransformation
physVol->SetTranslation(origin);
}
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
void CellParameterisation::ComputeDimensions
(G4Box&, const G4int, const G4VPhysicalVolume*) const
{}
//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
G4Material*
CellParameterisation::ComputeMaterial(const G4int copyNo,
G4VPhysicalVolume* physVol,