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This commit is contained in:
Gabriele Cosmo
2021-06-25 16:12:29 +02:00
parent c968e26a39
commit 6399a014b6
4200 changed files with 207479 additions and 237366 deletions
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examples/advanced/doiPET/CMakeLists.txt
+1 -4
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@@ -1,10 +1,7 @@
#----------------------------------------------------------------------------
# Setup the project
#
cmake_minimum_required(VERSION 3.8...3.18)
if(${CMAKE_VERSION} VERSION_LESS 3.12)
cmake_policy(VERSION ${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION})
endif()
cmake_minimum_required(VERSION 3.12...3.20)
project(doiPET)
#----------------------------------------------------------------------------
examples/advanced/doiPET/History
+8
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@@ -5,6 +5,14 @@
Category History file
---------------------
24.05.2021 - B. Morgan (doiPET-V10-07-00)
Bump required CMake version range to 3.12...3.20, matching core Geant4
29.12.2020 - J.Allison; doiPET-V10-07-00
Replace deprecated G4VisAttributes::Invisible by
G4VisAttributes::GetInvisible().
02.11.2020 - B.Morgan; doiPET-V10-06-00
Support same CMake version range as core Geant4
examples/advanced/doiPET/src/doiPETDetectorConstruction.cc
+12 -12
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@@ -174,7 +174,7 @@ G4VPhysicalVolume* doiPETDetectorConstruction::Construct()
// Define the physical world volume
world_physicalV = new G4PVPlacement(0,G4ThreeVector(),world_logicalV, "world_physicalV", 0, false, 0, fCheckOverlaps);
world_logicalV->SetVisAttributes (G4VisAttributes::Invisible);
world_logicalV->SetVisAttributes (G4VisAttributes::GetInvisible());
//NOTE!!!
//The scanner specification (like size and number of crystals in each detctor) are given in the "doiPETGlobalParameters.hh" header file.
@@ -290,7 +290,7 @@ G4VPhysicalVolume* doiPETDetectorConstruction::Construct()
blockDetectorVisAtt->SetVisibility (true);
//blockDetectorVisAtt->SetForceWireframe (true);
blockDetector_logicalV->SetVisAttributes (blockDetectorVisAtt);
//blockDetector_logicalV->SetVisAttributes (G4VisAttributes::Invisible);
//blockDetector_logicalV->SetVisAttributes (G4VisAttributes::GetInvisible());
//visualization for the the box filled with air
G4VisAttributes* airBoxVisAtt;
@@ -298,7 +298,7 @@ G4VPhysicalVolume* doiPETDetectorConstruction::Construct()
airBoxVisAtt->SetVisibility (true);
airBoxVisAtt->SetForceWireframe (true);
airBox_logicalV->SetVisAttributes (airBoxVisAtt);
airBox_logicalV->SetVisAttributes (G4VisAttributes::Invisible);
airBox_logicalV->SetVisAttributes (G4VisAttributes::GetInvisible());
//visualization for the crystal
G4VisAttributes* crystalVisAtt;
@@ -306,7 +306,7 @@ G4VPhysicalVolume* doiPETDetectorConstruction::Construct()
//crystalVisAtt->SetVisibility (true);
crystalVisAtt->SetForceWireframe (true);
crystal_logicalV->SetVisAttributes (crystalVisAtt);
crystal_logicalV->SetVisAttributes (G4VisAttributes::Invisible);
crystal_logicalV->SetVisAttributes (G4VisAttributes::GetInvisible());
//always return the physical World
@@ -450,7 +450,7 @@ void doiPETDetectorConstruction::ConstructPhantom(G4LogicalVolume* worldLogical)
//Define the physical volume for the lung phantom and place it in the phantom_lungPMMA.
lung_physicalV = new G4PVPlacement(0, G4ThreeVector(0,0,0), lung_logicalV, "coldRegion_physicalV", lung_logicalV_PMMA, false, 0, fCheckOverlaps);
//lung_logicalV->SetVisAttributes (G4VisAttributes::Invisible);
//lung_logicalV->SetVisAttributes (G4VisAttributes::GetInvisible());
////////////////////////////////// Test phantom ////////////////////////////////////////////////////////
@@ -468,7 +468,7 @@ void doiPETDetectorConstruction::ConstructPhantom(G4LogicalVolume* worldLogical)
//Define the physical volume of the test phantom. The test phantom is placed next to the body phantom.
test_physicalV = new G4PVPlacement(0,G4ThreeVector(0,0,hieghtOfTestPhantom/2+zOffsetBodyPhantom + zOffset_testPhantom), test_logicalV, "phantom_physicalV", worldLogical, false, 0,fCheckOverlaps);
//test_logicalV->SetVisAttributes (G4VisAttributes::Invisible);
//test_logicalV->SetVisAttributes (G4VisAttributes::GetInvisible());
////////////////////////////////// Six Spherical phantoms for hot and cold lesions (sources) placed inside the body phatom ///////////////////////////////////
@@ -521,8 +521,8 @@ void doiPETDetectorConstruction::ConstructPhantom(G4LogicalVolume* worldLogical)
//Define the physical volume of the water phatom for the hot sphere
hotSphereWater_physicalV = new G4PVPlacement(0, G4ThreeVector(0,0,0), hotSphereWater_logicalV, "phantom_physicalV", hotSpherePMMA_logicalV, false, i,fCheckOverlaps);
//G4cout<<"Hot sphere "<<i<<" is placed. "<< " sphereDiameter = " <<sphereDiameter <<" "<< "Position " <<spherePositionX<<" "<< spherePositionY<<", "<<sphereDiameter<<G4endl;
//hotSpherePMMA_logicalV->SetVisAttributes (G4VisAttributes::Invisible);
//hotSphereWater_logicalV->SetVisAttributes (G4VisAttributes::Invisible);
//hotSpherePMMA_logicalV->SetVisAttributes (G4VisAttributes::GetInvisible());
//hotSphereWater_logicalV->SetVisAttributes (G4VisAttributes::GetInvisible());
}
//Cold sphere phantoms
@@ -548,8 +548,8 @@ void doiPETDetectorConstruction::ConstructPhantom(G4LogicalVolume* worldLogical)
//Define the physical volume of the water phatom for the cold sphere
coldSphereWater_physicalV = new G4PVPlacement(0, G4ThreeVector(0,0,0), coldSphereWater_logicalV, "coldRegion_physicalV", coldSpherePMMA_logicalV, false, i,fCheckOverlaps);
//G4cout<<"Cold sphere "<<i<<" is placed. "<< " sphereDiameter = " <<sphereDiameter <<" "<< "Position " <<spherePositionX<<" "<< spherePositionY<<" "<<sphereDiameter<<G4endl;
//coldSpherePMMA_logicalV->SetVisAttributes (G4VisAttributes::Invisible);
//coldSphereWater_logicalV->SetVisAttributes (G4VisAttributes::Invisible);
//coldSpherePMMA_logicalV->SetVisAttributes (G4VisAttributes::GetInvisible());
//coldSphereWater_logicalV->SetVisAttributes (G4VisAttributes::GetInvisible());
}
}
}
@@ -631,7 +631,7 @@ void doiPETDetectorConstruction::ConstructPhantom(G4LogicalVolume* worldLogical)
//place the phantom at one end of the PMMA phantom
WaterPhantom_physicalV = new G4PVPlacement(0,G4ThreeVector(0,0,rodPhantomLength/2), waterPhantom_logicalV, "phantom_physicalV", phantom_logicalV, false, 0,fCheckOverlaps);
//waterPhantom_logicalV->SetVisAttributes (G4VisAttributes::Invisible);
//waterPhantom_logicalV->SetVisAttributes (G4VisAttributes::GetInvisible());
//define the surrounding PMMA chamber
G4Tubs* chamberPMMA = new G4Tubs("chamber_phantom1", 0*mm,chamberDiameter/2,chamberPhantomLength/2,0*deg,360*deg);
@@ -765,7 +765,7 @@ void doiPETDetectorConstruction::ConstructPhantom(G4LogicalVolume* worldLogical)
phantomVisAtt->SetVisibility (true);
phantomVisAtt->SetForceWireframe (true);
phantom_logicalV->SetVisAttributes (phantomVisAtt);
//phantom_logicalV->SetVisAttributes (G4VisAttributes::Invisible);
//phantom_logicalV->SetVisAttributes (G4VisAttributes::GetInvisible());
}
//Change the type of the phantom via .mac file