Import Geant4 11.3.0 source tree

2024-12-06 11:11:40 +01:00
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+//
+// ********************************************************************
+// * License and Disclaimer                                           *
+// *                                                                  *
+// * The  Geant4 software  is  copyright of the Copyright Holders  of *
+// * the Geant4 Collaboration.  It is provided  under  the terms  and *
+// * conditions of the Geant4 Software License,  included in the file *
+// * LICENSE and available at  http://cern.ch/geant4/license .  These *
+// * include a list of copyright holders.                             *
+// *                                                                  *
+// * Neither the authors of this software system, nor their employing *
+// * institutes,nor the agencies providing financial support for this *
+// * work  make  any representation or  warranty, express or implied, *
+// * regarding  this  software system or assume any liability for its *
+// * use.  Please see the license in the file  LICENSE  and URL above *
+// * for the full disclaimer and the limitation of liability.         *
+// *                                                                  *
+// * This  code  implementation is the result of  the  scientific and *
+// * technical work of the GEANT4 collaboration.                      *
+// * By using,  copying,  modifying or  distributing the software (or *
+// * any work based  on the software)  you  agree  to acknowledge its *
+// * use  in  resulting  scientific  publications,  and indicate your *
+// * acceptance of all terms of the Geant4 Software license.          *
+// ********************************************************************
+//
+//
+/// file: DamageModel.hh
+/// brief: Parameters related to the DNA Damage model
+#ifndef MOLECULAR_DAMAGE_MODEL
+#define MOLECULAR_DAMAGE_MODEL
+
+#include "DamageModelMessenger.hh"
+
+#include "G4Electron_aq.hh"
+#include "G4Hydrogen.hh"
+#include "G4MolecularConfiguration.hh"
+#include "G4OH.hh"
+#include "G4SystemOfUnits.hh"
+#include "Randomize.hh"
+#include "globals.hh"
+
+//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
+
+class DamageModel
+{
+  public:
+    DamageModel();
+
+    virtual ~DamageModel() { delete fpDamageMessenger; };
+
+    // methods
+    G4bool IsDirectStrandBreak(const G4double&) const;
+
+    G4bool IsIndirectStrandDamage(const G4MolecularConfiguration*) const;
+
+    G4bool IsIndirectBaseDamage(const G4MolecularConfiguration*) const;
+
+    G4bool IsInducedStrandBreak(const G4MolecularConfiguration*) const;
+
+    // setters
+    void SetDirectDamageLower(G4double d)
+    {
+      fDirectDmgLower = d;
+      if (fDirectDmgLower < fDirectDmgUpper) fDirectDmgUpper = fDirectDmgLower;
+    };
+
+    void SetDirectDamageUpper(G4double d)
+    {
+      fDirectDmgUpper = d;
+      if (fDirectDmgLower > fDirectDmgUpper) fDirectDmgLower = fDirectDmgUpper;
+    };
+
+    // Indirect OH
+    void SetIndirectOHStrandChance(G4double d)
+    {
+      CheckValidProbability("DamageStrandOH", d);
+      fStrandOH = d;
+    }
+
+    void SetIndirectOHBaseChance(G4double d)
+    {
+      CheckValidProbability("DamageBaseOH", d);
+      fBaseOH = d;
+    }
+
+    void SetInductionOHChance(G4double d)
+    {
+      CheckValidProbability("InductionOH", d);
+      fInductionOH = d;
+    };
+
+    // Indirect Eaq
+    void SetIndirectEaqStrandChance(G4double d)
+    {
+      CheckValidProbability("DamageStrandEaq", d);
+      fStrandEaq = d;
+    }
+
+    void SetIndirectEaqBaseChance(G4double d)
+    {
+      CheckValidProbability("DamageBaseEaq", d);
+      fBaseEaq = d;
+    }
+
+    void SetInductionEaqChance(G4double d)
+    {
+      CheckValidProbability("InductionEaq", d);
+      fInductionEaq = d;
+    };
+
+    // Indirect H
+    void SetIndirectHStrandChance(G4double d)
+    {
+      CheckValidProbability("DamageStrandH", d);
+      fStrandH = d;
+    }
+
+    void SetIndirectHBaseChance(G4double d)
+    {
+      CheckValidProbability("DamageBaseH", d);
+      fBaseH = d;
+    }
+
+    void SetInductionHChance(G4double d)
+    {
+      CheckValidProbability("InductionH", d);
+      fInductionH = d;
+    };
+
+  protected:
+    static void CheckValidProbability(const G4String& str, G4double p);
+
+  private:
+    DamageModelMessenger* fpDamageMessenger;
+    G4double fDirectDmgLower = 17.5 * eV, fDirectDmgUpper = 17.5 * eV;
+    G4double fInductionOH = 0, fInductionEaq = 0, fInductionH = 0;
+    G4double fStrandOH = 1.0, fStrandEaq = 1.0, fStrandH = 1.0;
+    G4double fBaseOH = 1.0, fBaseEaq = 1.0, fBaseH = 1.0;
+    const G4MoleculeDefinition* fOH = G4OH::Definition();
+    const G4MoleculeDefinition* fe_aq = G4Electron_aq::Definition();
+    const G4MoleculeDefinition* fH = G4Hydrogen::Definition();
+};
+
+//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo......
+
+#endif  // MOLECULAR_DAMAGE_MODEL