231 lines
11 KiB
HTML
231 lines
11 KiB
HTML
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<a class="navbar-brand" href="DecisionTrees-bs.html">Data Analysis and Machine Learning: Trees, forests and all that</a>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs001.html#___sec0" style="font-size: 80%;">Decision trees, overarching aims</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs002.html#___sec1" style="font-size: 80%;">How do we set it up?</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs003.html#___sec2" style="font-size: 80%;">Decision trees and Regression</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs004.html#___sec3" style="font-size: 80%;">Maxwell-Boltzmann velocity distribution</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs005.html#___sec4" style="font-size: 80%;">Building a tree, regression</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs006.html#___sec5" style="font-size: 80%;">A top-down approach, recursive binary splitting</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs007.html#___sec6" style="font-size: 80%;">Making a tree</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs008.html#___sec7" style="font-size: 80%;">Pruning the tree</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs009.html#___sec8" style="font-size: 80%;">Cost complexity pruning</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs010.html#___sec9" style="font-size: 80%;">A schematic procedure</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs011.html#___sec10" style="font-size: 80%;">A classification tree</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs012.html#___sec11" style="font-size: 80%;">Growing a classification tree</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs013.html#___sec12" style="font-size: 80%;">Classification tree, how to split nodes</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs014.html#___sec13" style="font-size: 80%;">Entropy and the ID3 algorithm</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs015.html#___sec14" style="font-size: 80%;">Writing your own code for a classification tree</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs016.html#___sec15" style="font-size: 80%;">Back to moons again</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs017.html#___sec16" style="font-size: 80%;">Playing around with regions</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs018.html#___sec17" style="font-size: 80%;">Regression trees</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs019.html#___sec18" style="font-size: 80%;">Final regressor code</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs020.html#___sec19" style="font-size: 80%;">Classification again: The zoo data</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs021.html#___sec20" style="font-size: 80%;">Pros and cons of trees, pros</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs022.html#___sec21" style="font-size: 80%;">Disadvantages</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs023.html#___sec22" style="font-size: 80%;">Bagging</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs024.html#___sec23" style="font-size: 80%;">Simple example, head or tail</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs025.html#___sec24" style="font-size: 80%;">Random forests</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs026.html#___sec25" style="font-size: 80%;">A simple scikit-learn example</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs027.html#___sec26" style="font-size: 80%;">Please, not the moons again!</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs028.html#___sec27" style="font-size: 80%;">Bagging examples</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs029.html#___sec28" style="font-size: 80%;">Then random forests</a></li>
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<!-- navigation toc: --> <li><a href="._DecisionTrees-bs030.html#___sec29" style="font-size: 80%;">Boosting and more</a></li>
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<a name="part0000"></a>
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<!-- ------------------- main content ---------------------- -->
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<div class="jumbotron">
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<center><h1>Data Analysis and Machine Learning: Trees, forests and all that</h1></center> <!-- document title -->
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<p>
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<!-- author(s): Morten Hjorth-Jensen -->
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<center>
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<b>Morten Hjorth-Jensen</b> [1, 2]
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<!-- institution(s) -->
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<center>[1] <b>Department of Physics, University of Oslo</b></center>
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<center>[2] <b>Department of Physics and Astronomy and National Superconducting Cyclotron Laboratory, Michigan State University</b></center>
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<br>
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<p>
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<center><h4>Dec 17, 2018</h4></center> <!-- date -->
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<br>
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<p><a href="._DecisionTrees-bs001.html" class="btn btn-primary btn-lg">Read »</a></p>
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<li class="active"><a href="._DecisionTrees-bs000.html">1</a></li>
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<li><a href="._DecisionTrees-bs001.html">2</a></li>
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<li><a href="._DecisionTrees-bs002.html">3</a></li>
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<li><a href="._DecisionTrees-bs003.html">4</a></li>
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<li><a href="._DecisionTrees-bs004.html">5</a></li>
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<li><a href="._DecisionTrees-bs005.html">6</a></li>
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<li><a href="._DecisionTrees-bs006.html">7</a></li>
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<li><a href="._DecisionTrees-bs007.html">8</a></li>
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<li><a href="._DecisionTrees-bs008.html">9</a></li>
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<li><a href="">...</a></li>
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<li><a href="._DecisionTrees-bs030.html">31</a></li>
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<li><a href="._DecisionTrees-bs001.html">»</a></li>
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<!-- copyright --> © 1999-2018, Morten Hjorth-Jensen. Released under CC Attribution-NonCommercial 4.0 license
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