diff --git a/doc/pub/summary/html/._summary-bs000.html b/doc/pub/summary/html/._summary-bs000.html new file mode 100644 index 000000000..588acffcb --- /dev/null +++ b/doc/pub/summary/html/._summary-bs000.html @@ -0,0 +1,181 @@ + + + + + + + +Summary of course + + + + + + + + + + + + + + + + +
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Summary of course

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+Morten Hjorth-Jensen Email morten.hjorth-jensen@fys.uio.no [1, 2] +
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[1] Department of Physics and Center of Mathematics for Applications, University of Oslo
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[2] National Superconducting Cyclotron Laboratory, Michigan State University
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Nov 28, 2018

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Read »

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+ © 1999-2018, Morten Hjorth-Jensen Email morten.hjorth-jensen@fys.uio.no. Released under CC Attribution-NonCommercial 4.0 license +
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What? Me worry? No final exam in this course!

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What did I learn in school this year

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+Our ideal about knowledge on computational science + +

+Does that match the experiences you have made this semester? +



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Topics we have covered this year

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Linear algebra and eigenvalue problems, chapters 6.1-6.5 and 7.1-7.5

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Learning outcomes and overarching aims of this course

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Additional learning outcomes

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Other courses on Data science and Machine Learning at UiO

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Best wishes to you all and thanks so much for your heroic efforts this semester

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+ + + + + + diff --git a/doc/src/Summary/clean.sh b/doc/src/Summary/clean.sh new file mode 100755 index 000000000..2e5da2c72 --- /dev/null +++ b/doc/src/Summary/clean.sh @@ -0,0 +1,3 @@ +#!/bin/sh +doconce clean +rm -rf *.pdf *.tex ipynb*.tar.gz *.html ._*.html *~ reveal.js Trash README.txt diff --git a/doc/src/Summary/figures/Nebbdyr2.pdf b/doc/src/Summary/figures/Nebbdyr2.pdf new file mode 100755 index 000000000..b830726fb Binary files /dev/null and b/doc/src/Summary/figures/Nebbdyr2.pdf differ diff --git a/doc/src/Summary/figures/Nebbdyr2.png b/doc/src/Summary/figures/Nebbdyr2.png new file mode 100644 index 000000000..a21b0cb99 Binary files /dev/null and b/doc/src/Summary/figures/Nebbdyr2.png differ diff --git a/doc/src/Summary/figures/exam1.jpeg b/doc/src/Summary/figures/exam1.jpeg new file mode 100644 index 000000000..ba4c2edba Binary files /dev/null and b/doc/src/Summary/figures/exam1.jpeg differ diff --git a/doc/src/Summary/figures/exam2.jpg b/doc/src/Summary/figures/exam2.jpg new file mode 100644 index 000000000..e48127f98 Binary files /dev/null and b/doc/src/Summary/figures/exam2.jpg differ diff --git a/doc/src/Summary/figures/whatmeworry.jpeg b/doc/src/Summary/figures/whatmeworry.jpeg new file mode 100644 index 000000000..429988ffa Binary files /dev/null and b/doc/src/Summary/figures/whatmeworry.jpeg differ diff --git a/doc/src/Summary/make.sh b/doc/src/Summary/make.sh new file mode 100755 index 000000000..d908b90b9 --- /dev/null +++ b/doc/src/Summary/make.sh @@ -0,0 +1,95 @@ +#!/bin/sh +set -x + +function system { + "$@" + if [ $? -ne 0 ]; then + echo "make.sh: unsuccessful command $@" + echo "abort!" + exit 1 + fi +} + +if [ $# -eq 0 ]; then +echo 'bash make.sh slides1|slides2' +exit 1 +fi + +name=$1 +rm -f *.tar.gz + +opt="--encoding=utf-8" +# Note: Makefile examples contain constructions like ${PROG} which +# looks like Mako constructions, but they are not. Use --no_mako +# to turn off Mako processing. +opt="--no_mako" + +rm -f *.aux + + +html=${name}-reveal +system doconce format html $name --pygments_html_style=perldoc --keep_pygments_html_bg --html_links_in_new_window --html_output=$html $opt +system doconce slides_html $html reveal --html_slide_theme=beige + +# Plain HTML documents + +html=${name}-solarized +system doconce format html $name --pygments_html_style=perldoc --html_style=solarized3 --html_links_in_new_window --html_output=$html $opt +system doconce split_html $html.html --method=space10 + +html=${name} +system doconce format html $name --pygments_html_style=default --html_style=bloodish --html_links_in_new_window --html_output=$html $opt +system doconce split_html $html.html --method=space10 + +# Bootstrap style +html=${name}-bs +system doconce format html $name --html_style=bootstrap --pygments_html_style=default --html_admon=bootstrap_panel --html_output=$html $opt +system doconce split_html $html.html --method=split --pagination --nav_button=bottom + +# IPython notebook +system doconce format ipynb $name $opt + + +# Ordinary plain LaTeX document +rm -f *.aux # important after beamer +system doconce format pdflatex $name --minted_latex_style=trac --latex_admon=paragraph $opt +system doconce ptex2tex $name envir=minted +# Add special packages +doconce subst "% Add user's preamble" "\g<1>\n\\usepackage{simplewick}" $name.tex +doconce replace 'section{' 'section*{' $name.tex +pdflatex -shell-escape $name +pdflatex -shell-escape $name +mv -f $name.pdf ${name}-minted.pdf +cp $name.tex ${name}-plain-minted.tex + + + +# Publish +dest=../../pub +if [ ! -d $dest/$name ]; then +mkdir $dest/$name +mkdir $dest/$name/pdf +mkdir $dest/$name/html +mkdir $dest/$name/ipynb +fi +cp ${name}*.pdf $dest/$name/pdf +cp -r ${name}*.html ._${name}*.html reveal.js $dest/$name/html + +# Figures: cannot just copy link, need to physically copy the files +if [ -d fig-${name} ]; then +if [ ! -d $dest/$name/html/fig-$name ]; then +mkdir $dest/$name/html/fig-$name +fi +cp -r fig-${name}/* $dest/$name/html/fig-$name +fi + +cp ${name}.ipynb $dest/$name/ipynb +ipynb_tarfile=ipynb-${name}-src.tar.gz +if [ ! -f ${ipynb_tarfile} ]; then +cat > README.txt < diff --git a/doc/web/course.html b/doc/web/course.html index 1e8b55590..675973cce 100644 --- a/doc/web/course.html +++ b/doc/web/course.html @@ -105,30 +105,31 @@ div { text-align: justify; text-justify: inter-word; } None, '___sec16'), ('Elements of Bayesian theory', 2, None, '___sec17'), - ('Python and Scikit Learn, a short guide', 2, None, '___sec18'), - ('Teach yourself C++', 2, None, '___sec19'), - ('Projects and Exercises Fall 2018', 2, None, '___sec20'), - ('First homework set, week 35', 3, None, '___sec21'), - ('Second homework set, week 36', 3, None, '___sec22'), - ('Project 1, Deadline October 1', 3, None, '___sec23'), - ('Project 2, Deadline November 5', 3, None, '___sec24'), - ('Project 3, Deadline December 14', 3, None, '___sec25'), - ('Course content', 3, None, '___sec26'), - ('Learning outcomes', 2, None, '___sec27'), - ('Prerequisites', 2, None, '___sec28'), - ('The course has two central parts', 2, None, '___sec29'), + ('Summary', 2, None, '___sec18'), + ('Python and Scikit Learn, a short guide', 2, None, '___sec19'), + ('Teach yourself C++', 2, None, '___sec20'), + ('Projects and Exercises Fall 2018', 2, None, '___sec21'), + ('First homework set, week 35', 3, None, '___sec22'), + ('Second homework set, week 36', 3, None, '___sec23'), + ('Project 1, Deadline October 1', 3, None, '___sec24'), + ('Project 2, Deadline November 5', 3, None, '___sec25'), + ('Project 3, Deadline December 14', 3, None, '___sec26'), + ('Course content', 3, None, '___sec27'), + ('Learning outcomes', 2, None, '___sec28'), + ('Prerequisites', 2, None, '___sec29'), + ('The course has two central parts', 2, None, '___sec30'), ('Statistical analysis and optimization of data', 3, None, - '___sec30'), - ('Machine learning', 3, None, '___sec31'), - ('Recommended textbooks', 2, None, '___sec32'), + '___sec31'), + ('Machine learning', 3, None, '___sec32'), + ('Recommended textbooks', 2, None, '___sec33'), ('"Other ' 'textbooks":"https://github.com/CompPhysics/MachineLearning/tree/master/doc/Textbooks"', 2, None, - '___sec33'), - ('Teaching schedule Fall 2018', 2, None, '___sec34')]} + '___sec34'), + ('Teaching schedule Fall 2018', 2, None, '___sec35')]} end of tocinfo --> @@ -713,9 +714,38 @@ formulas in HTML or ipython notebook files. +

Summary

+ + + -

Python and Scikit Learn, a short guide

+

Python and Scikit Learn, a short guide

-

Machine learning

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Machine learning

The following topics will be covered @@ -919,14 +949,14 @@ The following topics will be covered All the above topics will be supported by examples, hands-on exercises and project work. -

Recommended textbooks

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Recommended textbooks

-

Other textbooks

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Other textbooks

General learning book on statistical analysis: @@ -948,7 +978,7 @@ All the above topics will be supported by examples, hands-on exercises and proje -

Teaching schedule Fall 2018

+

Teaching schedule Fall 2018

Acronyms for textbooks and references to chapter