updating week 46

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mhjensen
2020-11-09 23:21:39 +01:00
parent 30d8508b04
commit 40023e523f
36 changed files with 2809 additions and 2659 deletions
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@@ -42,39 +42,41 @@ Automatically generated HTML file from DocOnce source
<!-- tocinfo
{'highest level': 2,
'sections': [('Overview of week 46', 2, None, '___sec0'),
('Support Vector Machines, overarching aims', 2, None, '___sec1'),
('Hyperplanes and all that', 2, None, '___sec2'),
('What is a hyperplane?', 2, None, '___sec3'),
('A $p$-dimensional space of features', 2, None, '___sec4'),
('The two-dimensional case', 2, None, '___sec5'),
('Getting into the details', 2, None, '___sec6'),
('First attempt at a minimization approach', 2, None, '___sec7'),
('Solving the equations', 2, None, '___sec8'),
('Code Example', 2, None, '___sec9'),
('Problems with the Simpler Approach', 2, None, '___sec10'),
('A better approach', 2, None, '___sec11'),
('Thursday', 2, None, '___sec1'),
('Friday', 2, None, '___sec2'),
('Support Vector Machines, overarching aims', 2, None, '___sec3'),
('Hyperplanes and all that', 2, None, '___sec4'),
('What is a hyperplane?', 2, None, '___sec5'),
('A $p$-dimensional space of features', 2, None, '___sec6'),
('The two-dimensional case', 2, None, '___sec7'),
('Getting into the details', 2, None, '___sec8'),
('First attempt at a minimization approach', 2, None, '___sec9'),
('Solving the equations', 2, None, '___sec10'),
('Code Example', 2, None, '___sec11'),
('Problems with the Simpler Approach', 2, None, '___sec12'),
('A better approach', 2, None, '___sec13'),
('A quick Reminder on Lagrangian Multipliers',
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('Adding the Multiplier', 2, None, '___sec13'),
('Setting up the Problem', 2, None, '___sec14'),
('The problem to solve', 2, None, '___sec15'),
('The last steps', 2, None, '___sec16'),
('A soft classifier', 2, None, '___sec17'),
('Soft optmization problem', 2, None, '___sec18'),
('Kernels and non-linearity', 2, None, '___sec19'),
('The equations', 2, None, '___sec20'),
('The problem to solve', 2, None, '___sec21'),
("Different kernels and Mercer's theorem", 2, None, '___sec22'),
('The moons example', 2, None, '___sec23'),
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('The moons example', 2, None, '___sec25'),
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<body>
@@ -113,33 +115,35 @@ MathJax.Hub.Config({
<a href="#" class="dropdown-toggle" data-toggle="dropdown">Contents <b class="caret"></b></a>
<ul class="dropdown-menu">
<!-- navigation toc: --> <li><a href="._week46-bs001.html#___sec0" style="font-size: 80%;">Overview of week 46</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs002.html#___sec1" style="font-size: 80%;">Support Vector Machines, overarching aims</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs003.html#___sec2" style="font-size: 80%;">Hyperplanes and all that</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs004.html#___sec3" style="font-size: 80%;">What is a hyperplane?</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs005.html#___sec4" style="font-size: 80%;">A \( p \)-dimensional space of features</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs006.html#___sec5" style="font-size: 80%;">The two-dimensional case</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs007.html#___sec6" style="font-size: 80%;">Getting into the details</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs008.html#___sec7" style="font-size: 80%;">First attempt at a minimization approach</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs009.html#___sec8" style="font-size: 80%;">Solving the equations</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs010.html#___sec9" style="font-size: 80%;">Code Example</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs011.html#___sec10" style="font-size: 80%;">Problems with the Simpler Approach</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs012.html#___sec11" style="font-size: 80%;">A better approach</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs013.html#___sec12" style="font-size: 80%;">A quick Reminder on Lagrangian Multipliers</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs014.html#___sec13" style="font-size: 80%;">Adding the Multiplier</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs015.html#___sec14" style="font-size: 80%;">Setting up the Problem</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs016.html#___sec15" style="font-size: 80%;">The problem to solve</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs017.html#___sec16" style="font-size: 80%;">The last steps</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs018.html#___sec17" style="font-size: 80%;">A soft classifier</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs019.html#___sec18" style="font-size: 80%;">Soft optmization problem</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs020.html#___sec19" style="font-size: 80%;">Kernels and non-linearity</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs021.html#___sec20" style="font-size: 80%;">The equations</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs022.html#___sec21" style="font-size: 80%;">The problem to solve</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs023.html#___sec22" style="font-size: 80%;">Different kernels and Mercer's theorem</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs024.html#___sec23" style="font-size: 80%;">The moons example</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs025.html#___sec24" style="font-size: 80%;">Mathematical optimization of convex functions</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs026.html#___sec25" style="font-size: 80%;">How do we solve these problems?</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs027.html#___sec26" style="font-size: 80%;">A simple example</a></li>
<!-- navigation toc: --> <li><a href="#___sec27" style="font-size: 80%;">Back to the more realistic cases</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs002.html#___sec1" style="font-size: 80%;">Thursday</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs003.html#___sec2" style="font-size: 80%;">Friday</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs004.html#___sec3" style="font-size: 80%;">Support Vector Machines, overarching aims</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs005.html#___sec4" style="font-size: 80%;">Hyperplanes and all that</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs006.html#___sec5" style="font-size: 80%;">What is a hyperplane?</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs007.html#___sec6" style="font-size: 80%;">A \( p \)-dimensional space of features</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs008.html#___sec7" style="font-size: 80%;">The two-dimensional case</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs009.html#___sec8" style="font-size: 80%;">Getting into the details</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs010.html#___sec9" style="font-size: 80%;">First attempt at a minimization approach</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs011.html#___sec10" style="font-size: 80%;">Solving the equations</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs012.html#___sec11" style="font-size: 80%;">Code Example</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs013.html#___sec12" style="font-size: 80%;">Problems with the Simpler Approach</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs014.html#___sec13" style="font-size: 80%;">A better approach</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs015.html#___sec14" style="font-size: 80%;">A quick Reminder on Lagrangian Multipliers</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs016.html#___sec15" style="font-size: 80%;">Adding the Multiplier</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs017.html#___sec16" style="font-size: 80%;">Setting up the Problem</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs018.html#___sec17" style="font-size: 80%;">The problem to solve</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs019.html#___sec18" style="font-size: 80%;">The last steps</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs020.html#___sec19" style="font-size: 80%;">A soft classifier</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs021.html#___sec20" style="font-size: 80%;">Soft optmization problem</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs022.html#___sec21" style="font-size: 80%;">Kernels and non-linearity</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs023.html#___sec22" style="font-size: 80%;">The equations</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs024.html#___sec23" style="font-size: 80%;">The problem to solve</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs025.html#___sec24" style="font-size: 80%;">Different kernels and Mercer's theorem</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs026.html#___sec25" style="font-size: 80%;">The moons example</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs027.html#___sec26" style="font-size: 80%;">Mathematical optimization of convex functions</a></li>
<!-- navigation toc: --> <li><a href="#___sec27" style="font-size: 80%;">How do we solve these problems?</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs029.html#___sec28" style="font-size: 80%;">A simple example</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs030.html#___sec29" style="font-size: 80%;">Back to the more realistic cases</a></li>
</ul>
</li>
@@ -155,28 +159,30 @@ MathJax.Hub.Config({
<a name="part0028"></a>
<!-- !split -->
<h2 id="___sec27" class="anchor">Back to the more realistic cases </h2>
<h2 id="___sec27" class="anchor">How do we solve these problems? </h2>
<p>
We are now ready to return to our setup of the optmization problem for a more realistic case. Introducing the <b>slack</b> parameter \( C \) we have
$$
\frac{1}{2} \boldsymbol{\lambda}^T\begin{bmatrix} y_1y_1K(\boldsymbol{x}_1,\boldsymbol{x}_1) & y_1y_2K(\boldsymbol{x}_1,\boldsymbol{x}_2) & \dots & \dots & y_1y_nK(\boldsymbol{x}_1,\boldsymbol{x}_n) \\
y_2y_1K(\boldsymbol{x}_2,\boldsymbol{x}_1) & y_2y_2K(\boldsymbol{x}_2,\boldsymbol{x}_2) & \dots & \dots & y_1y_nK(\boldsymbol{x}_2,\boldsymbol{x}_n) \\
\dots & \dots & \dots & \dots & \dots \\
\dots & \dots & \dots & \dots & \dots \\
y_ny_1K(\boldsymbol{x}_n,\boldsymbol{x}_1) & y_ny_2K(\boldsymbol{x}_n\boldsymbol{x}_2) & \dots & \dots & y_ny_nK(\boldsymbol{x}_n,\boldsymbol{x}_n) \\
\end{bmatrix}\boldsymbol{\lambda}-\mathbb{I}\boldsymbol{\lambda},
$$
subject to \( \boldsymbol{y}^T\boldsymbol{\lambda}=0 \). Here we defined the vectors \( \boldsymbol{\lambda} =[\lambda_1,\lambda_2,\dots,\lambda_n] \) and
\( \boldsymbol{y}=[y_1,y_2,\dots,y_n] \).
With the slack constants this leads to the additional constraint \( 0\leq \lambda_i \leq C \).
If we use Python as programming language and wish to venture beyond
<b>scikit-learn</b>, <b>tensorflow</b> and similar software which makes our
lives so much easier, we need to dive into the wonderful world of
quadratic programming. We can, if we wish, solve the minimization
problem using say standard gradient methods or conjugate gradient
methods. However, these methods tend to exhibit a rather slow
converge. So, welcome to the promised land of quadratic programming.
<p>
<b>code will be added</b>
The functions we need are contained in the quadratic programming package <b>CVXOPT</b> and we need to import it together with <b>numpy</b> as
<p>
<!-- code=python (!bc pycod) typeset with pygments style "default" -->
<div class="highlight" style="background: #f8f8f8"><pre style="line-height: 125%"><span></span><span style="color: #008000; font-weight: bold">import</span> <span style="color: #0000FF; font-weight: bold">numpy</span>
<span style="color: #008000; font-weight: bold">import</span> <span style="color: #0000FF; font-weight: bold">cvxopt</span>
</pre></div>
<p>
This will make our life much easier. You don't need t write your own optimizer.
<p>
<p>
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@@ -192,6 +198,9 @@ With the slack constants this leads to the additional constraint \( 0\leq \lamb
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