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updating week 46

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mhjensen
2020-11-09 23:21:39 +01:00
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@@ -42,39 +42,41 @@ Automatically generated HTML file from DocOnce source
<!-- tocinfo
{'highest level': 2,
'sections': [('Overview of week 46', 2, None, '___sec0'),
('Support Vector Machines, overarching aims', 2, None, '___sec1'),
('Hyperplanes and all that', 2, None, '___sec2'),
('What is a hyperplane?', 2, None, '___sec3'),
('A $p$-dimensional space of features', 2, None, '___sec4'),
('The two-dimensional case', 2, None, '___sec5'),
('Getting into the details', 2, None, '___sec6'),
('First attempt at a minimization approach', 2, None, '___sec7'),
('Solving the equations', 2, None, '___sec8'),
('Code Example', 2, None, '___sec9'),
('Problems with the Simpler Approach', 2, None, '___sec10'),
('A better approach', 2, None, '___sec11'),
('Thursday', 2, None, '___sec1'),
('Friday', 2, None, '___sec2'),
('Support Vector Machines, overarching aims', 2, None, '___sec3'),
('Hyperplanes and all that', 2, None, '___sec4'),
('What is a hyperplane?', 2, None, '___sec5'),
('A $p$-dimensional space of features', 2, None, '___sec6'),
('The two-dimensional case', 2, None, '___sec7'),
('Getting into the details', 2, None, '___sec8'),
('First attempt at a minimization approach', 2, None, '___sec9'),
('Solving the equations', 2, None, '___sec10'),
('Code Example', 2, None, '___sec11'),
('Problems with the Simpler Approach', 2, None, '___sec12'),
('A better approach', 2, None, '___sec13'),
('A quick Reminder on Lagrangian Multipliers',
2,
None,
'___sec12'),
('Adding the Multiplier', 2, None, '___sec13'),
('Setting up the Problem', 2, None, '___sec14'),
('The problem to solve', 2, None, '___sec15'),
('The last steps', 2, None, '___sec16'),
('A soft classifier', 2, None, '___sec17'),
('Soft optmization problem', 2, None, '___sec18'),
('Kernels and non-linearity', 2, None, '___sec19'),
('The equations', 2, None, '___sec20'),
('The problem to solve', 2, None, '___sec21'),
("Different kernels and Mercer's theorem", 2, None, '___sec22'),
('The moons example', 2, None, '___sec23'),
'___sec14'),
('Adding the Multiplier', 2, None, '___sec15'),
('Setting up the Problem', 2, None, '___sec16'),
('The problem to solve', 2, None, '___sec17'),
('The last steps', 2, None, '___sec18'),
('A soft classifier', 2, None, '___sec19'),
('Soft optmization problem', 2, None, '___sec20'),
('Kernels and non-linearity', 2, None, '___sec21'),
('The equations', 2, None, '___sec22'),
('The problem to solve', 2, None, '___sec23'),
("Different kernels and Mercer's theorem", 2, None, '___sec24'),
('The moons example', 2, None, '___sec25'),
('Mathematical optimization of convex functions',
2,
None,
'___sec24'),
('How do we solve these problems?', 2, None, '___sec25'),
('A simple example', 2, None, '___sec26'),
('Back to the more realistic cases', 2, None, '___sec27')]}
'___sec26'),
('How do we solve these problems?', 2, None, '___sec27'),
('A simple example', 2, None, '___sec28'),
('Back to the more realistic cases', 2, None, '___sec29')]}
end of tocinfo -->
<body>
@@ -113,33 +115,35 @@ MathJax.Hub.Config({
<a href="#" class="dropdown-toggle" data-toggle="dropdown">Contents <b class="caret"></b></a>
<ul class="dropdown-menu">
<!-- navigation toc: --> <li><a href="._week46-bs001.html#___sec0" style="font-size: 80%;">Overview of week 46</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs002.html#___sec1" style="font-size: 80%;">Support Vector Machines, overarching aims</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs003.html#___sec2" style="font-size: 80%;">Hyperplanes and all that</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs004.html#___sec3" style="font-size: 80%;">What is a hyperplane?</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs005.html#___sec4" style="font-size: 80%;">A \( p \)-dimensional space of features</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs006.html#___sec5" style="font-size: 80%;">The two-dimensional case</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs007.html#___sec6" style="font-size: 80%;">Getting into the details</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs008.html#___sec7" style="font-size: 80%;">First attempt at a minimization approach</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs009.html#___sec8" style="font-size: 80%;">Solving the equations</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs010.html#___sec9" style="font-size: 80%;">Code Example</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs011.html#___sec10" style="font-size: 80%;">Problems with the Simpler Approach</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs012.html#___sec11" style="font-size: 80%;">A better approach</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs013.html#___sec12" style="font-size: 80%;">A quick Reminder on Lagrangian Multipliers</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs014.html#___sec13" style="font-size: 80%;">Adding the Multiplier</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs015.html#___sec14" style="font-size: 80%;">Setting up the Problem</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs016.html#___sec15" style="font-size: 80%;">The problem to solve</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs017.html#___sec16" style="font-size: 80%;">The last steps</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs018.html#___sec17" style="font-size: 80%;">A soft classifier</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs019.html#___sec18" style="font-size: 80%;">Soft optmization problem</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs020.html#___sec19" style="font-size: 80%;">Kernels and non-linearity</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs021.html#___sec20" style="font-size: 80%;">The equations</a></li>
<!-- navigation toc: --> <li><a href="#___sec21" style="font-size: 80%;">The problem to solve</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs023.html#___sec22" style="font-size: 80%;">Different kernels and Mercer's theorem</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs024.html#___sec23" style="font-size: 80%;">The moons example</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs025.html#___sec24" style="font-size: 80%;">Mathematical optimization of convex functions</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs026.html#___sec25" style="font-size: 80%;">How do we solve these problems?</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs027.html#___sec26" style="font-size: 80%;">A simple example</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs028.html#___sec27" style="font-size: 80%;">Back to the more realistic cases</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs002.html#___sec1" style="font-size: 80%;">Thursday</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs003.html#___sec2" style="font-size: 80%;">Friday</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs004.html#___sec3" style="font-size: 80%;">Support Vector Machines, overarching aims</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs005.html#___sec4" style="font-size: 80%;">Hyperplanes and all that</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs006.html#___sec5" style="font-size: 80%;">What is a hyperplane?</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs007.html#___sec6" style="font-size: 80%;">A \( p \)-dimensional space of features</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs008.html#___sec7" style="font-size: 80%;">The two-dimensional case</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs009.html#___sec8" style="font-size: 80%;">Getting into the details</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs010.html#___sec9" style="font-size: 80%;">First attempt at a minimization approach</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs011.html#___sec10" style="font-size: 80%;">Solving the equations</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs012.html#___sec11" style="font-size: 80%;">Code Example</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs013.html#___sec12" style="font-size: 80%;">Problems with the Simpler Approach</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs014.html#___sec13" style="font-size: 80%;">A better approach</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs015.html#___sec14" style="font-size: 80%;">A quick Reminder on Lagrangian Multipliers</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs016.html#___sec15" style="font-size: 80%;">Adding the Multiplier</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs017.html#___sec16" style="font-size: 80%;">Setting up the Problem</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs018.html#___sec17" style="font-size: 80%;">The problem to solve</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs019.html#___sec18" style="font-size: 80%;">The last steps</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs020.html#___sec19" style="font-size: 80%;">A soft classifier</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs021.html#___sec20" style="font-size: 80%;">Soft optmization problem</a></li>
<!-- navigation toc: --> <li><a href="#___sec21" style="font-size: 80%;">Kernels and non-linearity</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs023.html#___sec22" style="font-size: 80%;">The equations</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs024.html#___sec23" style="font-size: 80%;">The problem to solve</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs025.html#___sec24" style="font-size: 80%;">Different kernels and Mercer's theorem</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs026.html#___sec25" style="font-size: 80%;">The moons example</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs027.html#___sec26" style="font-size: 80%;">Mathematical optimization of convex functions</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs028.html#___sec27" style="font-size: 80%;">How do we solve these problems?</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs029.html#___sec28" style="font-size: 80%;">A simple example</a></li>
<!-- navigation toc: --> <li><a href="._week46-bs030.html#___sec29" style="font-size: 80%;">Back to the more realistic cases</a></li>
</ul>
</li>
@@ -155,39 +159,76 @@ MathJax.Hub.Config({
<a name="part0022"></a>
<!-- !split -->
<h2 id="___sec21" class="anchor">The problem to solve </h2>
Using our definition of the kernel We can rewrite again the Lagrangian
$$
{\cal L}=\sum_i\lambda_i-\frac{1}{2}\sum_{ij}^n\lambda_i\lambda_jy_iy_j\boldsymbol{x}_i^T\boldsymbol{z}_j,
$$
subject to the constraints \( \lambda_i\geq 0 \), \( \sum_i\lambda_iy_i=0 \) in terms of a convex optimization problem
$$
\frac{1}{2} \boldsymbol{\lambda}^T\begin{bmatrix} y_1y_1K(\boldsymbol{x}_1,\boldsymbol{x}_1) & y_1y_2K(\boldsymbol{x}_1,\boldsymbol{x}_2) & \dots & \dots & y_1y_nK(\boldsymbol{x}_1,\boldsymbol{x}_n) \\
y_2y_1K(\boldsymbol{x}_2,\boldsymbol{x}_1) & y_2y_2(\boldsymbol{x}_2,\boldsymbol{x}_2) & \dots & \dots & y_1y_nK(\boldsymbol{x}_2,\boldsymbol{x}_n) \\
\dots & \dots & \dots & \dots & \dots \\
\dots & \dots & \dots & \dots & \dots \\
y_ny_1K(\boldsymbol{x}_n,\boldsymbol{x}_1) & y_ny_2K(\boldsymbol{x}_n\boldsymbol{x}_2) & \dots & \dots & y_ny_nK(\boldsymbol{x}_n,\boldsymbol{x}_n) \\
\end{bmatrix}\boldsymbol{\lambda}-\mathbb{1}\boldsymbol{\lambda},
$$
subject to \( \boldsymbol{y}^T\boldsymbol{\lambda}=0 \). Here we defined the vectors \( \boldsymbol{\lambda} =[\lambda_1,\lambda_2,\dots,\lambda_n] \) and
\( \boldsymbol{y}=[y_1,y_2,\dots,y_n] \).
If we add the slack constants this leads to the additional constraint \( 0\leq \lambda_i \leq C \).
<h2 id="___sec21" class="anchor">Kernels and non-linearity </h2>
<p>
We can rewrite this (see the solutions below) in terms of a convex optimization problem of the type
$$
\begin{align*}
&\mathrm{min}_{\lambda}\hspace{0.2cm} \frac{1}{2}\boldsymbol{\lambda}^T\boldsymbol{P}\boldsymbol{\lambda}+\boldsymbol{q}^T\boldsymbol{\lambda},\\ \nonumber
&\mathrm{subject\hspace{0.1cm}to} \hspace{0.2cm} \boldsymbol{G}\boldsymbol{\lambda} \preceq \boldsymbol{h} \hspace{0.2cm} \wedge \boldsymbol{A}\boldsymbol{\lambda}=f.
\end{align*}
$$
The cases we have studied till now, were all characterized by two classes
with a close to linear separability. The classifiers we have described
so far find linear boundaries in our input feature space. It is
possible to make our procedure more flexible by exploring the feature
space using other basis expansions such as higher-order polynomials,
wavelets, splines etc.
Below we discuss how to solve these equations. Here we note that the matrix \( \boldsymbol{P} \) has matrix elements \( p_{ij}=y_iy_jK(\boldsymbol{x}_i,\boldsymbol{x}_j) \).
Given a kernel \( K \) and the targets \( y_i \) this matrix is easy to set up. The constraint \( \boldsymbol{y}^T\boldsymbol{\lambda}=0 \) leads to \( f=0 \) and \( \boldsymbol{A}=\boldsymbol{y} \). How to set up the matrix \( \boldsymbol{G} \) is discussed later. Here note that the inequalities \( 0\leq \lambda_i \leq C \) can be split up into
\( 0\leq \lambda_i \) and \( \lambda_i \leq C \). These two inequalities define then the matrix \( \boldsymbol{G} \) and the vector \( \boldsymbol{h} \).
<p>
If our feature space is not easy to separate, as shown in the figure
here, we can achieve a better separation by introducing more complex
basis functions. The ideal would be, as shown in the next figure, to, via a specific transformation to
obtain a separation between the classes which is almost linear.
<p>
The change of basis, from \( x\rightarrow z=\phi(x) \) leads to the same type of equations to be solved, except that
we need to introduce for example a polynomial transformation to a two-dimensional training set.
<p>
<!-- code=python (!bc pycod) typeset with pygments style "default" -->
<div class="highlight" style="background: #f8f8f8"><pre style="line-height: 125%"><span></span><span style="color: #008000; font-weight: bold">import</span> <span style="color: #0000FF; font-weight: bold">numpy</span> <span style="color: #008000; font-weight: bold">as</span> <span style="color: #0000FF; font-weight: bold">np</span>
<span style="color: #008000; font-weight: bold">import</span> <span style="color: #0000FF; font-weight: bold">os</span>
np<span style="color: #666666">.</span>random<span style="color: #666666">.</span>seed(<span style="color: #666666">42</span>)
<span style="color: #408080; font-style: italic"># To plot pretty figures</span>
<span style="color: #008000; font-weight: bold">import</span> <span style="color: #0000FF; font-weight: bold">matplotlib</span>
<span style="color: #008000; font-weight: bold">import</span> <span style="color: #0000FF; font-weight: bold">matplotlib.pyplot</span> <span style="color: #008000; font-weight: bold">as</span> <span style="color: #0000FF; font-weight: bold">plt</span>
plt<span style="color: #666666">.</span>rcParams[<span style="color: #BA2121">&#39;axes.labelsize&#39;</span>] <span style="color: #666666">=</span> <span style="color: #666666">14</span>
plt<span style="color: #666666">.</span>rcParams[<span style="color: #BA2121">&#39;xtick.labelsize&#39;</span>] <span style="color: #666666">=</span> <span style="color: #666666">12</span>
plt<span style="color: #666666">.</span>rcParams[<span style="color: #BA2121">&#39;ytick.labelsize&#39;</span>] <span style="color: #666666">=</span> <span style="color: #666666">12</span>
<span style="color: #008000; font-weight: bold">from</span> <span style="color: #0000FF; font-weight: bold">sklearn.svm</span> <span style="color: #008000; font-weight: bold">import</span> SVC
<span style="color: #008000; font-weight: bold">from</span> <span style="color: #0000FF; font-weight: bold">sklearn</span> <span style="color: #008000; font-weight: bold">import</span> datasets
X1D <span style="color: #666666">=</span> np<span style="color: #666666">.</span>linspace(<span style="color: #666666">-4</span>, <span style="color: #666666">4</span>, <span style="color: #666666">9</span>)<span style="color: #666666">.</span>reshape(<span style="color: #666666">-1</span>, <span style="color: #666666">1</span>)
X2D <span style="color: #666666">=</span> np<span style="color: #666666">.</span>c_[X1D, X1D<span style="color: #666666">**2</span>]
y <span style="color: #666666">=</span> np<span style="color: #666666">.</span>array([<span style="color: #666666">0</span>, <span style="color: #666666">0</span>, <span style="color: #666666">1</span>, <span style="color: #666666">1</span>, <span style="color: #666666">1</span>, <span style="color: #666666">1</span>, <span style="color: #666666">1</span>, <span style="color: #666666">0</span>, <span style="color: #666666">0</span>])
plt<span style="color: #666666">.</span>figure(figsize<span style="color: #666666">=</span>(<span style="color: #666666">11</span>, <span style="color: #666666">4</span>))
plt<span style="color: #666666">.</span>subplot(<span style="color: #666666">121</span>)
plt<span style="color: #666666">.</span>grid(<span style="color: #008000; font-weight: bold">True</span>, which<span style="color: #666666">=</span><span style="color: #BA2121">&#39;both&#39;</span>)
plt<span style="color: #666666">.</span>axhline(y<span style="color: #666666">=0</span>, color<span style="color: #666666">=</span><span style="color: #BA2121">&#39;k&#39;</span>)
plt<span style="color: #666666">.</span>plot(X1D[:, <span style="color: #666666">0</span>][y<span style="color: #666666">==0</span>], np<span style="color: #666666">.</span>zeros(<span style="color: #666666">4</span>), <span style="color: #BA2121">&quot;bs&quot;</span>)
plt<span style="color: #666666">.</span>plot(X1D[:, <span style="color: #666666">0</span>][y<span style="color: #666666">==1</span>], np<span style="color: #666666">.</span>zeros(<span style="color: #666666">5</span>), <span style="color: #BA2121">&quot;g^&quot;</span>)
plt<span style="color: #666666">.</span>gca()<span style="color: #666666">.</span>get_yaxis()<span style="color: #666666">.</span>set_ticks([])
plt<span style="color: #666666">.</span>xlabel(<span style="color: #BA2121">r&quot;$x_1$&quot;</span>, fontsize<span style="color: #666666">=20</span>)
plt<span style="color: #666666">.</span>axis([<span style="color: #666666">-4.5</span>, <span style="color: #666666">4.5</span>, <span style="color: #666666">-0.2</span>, <span style="color: #666666">0.2</span>])
plt<span style="color: #666666">.</span>subplot(<span style="color: #666666">122</span>)
plt<span style="color: #666666">.</span>grid(<span style="color: #008000; font-weight: bold">True</span>, which<span style="color: #666666">=</span><span style="color: #BA2121">&#39;both&#39;</span>)
plt<span style="color: #666666">.</span>axhline(y<span style="color: #666666">=0</span>, color<span style="color: #666666">=</span><span style="color: #BA2121">&#39;k&#39;</span>)
plt<span style="color: #666666">.</span>axvline(x<span style="color: #666666">=0</span>, color<span style="color: #666666">=</span><span style="color: #BA2121">&#39;k&#39;</span>)
plt<span style="color: #666666">.</span>plot(X2D[:, <span style="color: #666666">0</span>][y<span style="color: #666666">==0</span>], X2D[:, <span style="color: #666666">1</span>][y<span style="color: #666666">==0</span>], <span style="color: #BA2121">&quot;bs&quot;</span>)
plt<span style="color: #666666">.</span>plot(X2D[:, <span style="color: #666666">0</span>][y<span style="color: #666666">==1</span>], X2D[:, <span style="color: #666666">1</span>][y<span style="color: #666666">==1</span>], <span style="color: #BA2121">&quot;g^&quot;</span>)
plt<span style="color: #666666">.</span>xlabel(<span style="color: #BA2121">r&quot;$x_1$&quot;</span>, fontsize<span style="color: #666666">=20</span>)
plt<span style="color: #666666">.</span>ylabel(<span style="color: #BA2121">r&quot;$x_2$&quot;</span>, fontsize<span style="color: #666666">=20</span>, rotation<span style="color: #666666">=0</span>)
plt<span style="color: #666666">.</span>gca()<span style="color: #666666">.</span>get_yaxis()<span style="color: #666666">.</span>set_ticks([<span style="color: #666666">0</span>, <span style="color: #666666">4</span>, <span style="color: #666666">8</span>, <span style="color: #666666">12</span>, <span style="color: #666666">16</span>])
plt<span style="color: #666666">.</span>plot([<span style="color: #666666">-4.5</span>, <span style="color: #666666">4.5</span>], [<span style="color: #666666">6.5</span>, <span style="color: #666666">6.5</span>], <span style="color: #BA2121">&quot;r--&quot;</span>, linewidth<span style="color: #666666">=3</span>)
plt<span style="color: #666666">.</span>axis([<span style="color: #666666">-4.5</span>, <span style="color: #666666">4.5</span>, <span style="color: #666666">-1</span>, <span style="color: #666666">17</span>])
plt<span style="color: #666666">.</span>subplots_adjust(right<span style="color: #666666">=1</span>)
plt<span style="color: #666666">.</span>show()
</pre></div>
<p>
<p>
<!-- navigation buttons at the bottom of the page -->
@@ -210,6 +251,8 @@ Given a kernel \( K \) and the targets \( y_i \) this matrix is easy to set up.
<li><a href="._week46-bs026.html">27</a></li>
<li><a href="._week46-bs027.html">28</a></li>
<li><a href="._week46-bs028.html">29</a></li>
<li><a href="._week46-bs029.html">30</a></li>
<li><a href="._week46-bs030.html">31</a></li>
<li><a href="._week46-bs023.html">&raquo;</a></li>
</ul>
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