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testting codes

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Morten Hjorth-Jensen
2021-09-21 10:54:28 +02:00
parent ca4dc3db8b
commit 249454d2dc
11 changed files with 129 additions and 36 deletions
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doc/pub/week38/html/._week38-bs000.html
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@@ -253,7 +253,7 @@ MathJax.Hub.Config({
<center>[2] <b>Department of Physics and Astronomy and National Superconducting Cyclotron Laboratory, Michigan State University</b></center>
<br>
<p>
<center><h4>Sep 20, 2021</h4></center> <!-- date -->
<center><h4>Sep 21, 2021</h4></center> <!-- date -->
<br>
<p>
doc/pub/week38/html/._week38-bs007.html
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@@ -238,7 +238,7 @@ MathJax.Hub.Config({
<p>
When you are comparing your own code with for example <b>Scikit-Learn</b>'s library, there are some minor things to keep in mind.
The example here shows how one can leave out or keep the intercept.
The example here shows how one can keep the intercept in order to compare own code.
<p>
@@ -319,10 +319,10 @@ lambdas <span style="color: #666666">=</span> np<span style="color: #666666">.</
<span style="color: #008000">print</span>(RegRidge<span style="color: #666666">.</span>coef_)
<span style="color: #408080; font-style: italic"># Now plot the results</span>
plt<span style="color: #666666">.</span>figure()
plt<span style="color: #666666">.</span>plot(np<span style="color: #666666">.</span>log10(lambdas), MSEOwnRidgeTrain, label <span style="color: #666666">=</span> <span style="color: #BA2121">&#39;MSE Ridge train&#39;</span>)
plt<span style="color: #666666">.</span>plot(np<span style="color: #666666">.</span>log10(lambdas), MSEOwnRidgePredict, <span style="color: #BA2121">&#39;r--&#39;</span>, label <span style="color: #666666">=</span> <span style="color: #BA2121">&#39;MSE Ridge Test&#39;</span>)
plt<span style="color: #666666">.</span>plot(np<span style="color: #666666">.</span>log10(lambdas), MSERidgeTrain, label <span style="color: #666666">=</span> <span style="color: #BA2121">&#39;MSE Ridge train&#39;</span>)
plt<span style="color: #666666">.</span>plot(np<span style="color: #666666">.</span>log10(lambdas), MSERidgePredict, <span style="color: #BA2121">&#39;r--&#39;</span>, label <span style="color: #666666">=</span> <span style="color: #BA2121">&#39;MSE Ridge Test&#39;</span>)
plt<span style="color: #666666">.</span>plot(np<span style="color: #666666">.</span>log10(lambdas), MSEOwnRidgeTrain, <span style="color: #BA2121">&#39;b&#39;</span>, label <span style="color: #666666">=</span> <span style="color: #BA2121">&#39;MSE Ridge train&#39;</span>)
plt<span style="color: #666666">.</span>plot(np<span style="color: #666666">.</span>log10(lambdas), MSEOwnRidgePredict, <span style="color: #BA2121">&#39;r&#39;</span>, label <span style="color: #666666">=</span> <span style="color: #BA2121">&#39;MSE Ridge Test&#39;</span>)
plt<span style="color: #666666">.</span>plot(np<span style="color: #666666">.</span>log10(lambdas), MSERidgeTrain, <span style="color: #BA2121">&#39;y&#39;</span>, label <span style="color: #666666">=</span> <span style="color: #BA2121">&#39;MSE Ridge train&#39;</span>)
plt<span style="color: #666666">.</span>plot(np<span style="color: #666666">.</span>log10(lambdas), MSERidgePredict, <span style="color: #BA2121">&#39;g&#39;</span>, label <span style="color: #666666">=</span> <span style="color: #BA2121">&#39;MSE Ridge Test&#39;</span>)
plt<span style="color: #666666">.</span>xlabel(<span style="color: #BA2121">&#39;log10(lambda)&#39;</span>)
plt<span style="color: #666666">.</span>ylabel(<span style="color: #BA2121">&#39;MSE&#39;</span>)
doc/pub/week38/html/week38-bs.html
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@@ -253,7 +253,7 @@ MathJax.Hub.Config({
<center>[2] <b>Department of Physics and Astronomy and National Superconducting Cyclotron Laboratory, Michigan State University</b></center>
<br>
<p>
<center><h4>Sep 20, 2021</h4></center> <!-- date -->
<center><h4>Sep 21, 2021</h4></center> <!-- date -->
<br>
<p>
doc/pub/week38/html/week38-reveal.html
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@@ -148,7 +148,7 @@ MathJax.Hub.Config({
<center>[2] <b>Department of Physics and Astronomy and National Superconducting Cyclotron Laboratory, Michigan State University</b></center>
<br>
<p>&nbsp;<br>
<center><h4>Sep 20, 2021</h4></center> <!-- date -->
<center><h4>Sep 21, 2021</h4></center> <!-- date -->
<br>
<p>
@@ -423,7 +423,7 @@ plt.show()
<p>
When you are comparing your own code with for example <b>Scikit-Learn</b>'s library, there are some minor things to keep in mind.
The example here shows how one can leave out or keep the intercept.
The example here shows how one can keep the intercept in order to compare own code.
<p>
@@ -504,10 +504,10 @@ lambdas = np.logspace(-<span style="color: #B452CD">4</span>, <span style="color
<span style="color: #658b00">print</span>(RegRidge.coef_)
<span style="color: #228B22"># Now plot the results</span>
plt.figure()
plt.plot(np.log10(lambdas), MSEOwnRidgeTrain, label = <span style="color: #CD5555">&#39;MSE Ridge train&#39;</span>)
plt.plot(np.log10(lambdas), MSEOwnRidgePredict, <span style="color: #CD5555">&#39;r--&#39;</span>, label = <span style="color: #CD5555">&#39;MSE Ridge Test&#39;</span>)
plt.plot(np.log10(lambdas), MSERidgeTrain, label = <span style="color: #CD5555">&#39;MSE Ridge train&#39;</span>)
plt.plot(np.log10(lambdas), MSERidgePredict, <span style="color: #CD5555">&#39;r--&#39;</span>, label = <span style="color: #CD5555">&#39;MSE Ridge Test&#39;</span>)
plt.plot(np.log10(lambdas), MSEOwnRidgeTrain, <span style="color: #CD5555">&#39;b&#39;</span>, label = <span style="color: #CD5555">&#39;MSE Ridge train&#39;</span>)
plt.plot(np.log10(lambdas), MSEOwnRidgePredict, <span style="color: #CD5555">&#39;r&#39;</span>, label = <span style="color: #CD5555">&#39;MSE Ridge Test&#39;</span>)
plt.plot(np.log10(lambdas), MSERidgeTrain, <span style="color: #CD5555">&#39;y&#39;</span>, label = <span style="color: #CD5555">&#39;MSE Ridge train&#39;</span>)
plt.plot(np.log10(lambdas), MSERidgePredict, <span style="color: #CD5555">&#39;g&#39;</span>, label = <span style="color: #CD5555">&#39;MSE Ridge Test&#39;</span>)
plt.xlabel(<span style="color: #CD5555">&#39;log10(lambda)&#39;</span>)
plt.ylabel(<span style="color: #CD5555">&#39;MSE&#39;</span>)
doc/pub/week38/html/week38-solarized.html
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@@ -179,7 +179,7 @@ MathJax.Hub.Config({
<center>[2] <b>Department of Physics and Astronomy and National Superconducting Cyclotron Laboratory, Michigan State University</b></center>
<br>
<p>
<center><h4>Sep 20, 2021</h4></center> <!-- date -->
<center><h4>Sep 21, 2021</h4></center> <!-- date -->
<br>
<p>
<!-- !split --><br><br><br><br><br><br><br><br><br><br>
@@ -430,7 +430,7 @@ plt.show()
<p>
When you are comparing your own code with for example <b>Scikit-Learn</b>'s library, there are some minor things to keep in mind.
The example here shows how one can leave out or keep the intercept.
The example here shows how one can keep the intercept in order to compare own code.
<p>
@@ -511,10 +511,10 @@ lambdas = np.logspace(-<span style="color: #B452CD">4</span>, <span style="color
<span style="color: #658b00">print</span>(RegRidge.coef_)
<span style="color: #228B22"># Now plot the results</span>
plt.figure()
plt.plot(np.log10(lambdas), MSEOwnRidgeTrain, label = <span style="color: #CD5555">&#39;MSE Ridge train&#39;</span>)
plt.plot(np.log10(lambdas), MSEOwnRidgePredict, <span style="color: #CD5555">&#39;r--&#39;</span>, label = <span style="color: #CD5555">&#39;MSE Ridge Test&#39;</span>)
plt.plot(np.log10(lambdas), MSERidgeTrain, label = <span style="color: #CD5555">&#39;MSE Ridge train&#39;</span>)
plt.plot(np.log10(lambdas), MSERidgePredict, <span style="color: #CD5555">&#39;r--&#39;</span>, label = <span style="color: #CD5555">&#39;MSE Ridge Test&#39;</span>)
plt.plot(np.log10(lambdas), MSEOwnRidgeTrain, <span style="color: #CD5555">&#39;b&#39;</span>, label = <span style="color: #CD5555">&#39;MSE Ridge train&#39;</span>)
plt.plot(np.log10(lambdas), MSEOwnRidgePredict, <span style="color: #CD5555">&#39;r&#39;</span>, label = <span style="color: #CD5555">&#39;MSE Ridge Test&#39;</span>)
plt.plot(np.log10(lambdas), MSERidgeTrain, <span style="color: #CD5555">&#39;y&#39;</span>, label = <span style="color: #CD5555">&#39;MSE Ridge train&#39;</span>)
plt.plot(np.log10(lambdas), MSERidgePredict, <span style="color: #CD5555">&#39;g&#39;</span>, label = <span style="color: #CD5555">&#39;MSE Ridge Test&#39;</span>)
plt.xlabel(<span style="color: #CD5555">&#39;log10(lambda)&#39;</span>)
plt.ylabel(<span style="color: #CD5555">&#39;MSE&#39;</span>)
doc/pub/week38/html/week38.html
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@@ -184,7 +184,7 @@ MathJax.Hub.Config({
<center>[2] <b>Department of Physics and Astronomy and National Superconducting Cyclotron Laboratory, Michigan State University</b></center>
<br>
<p>
<center><h4>Sep 20, 2021</h4></center> <!-- date -->
<center><h4>Sep 21, 2021</h4></center> <!-- date -->
<br>
<p>
<!-- !split --><br><br><br><br><br><br><br><br><br><br>
@@ -435,7 +435,7 @@ plt<span style="color: #666666">.</span>show()
<p>
When you are comparing your own code with for example <b>Scikit-Learn</b>'s library, there are some minor things to keep in mind.
The example here shows how one can leave out or keep the intercept.
The example here shows how one can keep the intercept in order to compare own code.
<p>
@@ -516,10 +516,10 @@ lambdas <span style="color: #666666">=</span> np<span style="color: #666666">.</
<span style="color: #008000">print</span>(RegRidge<span style="color: #666666">.</span>coef_)
<span style="color: #408080; font-style: italic"># Now plot the results</span>
plt<span style="color: #666666">.</span>figure()
plt<span style="color: #666666">.</span>plot(np<span style="color: #666666">.</span>log10(lambdas), MSEOwnRidgeTrain, label <span style="color: #666666">=</span> <span style="color: #BA2121">&#39;MSE Ridge train&#39;</span>)
plt<span style="color: #666666">.</span>plot(np<span style="color: #666666">.</span>log10(lambdas), MSEOwnRidgePredict, <span style="color: #BA2121">&#39;r--&#39;</span>, label <span style="color: #666666">=</span> <span style="color: #BA2121">&#39;MSE Ridge Test&#39;</span>)
plt<span style="color: #666666">.</span>plot(np<span style="color: #666666">.</span>log10(lambdas), MSERidgeTrain, label <span style="color: #666666">=</span> <span style="color: #BA2121">&#39;MSE Ridge train&#39;</span>)
plt<span style="color: #666666">.</span>plot(np<span style="color: #666666">.</span>log10(lambdas), MSERidgePredict, <span style="color: #BA2121">&#39;r--&#39;</span>, label <span style="color: #666666">=</span> <span style="color: #BA2121">&#39;MSE Ridge Test&#39;</span>)
plt<span style="color: #666666">.</span>plot(np<span style="color: #666666">.</span>log10(lambdas), MSEOwnRidgeTrain, <span style="color: #BA2121">&#39;b&#39;</span>, label <span style="color: #666666">=</span> <span style="color: #BA2121">&#39;MSE Ridge train&#39;</span>)
plt<span style="color: #666666">.</span>plot(np<span style="color: #666666">.</span>log10(lambdas), MSEOwnRidgePredict, <span style="color: #BA2121">&#39;r&#39;</span>, label <span style="color: #666666">=</span> <span style="color: #BA2121">&#39;MSE Ridge Test&#39;</span>)
plt<span style="color: #666666">.</span>plot(np<span style="color: #666666">.</span>log10(lambdas), MSERidgeTrain, <span style="color: #BA2121">&#39;y&#39;</span>, label <span style="color: #666666">=</span> <span style="color: #BA2121">&#39;MSE Ridge train&#39;</span>)
plt<span style="color: #666666">.</span>plot(np<span style="color: #666666">.</span>log10(lambdas), MSERidgePredict, <span style="color: #BA2121">&#39;g&#39;</span>, label <span style="color: #666666">=</span> <span style="color: #BA2121">&#39;MSE Ridge Test&#39;</span>)
plt<span style="color: #666666">.</span>xlabel(<span style="color: #BA2121">&#39;log10(lambda)&#39;</span>)
plt<span style="color: #666666">.</span>ylabel(<span style="color: #BA2121">&#39;MSE&#39;</span>)
doc/pub/week38/ipynb/ipynb-week38-src.tar.gz
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doc/pub/week38/ipynb/week38.ipynb
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@@ -10,7 +10,7 @@
"<!-- Author: --> \n",
"**Morten Hjorth-Jensen**, Department of Physics, University of Oslo and Department of Physics and Astronomy and National Superconducting Cyclotron Laboratory, Michigan State University\n",
"\n",
"Date: **Sep 20, 2021**\n",
"Date: **Sep 21, 2021**\n",
"\n",
"Copyright 1999-2021, Morten Hjorth-Jensen. Released under CC Attribution-NonCommercial 4.0 license\n",
"\n",
@@ -350,7 +350,7 @@
"## To think about\n",
"\n",
"When you are comparing your own code with for example **Scikit-Learn**'s library, there are some minor things to keep in mind.\n",
"The example here shows how one can leave out or keep the intercept."
"The example here shows how one can keep the intercept in order to compare own code."
]
},
{
@@ -438,10 +438,10 @@
" print(RegRidge.coef_)\n",
"# Now plot the results\n",
"plt.figure()\n",
"plt.plot(np.log10(lambdas), MSEOwnRidgeTrain, label = 'MSE Ridge train')\n",
"plt.plot(np.log10(lambdas), MSEOwnRidgePredict, 'r--', label = 'MSE Ridge Test')\n",
"plt.plot(np.log10(lambdas), MSERidgeTrain, label = 'MSE Ridge train')\n",
"plt.plot(np.log10(lambdas), MSERidgePredict, 'r--', label = 'MSE Ridge Test')\n",
"plt.plot(np.log10(lambdas), MSEOwnRidgeTrain, 'b', label = 'MSE Ridge train')\n",
"plt.plot(np.log10(lambdas), MSEOwnRidgePredict, 'r', label = 'MSE Ridge Test')\n",
"plt.plot(np.log10(lambdas), MSERidgeTrain, 'y', label = 'MSE Ridge train')\n",
"plt.plot(np.log10(lambdas), MSERidgePredict, 'g', label = 'MSE Ridge Test')\n",
"\n",
"plt.xlabel('log10(lambda)')\n",
"plt.ylabel('MSE')\n",