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Fix pipeline attempt (1)

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This commit is contained in:
Kylian Schmidt
2025-09-08 14:52:21 +02:00
parent 802fee1337
commit fe5a7e6815
1 changed files with 9 additions and 15 deletions
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.gitlab-ci.yml
+9 -15
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@@ -21,11 +21,9 @@ build:container:
image: ubuntu:22.04
before_script:
- apt-get update -qq
- apt-get install -y wget
- wget -O- http://neuro.debian.net/lists/jammy.us-ca.full | tee /etc/apt/sources.list.d/neurodebian.sources.list
- apt-key adv --recv-keys --keyserver hkps://keyserver.ubuntu.com 0xA5D32F012649A5A9
- apt-get update -qq
- apt-get install -y apptainer
- apt-get install -y wget curl gpg
- wget -O /tmp/apptainer.deb https://github.com/apptainer/apptainer/releases/download/v1.2.5/apptainer_1.2.5_amd64.deb
- apt-get install -y /tmp/apptainer.deb
- mkdir -p $APPTAINER_CACHE_DIR
script:
- echo "Building Apptainer container..."
@@ -45,11 +43,9 @@ test:pytest:
- build:container
before_script:
- apt-get update -qq
- apt-get install -y wget
- wget -O- http://neuro.debian.net/lists/jammy.us-ca.full | tee /etc/apt/sources.list.d/neurodebian.sources.list
- apt-key adv --recv-keys --keyserver hkps://keyserver.ubuntu.com 0xA5D32F012649A5A9
- apt-get update -qq
- apt-get install -y apptainer
- apt-get install -y wget curl gpg
- wget -O /tmp/apptainer.deb https://github.com/apptainer/apptainer/releases/download/v1.2.5/apptainer_1.2.5_amd64.deb
- apt-get install -y /tmp/apptainer.deb
script:
- echo "Running pytest inside container..."
- apptainer exec $CONTAINER_IMAGE pytest /src/tests/ -v
@@ -64,11 +60,9 @@ test:coverage:
- build:container
before_script:
- apt-get update -qq
- apt-get install -y wget
- wget -O- http://neuro.debian.net/lists/jammy.us-ca.full | tee /etc/apt/sources.list.d/neurodebian.sources.list
- apt-key adv --recv-keys --keyserver hkps://keyserver.ubuntu.com 0xA5D32F012649A5A9
- apt-get update -qq
- apt-get install -y apptainer
- apt-get install -y wget curl gpg
- wget -O /tmp/apptainer.deb https://github.com/apptainer/apptainer/releases/download/v1.2.5/apptainer_1.2.5_amd64.deb
- apt-get install -y /tmp/apptainer.deb
script:
- echo "Running coverage analysis inside container..."
- apptainer exec $CONTAINER_IMAGE pytest /src/tests/ --cov=/src --cov-report=xml --cov-report=term